We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

Sandbox Home

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
<<table id="tableColumnsMainPage" style="width:100%;border:2px solid #ddd;border-collapse: collapse;table-layout: fixed; ">
+
<table id="tableColumnsMainPage" style="width:100%; border:2px solid #ddd; border-collapse:collapse; table-layout:fixed;">
-
<tr><td colspan='3' style="background:#F5F5FC;border:1px solid #ddd;">
+
-
<div style="top:+0.2em; font-size:1.2em; padding:5px 5px 5px 10px; float:right;">'''''ISSN 2310-6301'''''</div>
+
-
<span style="border:none; margin:0; padding:0.3em; color:#000; font-style: italic; font-size: 1.4em;">
+
<!-- HEADER -->
-
<b>As life is more than 2D</b>, Proteopedia helps to bridge the gap between 3D structure & function of biomacromolecules
+
<tr>
-
</span>
+
<td colspan="3" style="background:#F5F5FC; border:1px solid #ddd;">
 +
<div style="position:relative; top:0.2em; font-size:1.2em; padding:5px 5px 5px 10px; float:right;">
 +
<b><i>ISSN 2310-6301</i></b>
 +
</div>
-
<span style="border:none; margin:0; padding:0.3em; color:#000; font-style: italic; font-size: 1.1em;max-width:80%;display:block;">
+
<span style="display:block; margin:0; padding:0.3em; color:#000; font-style:italic; font-size:1.4em;">
-
<b>Proteopedia</b> presents this information in a user-friendly way as a '''collaborative & free 3D-encyclopedia of proteins & other biomolecules.'''
+
<b>As life is more than 2D</b>, Proteopedia helps to bridge the gap between 3D structure &amp; function of biomacromolecules
-
</span>
+
</span>
 +
<span style="display:block; margin:0; padding:0.3em; color:#000; font-style:italic; font-size:1.1em; max-width:80%;">
 +
<b>Proteopedia</b> presents this information in a user-friendly way as a <b>collaborative &amp; free 3D-encyclopedia of proteins &amp; other biomolecules.</b>
 +
</span>
-
</td></tr>
+
<div style="clear:both;"></div>
 +
</td>
 +
</tr>
-
<tr>
+
<!-- COLUMN HEADERS -->
-
<th style="padding: 10px;background-color: #33ff7b">Selected Research Pages</th>
+
<tr>
-
<th style="padding: 10px;background-color: #f1b840">In Journals</th>
+
<th style="padding:10px; background-color:#33ff7b;">Selected Research Pages</th>
-
<th style="padding: 10px;background-color: #79baff">Education</th>
+
<th style="padding:10px; background-color:#f1b840;">In Journals</th>
-
</tr>
+
<th style="padding:10px; background-color:#79baff;">Education</th>
 +
</tr>
-
<tr valign='top'>
+
<!-- SINGLE CONTENT ROW WITH LINKS AT TOP -->
-
<td style="padding: 5px;"> {{Proteopedia:Featured SEL/{{#expr: {{#time:U}} mod {{Proteopedia:Number of SEL articles}}}}}}</td>
+
<tr style="vertical-align:top; text-align:center;">
-
<td style="padding: 5px;"> {{Proteopedia:Featured JRN/{{#expr: {{#time:U}} mod {{Proteopedia:Number of JRN articles}}}}}}</td>
+
<!-- LEFT COLUMN -->
-
<td style="padding: 5px;"> {{Proteopedia:Featured EDU/{{#expr: {{#time:U}} mod {{Proteopedia:Number of EDU articles}}}}}}</td>
+
<td style="padding:10px; vertical-align:top;">
-
</tr>
+
<!-- Links -->
 +
<div>
 +
<p>[[Help:Contents#For_authors:_contributing_content|How to add content to Proteopedia]]</p>
 +
<p>[[Proteopedia:Video_Guide|Video Guides]]</p>
 +
<p>[[Who knows]] ...</p>
 +
</div>
 +
<!-- Featured -->
 +
<div style="margin-top:10px;">
 +
{{Proteopedia:Featured SEL/{{#expr: {{#time:U}} mod {{Proteopedia:Number of SEL articles}}}}}}
 +
</div>
 +
</td>
-
<tr style="font-size: 1.2em; text-align: center;">
+
<!-- MIDDLE COLUMN -->
-
<td style="padding: 10px;background-color: #33ff7b"></td>
+
<td style="padding:10px; vertical-align:top;">
-
<td style="padding: 10px;background-color: #f1b840"></td>
+
<div>
-
<td style="padding: 10px;background-color: #79baff"></td>
+
<p>[[I3DC|About Interactive 3D Complements - '''I3DCs''']]</p>
-
</tr>
+
<p>[[Proteopedia:I3DC|List of I3DCs]]</p>
 +
<p>[[How to get an I3DC for your paper]]</p>
 +
</div>
 +
<div style="margin-top:10px;">
 +
{{Proteopedia:Featured JRN/{{#expr: {{#time:U}} mod {{Proteopedia:Number of JRN articles}}}}}}
 +
</div>
 +
</td>
 +
<!-- RIGHT COLUMN -->
 +
<td style="padding:10px; vertical-align:top;">
 +
<div>
 +
<p>[[Teaching strategies using Proteopedia]]</p>
 +
<p>[[Teaching_Scenes%2C_Tutorials%2C_and_Educators%27_Pages|Examples of pages for teaching]]</p>
 +
<p>[[Help:Contents#For_authors:_contributing_content|How to add content to Proteopedia]]</p>
 +
</div>
 +
<div style="margin-top:10px;">
 +
{{Proteopedia:Featured EDU/{{#expr: {{#time:U}} mod {{Proteopedia:Number of EDU articles}}}}}}
 +
</div>
 +
</td>
 +
</tr>
-
<tr style="font-size: 1.0em; text-align: center;">
+
<!-- BOTTOM NAV BAR -->
-
 
