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3iyx

From Proteopedia

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Current revision (10:08, 21 February 2024) (edit) (undo)
 
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[[Image:3iyx.png|left|200px]]
 
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{{STRUCTURE_3iyx| PDB=3iyx | SCENE= }}
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==Coordinates of the b1b bridge-forming protein structures fitted into the Cryo-EM map of E.coli 70S ribosome (EMD-1056)==
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<SX load='3iyx' size='340' side='right' viewer='molstar' caption='[[3iyx]], [[Resolution|resolution]] 9.00&Aring;' scene=''>
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===Coordinates of the b1b bridge-forming protein structures fitted into the Cryo-EM map of E.coli 70S ribosome (EMD-1056)===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3iyx]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_O55:H7_str._CB9615 Escherichia coli O55:H7 str. CB9615]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IYX FirstGlance]. <br>
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{{ABSTRACT_PUBMED_20643101}}
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 9&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iyx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iyx OCA], [https://pdbe.org/3iyx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iyx RCSB], [https://www.ebi.ac.uk/pdbsum/3iyx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iyx ProSAT]</span></td></tr>
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==About this Structure==
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</table>
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[[3iyx]] is a 3 chain structure of [[Ribosomal protein L31]], [[Ribosomal protein L5]] and [[Ribosomal protein S13]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYX OCA].
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iy/3iyx_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iyx ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[Ribosomal protein L5|Ribosomal protein L5]]
*[[Ribosomal protein L5|Ribosomal protein L5]]
*[[Ribosomal protein S13|Ribosomal protein S13]]
*[[Ribosomal protein S13|Ribosomal protein S13]]
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__TOC__
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==Reference==
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</SX>
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<ref group="xtra">PMID:020643101</ref><references group="xtra"/>
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[[Category: Escherichia coli O55:H7 str. CB9615]]
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[[Category: Escherichia coli]]
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[[Category: Large Structures]]
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[[Category: Chakraborty, B.]]
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[[Category: Chakraborty B]]
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[[Category: Sengupta, J.]]
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[[Category: Sengupta J]]
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[[Category: Shasmal, M.]]
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[[Category: Shasmal M]]
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[[Category: B1b-bridge]]
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[[Category: Ratchet-like motion]]
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[[Category: Ribosomal intersubunit bridge]]
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[[Category: Ribosomal protein]]
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[[Category: Ribosomal protein l31]]
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Current revision

Coordinates of the b1b bridge-forming protein structures fitted into the Cryo-EM map of E.coli 70S ribosome (EMD-1056)

3iyx, resolution 9.00Å

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