This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3txm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:15, 1 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3txm.png|left|200px]]
 
-
<!--
+
==Crystal structure of Rpn6 from Drosophila melanogaster, Gd(3+) complex==
-
The line below this paragraph, containing "STRUCTURE_3txm", creates the "Structure Box" on the page.
+
<StructureSection load='3txm' size='340' side='right'caption='[[3txm]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3txm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TXM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TXM FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GD3:GADOLINIUM+ION'>GD3</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3txm| PDB=3txm | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3txm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3txm OCA], [https://pdbe.org/3txm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3txm RCSB], [https://www.ebi.ac.uk/pdbsum/3txm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3txm ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PSD11_DROME PSD11_DROME] Component of the lid subcomplex of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. In the complex, RPN6 is required for proteasome assembly (By similarity). May act as linker between 19S regulatory subunit and the 20S proteasome core.<ref>PMID:22187461</ref>
-
===Crystal structure of Rpn6 from Drosophila melanogaster, Gd(3+) complex===
+
==See Also==
-
 
+
*[[Proteasome 3D structures|Proteasome 3D structures]]
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_22187461}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 22187461 is the PubMed ID number.
+
</StructureSection>
-
-->
+
-
{{ABSTRACT_PUBMED_22187461}}
+
-
 
+
-
==About this Structure==
+
-
[[3txm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TXM OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:022187461</ref><references group="xtra"/>
+
[[Category: Drosophila melanogaster]]
[[Category: Drosophila melanogaster]]
-
[[Category: Bracher, A.]]
+
[[Category: Large Structures]]
-
[[Category: Pathare, G R.]]
+
[[Category: Bracher A]]
-
[[Category: 26 s proteasome]]
+
[[Category: Pathare GR]]
-
[[Category: Alpha solenoid]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Lid]]
+
-
[[Category: Pci domain]]
+
-
[[Category: Protein binding]]
+
-
[[Category: Regulatory particle]]
+

Current revision

Crystal structure of Rpn6 from Drosophila melanogaster, Gd(3+) complex

PDB ID 3txm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools