This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1d9m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:43, 22 November 2023) (edit) (undo)
 
Line 1: Line 1:
==SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2 HYBRID PEPTIDE ANALOGUE(P2)==
==SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2 HYBRID PEPTIDE ANALOGUE(P2)==
-
<StructureSection load='1d9m' size='340' side='right'caption='[[1d9m]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='1d9m' size='340' side='right'caption='[[1d9m]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1d9m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cecropia_moth Cecropia moth]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D9M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D9M FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1d9m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Hyalophora_cecropia Hyalophora cecropia] and [https://en.wikipedia.org/wiki/Xenopus_laevis Xenopus laevis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D9M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D9M FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1d9j|1d9j]], [[1d9l|1d9l]], [[1d9o|1d9o]], [[1d9p|1d9p]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d9m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d9m OCA], [https://pdbe.org/1d9m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d9m RCSB], [https://www.ebi.ac.uk/pdbsum/1d9m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d9m ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d9m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d9m OCA], [https://pdbe.org/1d9m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d9m RCSB], [https://www.ebi.ac.uk/pdbsum/1d9m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d9m ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/CECA_HYACE CECA_HYACE]] Cecropins have lytic and antibacterial activity against several Gram-positive and Gram-negative bacteria.
+
[https://www.uniprot.org/uniprot/MAGA_XENLA MAGA_XENLA] Antimicrobial peptides that inhibit the growth of numerous species of bacteria and fungi and induce osmotic lysis of protozoa. Magainins are membrane lytic agents.[https://www.uniprot.org/uniprot/CECA_HYACE CECA_HYACE] Cecropins have lytic and antibacterial activity against several Gram-positive and Gram-negative bacteria.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 26: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Cecropia moth]]
+
[[Category: Hyalophora cecropia]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Kim, Y]]
+
[[Category: Xenopus laevis]]
-
[[Category: Oh, D]]
+
[[Category: Kim Y]]
-
[[Category: Helix-hinge-helix]]
+
[[Category: Oh D]]
-
[[Category: Membrane protein]]
+

Current revision

SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2 HYBRID PEPTIDE ANALOGUE(P2)

PDB ID 1d9m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools