This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3zeb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:00, 20 December 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==A complex of GlpG with isocoumarin inhibitor covalently bonded to serine 201 and histidine 150==
==A complex of GlpG with isocoumarin inhibitor covalently bonded to serine 201 and histidine 150==
-
<StructureSection load='3zeb' size='340' side='right' caption='[[3zeb]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+
<StructureSection load='3zeb' size='340' side='right'caption='[[3zeb]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3zeb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_bl21(de3) Escherichia coli bl21(de3)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZEB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZEB FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3zeb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_BL21(DE3) Escherichia coli BL21(DE3)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZEB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZEB FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BNG:B-NONYLGLUCOSIDE'>BNG</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SV1:2-PHENYLETHYL+2-(4-AZANYL-2-METHANOYL-PHENYL)ETHANOATE'>SV1</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Rhomboid_protease Rhomboid protease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.105 3.4.21.105] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BNG:B-NONYLGLUCOSIDE'>BNG</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SV1:2-PHENYLETHYL+2-(4-AZANYL-2-METHANOYL-PHENYL)ETHANOATE'>SV1</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zeb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zeb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zeb RCSB], [http://www.ebi.ac.uk/pdbsum/3zeb PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zeb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zeb OCA], [https://pdbe.org/3zeb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zeb RCSB], [https://www.ebi.ac.uk/pdbsum/3zeb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zeb ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/GLPG_ECOLI GLPG_ECOLI]] Rhomboid-type serine protease that catalyzes intramembrane proteolysis.<ref>PMID:17099694</ref> <ref>PMID:16216077</ref>
+
[https://www.uniprot.org/uniprot/GLPG_ECOLI GLPG_ECOLI] Rhomboid-type serine protease that catalyzes intramembrane proteolysis.<ref>PMID:17099694</ref> <ref>PMID:16216077</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 18:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 3zeb" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
Line 24: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Rhomboid protease]]
+
[[Category: Large Structures]]
-
[[Category: Brouwer, A J]]
+
[[Category: Brouwer AJ]]
-
[[Category: Kuettler, E V]]
+
[[Category: Kuettler EV]]
-
[[Category: Liskamp, R M.J]]
+
[[Category: Liskamp RMJ]]
-
[[Category: Verhelst, S H.L]]
+
[[Category: Verhelst SHL]]
-
[[Category: Vinothkumar, K R]]
+
[[Category: Vinothkumar KR]]
-
[[Category: Voskya, O]]
+
[[Category: Voskya O]]
-
[[Category: Acyl enzyme]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Intra-membrane protease]]
+
-
[[Category: Serine protease]]
+

Current revision

A complex of GlpG with isocoumarin inhibitor covalently bonded to serine 201 and histidine 150

PDB ID 3zeb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3zeb"
Personal tools