4r02

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==yCP in complex with BSc4999 (alpha-Keto Phenylamide)==
==yCP in complex with BSc4999 (alpha-Keto Phenylamide)==
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<StructureSection load='4r02' size='340' side='right' caption='[[4r02]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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<StructureSection load='4r02' size='340' side='right'caption='[[4r02]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4r02]] is a 28 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R02 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4R02 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4r02]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R02 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4R02 FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3E5:N-[(BENZYLOXY)CARBONYL]-L-LEUCYL-N-{(2S,3S)-1-[(2,4-DIMETHYLPHENYL)AMINO]-2-HYDROXY-5-METHYL-1-OXOHEXAN-3-YL}-L-LEUCINAMIDE'>3E5</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4qtr|4qtr]], [[4qux|4qux]], [[4quy|4quy]], [[4qv0|4qv0]], [[4qv1|4qv1]], [[4qv3|4qv3]], [[4qv4|4qv4]], [[4qv5|4qv5]], [[4qv6|4qv6]], [[4qv7|4qv7]], [[4qv8|4qv8]], [[4qv9|4qv9]], [[4qvl|4qvl]], [[4qvm|4qvm]], [[4qvn|4qvn]], [[4qvp|4qvp]], [[4qvq|4qvq]], [[1ryp|1ryp]], [[4qwr|4qwr]], [[4qws|4qws]], [[4qwx|4qwx]], [[4qz0|4qz0]], [[4qz1|4qz1]], [[4qz2|4qz2]], [[4qz3|4qz3]], [[4qz5|4qz5]], [[4qz6|4qz6]], [[4qzx|4qzx]], [[4qzz|4qzz]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3E5:N-[(BENZYLOXY)CARBONYL]-L-LEUCYL-N-{(2S,3S)-1-[(2,4-DIMETHYLPHENYL)AMINO]-2-HYDROXY-5-METHYL-1-OXOHEXAN-3-YL}-L-LEUCINAMIDE'>3E5</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Proteasome_endopeptidase_complex Proteasome endopeptidase complex], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.25.1 3.4.25.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4r02 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r02 OCA], [https://pdbe.org/4r02 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4r02 RCSB], [https://www.ebi.ac.uk/pdbsum/4r02 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4r02 ProSAT]</span></td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r02 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r02 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4r02 RCSB], [http://www.ebi.ac.uk/pdbsum/4r02 PDBsum]</span></td></tr>
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</table>
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<table>
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== Function ==
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[https://www.uniprot.org/uniprot/PSA2_YEAST PSA2_YEAST] The proteasome degrades poly-ubiquitinated proteins in the cytoplasm and in the nucleus. It is essential for the regulated turnover of proteins and for the removal of misfolded proteins. The proteasome is a multicatalytic proteinase complex that is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. It has an ATP-dependent proteolytic activity.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 4r02" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Proteasome 3D structures|Proteasome 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Proteasome endopeptidase complex]]
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[[Category: Large Structures]]
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[[Category: Saccharomyces cerevisiae]]
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[[Category: Saccharomyces cerevisiae S288C]]
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[[Category: Beck, P.]]
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[[Category: Beck P]]
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[[Category: Groll, M.]]
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[[Category: Groll M]]
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[[Category: Hamacher, K.]]
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[[Category: Hamacher K]]
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[[Category: Kloetzel, P M.]]
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[[Category: Kloetzel P-M]]
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[[Category: Knorr, S.]]
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[[Category: Knorr S]]
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[[Category: Kuckelkorn, U.]]
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[[Category: Kuckelkorn U]]
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[[Category: Schmidt, B.]]
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[[Category: Schmidt B]]
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[[Category: Scholz, C.]]
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[[Category: Scholz C]]
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[[Category: Stein, M.]]
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[[Category: Stein M]]
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[[Category: Voss, C.]]
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[[Category: Voss C]]
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[[Category: Zall, A.]]
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[[Category: Zall A]]
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[[Category: Binding analysis]]
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[[Category: Cancer]]
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[[Category: Drug development]]
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[[Category: Hydrolase-hydrolase inhibitor complex]]
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[[Category: Proteasome]]
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[[Category: Reversible covalent ligand]]
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Current revision

yCP in complex with BSc4999 (alpha-Keto Phenylamide)

PDB ID 4r02

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