This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2bei

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:21, 22 May 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2bei.jpg|left|200px]]
 
-
{{Structure
+
==X-ray structure of thialysine n-acetyltransferase (SSAT2) from homo sapiens==
-
|PDB= 2bei |SIZE=350|CAPTION= <scene name='initialview01'>2bei</scene>, resolution 1.842&Aring;
+
<StructureSection load='2bei' size='340' side='right'caption='[[2bei]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=ACO:ACETYL+COENZYME+*A'>ACO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2bei]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BEI FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Diamine_N-acetyltransferase Diamine N-acetyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.57 2.3.1.57] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.842&#8491;</td></tr>
-
|GENE= SAT2, SSAT2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACO:ACETYL+COENZYME+*A'>ACO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1246 ArgA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00583 Acetyltransf_1]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bei OCA], [https://pdbe.org/2bei PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bei RCSB], [https://www.ebi.ac.uk/pdbsum/2bei PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bei ProSAT], [https://www.topsan.org/Proteins/CESG/2bei TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bei OCA], [http://www.ebi.ac.uk/pdbsum/2bei PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2bei RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/SAT2_HUMAN SAT2_HUMAN] Enzyme which catalyzes the acetylation of polyamines. Substrate specificity: norspermidine > spermidine = spermine >> N(1)acetylspermine = putrescine.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/2bei_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bei ConSurf].
 +
<div style="clear:both"></div>
-
'''X-ray structure of thialysine n-acetyltransferase (SSAT2) from homo sapiens'''
+
==See Also==
-
 
+
*[[Spermidine/spermine N-acetyltransferase|Spermidine/spermine N-acetyltransferase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2BEI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEI OCA].
+
-
 
+
-
==Reference==
+
-
Crystal structure of Homo sapiens thialysine Nepsilon-acetyltransferase (HsSSAT2) in complex with acetyl coenzyme A., Han BW, Bingman CA, Wesenberg GE, Phillips GN Jr, Proteins. 2006 Jul 1;64(1):288-93. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16596569 16596569]
+
-
[[Category: Diamine N-acetyltransferase]]
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Bae, E.]]
+
[[Category: Bae E]]
-
[[Category: Bingman, C A.]]
+
[[Category: Bingman CA]]
-
[[Category: Bitto, E.]]
+
[[Category: Bitto E]]
-
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
+
[[Category: Han BW]]
-
[[Category: Han, B W.]]
+
[[Category: Phillips Jr GN]]
-
[[Category: Jr., G N.Phillips.]]
+
[[Category: Wesenberg GE]]
-
[[Category: Wesenberg, G E.]]
+
-
[[Category: aah11751]]
+
-
[[Category: bc011751]]
+
-
[[Category: center for eukaryotic structural genomic]]
+
-
[[Category: cesg]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: ssat2]]
+
-
[[Category: structural genomic]]
+
-
[[Category: thialysine n-acetyltransferase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:05:15 2008''
+

Current revision

X-ray structure of thialysine n-acetyltransferase (SSAT2) from homo sapiens

PDB ID 2bei

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools