FirstGlance/Index
From Proteopedia
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*[[How to see conserved regions]] includes a section on FirstGlance. | *[[How to see conserved regions]] includes a section on FirstGlance. | ||
*[[Interpreting ConSurf Results]] discusses advantages of using FirstGlance. | *[[Interpreting ConSurf Results]] discusses advantages of using FirstGlance. | ||
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*[[Practical Guide to Homology Modeling]] a section on visualizing predicted structures in FirstGlance. | *[[Practical Guide to Homology Modeling]] a section on visualizing predicted structures in FirstGlance. | ||
| - | *[[Protein crosslinks]]: FirstGlance automatically detects and alerts you to | + | *[[Protein crosslinks]]: FirstGlance automatically detects and alerts you to six unusual types. |
*[[Salt bridges]] mentions that FirstGlance has a tool to display these easily. | *[[Salt bridges]] mentions that FirstGlance has a tool to display these easily. | ||
*[[User:Eric Martz/Introduction to Structural Bioinformatics|Introduction to Structural Bioinformatics]]: Syllabi and assessment tools based heavily on use of FirstGlance by students. | *[[User:Eric Martz/Introduction to Structural Bioinformatics|Introduction to Structural Bioinformatics]]: Syllabi and assessment tools based heavily on use of FirstGlance by students. | ||
Revision as of 23:39, 30 December 2021
A list of pages and resources related to FirstGlance in Jmol:
Proteopedia Pages
- FirstGlance in Jmol - Overview of the software package and its integration into Proteopedia.
- AlphaFold: How to predict structures has a section on the advantages of visualization of predicted structures in FirstGlance.
- Biological Unit tells how to visualize the biological unit in FirstGlance.
- Cation-pi interactions mentions that FirstGlance has a tool to display these easily.
- ConSurf Quick Analysis Procedure mentions using FirstGlance to visualize ConSurf results.
- Disulfide bond mentions FirstGlance's tool that highlights these and quantitates all sulfurs and seleniums.
- Electron density maps mentions how easy it is to see them in FirstGlance, and provides animated illustrations from FirstGlance.
- FirstGlance/Evaluating Protein Crosslinks
- Free R tells how FirstGlance helps to interpret free R.
- Help:Copying FirstGlance Scenes into Proteopedia
- Hydrogen bonds describes the Contacts & Non-Covalent Interactions tool in FirstGlance.
- How to see conserved regions includes a section on FirstGlance.
- Interpreting ConSurf Results discusses advantages of using FirstGlance.
- Practical Guide to Homology Modeling a section on visualizing predicted structures in FirstGlance.
- Protein crosslinks: FirstGlance automatically detects and alerts you to six unusual types.
- Salt bridges mentions that FirstGlance has a tool to display these easily.
- Introduction to Structural Bioinformatics: Syllabi and assessment tools based heavily on use of FirstGlance by students.
- Temperature value mentions the use of FirstGlance to color by temperature, and to list missing residues and incomplete sidechains.
External Resources
- FirstGlance.Jmol.Org: the software package itself.