+
<tr>
-
<td style="padding: 10px;>
+
<td colspan="3">
-
<p>[[Help:Contents#For_authors:_contributing_content|How to add content to Proteopedia]]</p>
+
<table width="100%" style="padding:10px; background-color:#d7d8f9; font-size:1.5em;">
-
<p>[[Proteopedia:Video_Guide|Video Guides]]</p>
+
<tr>
-
<p>[[Who knows]] ...</p>
+
<td>[[Proteopedia:About|About]]</td>
-
</td>
+
<td>[[Special:Contact|Contact]]</td>
-
 
+
<td>[[Template:MainPageNews|Hot News]]</td>
-
<td style="padding: 10px;>
+
<td>[[Proteopedia:Table of Contents|Table of Contents]]</td>
-
<p>[[I3DC|About Interactive 3D Complements - '''I3DCs''']]</p>
+
<td>[[Proteopedia:Structure Index|Structure Index]]</td>
-
<p>[[Proteopedia:I3DC|List of I3DCs]]</p>
+
<td>[[Help:Contents|Help]]</td>
-
<p>[[How to get an I3DC for your paper]]</p>
+
</tr>
-
 
+
</table>
-
</td>
+
</td>
-
 
+
</tr>
-
<td style="padding: 10px;>
+
-
<p>[[Teaching strategies using Proteopedia]]</p>
+
-
<p>[[Teaching_Scenes%2C_Tutorials%2C_and_Educators%27_Pages|Examples of pages for teaching]]</p>
+
-
<p>[[Help:Contents#For_authors:_contributing_content|How to add content to Proteopedia]]</p>
+
-
</td>
+
-
 
+
-
</tr>
+
-
 
+
-
<tr><td colspan='3' >
+
-
<table width='100%' style="padding: 10px; background-color: #d7d8f9; font-size: 1.5em;"><tr>
+
-
<td>[[Proteopedia:About|About]]</td>
+
-
<td>[[Special:Contact|Contact]]</td>
+
-
<td>[[Template:MainPageNews|Hot News]]</td>
+
-
<td>[[Proteopedia:Table of Contents|Table of Contents]]</td>
+
-
<td>[[Proteopedia:Structure Index|Structure Index]]</td>
+
-
<td>[[Help:Contents|Help]]</td>
+
-
</tr></table>
+
-
</td></tr>
+
</table>
</table>

Revision as of 16:06, 30 September 2025

       ISSN 2310-6301

     
       As life is more than 2D, Proteopedia helps to bridge the gap between 3D structure & function of biomacromolecules
     

     
       Proteopedia presents this information in a user-friendly way as a collaborative & free 3D-encyclopedia of proteins & other biomolecules.
Selected Research Pages In Journals Education
About this image
Self-assembling Nano-Cages

Huddy, Hsia, Kibler, Xu & 27 others in the Nobel Prize winning group of David Baker have designed standardized protein building blocks that self assemble into a wide range of nanostructures. The building blocks attach to each other at engineered sites and angles, and come in various sizes.

>>> Get a quick overview! >>>

About this image
Geobacter pili: surprising function.

Y Gu, V Srikanth, AI Salazar-Morales, R Jain, JP O'Brien, SM Yi, RK Soni, FA Samatey, SE Yalcin, NS Malvankar. Nature 2021 doi: 10.1038/s41586-021-03857-w
Geobacter pili were long thought to be electrically conductive protein nanowires composed of PilA-N. Nanowires are crucial to the energy metabolism of bacteria flourishing in oxygen-deprived environments. To everyone's surprise, in 2019, the long-studied nanowires were found to be linear polymers of multi-heme cytochromes, not pili. The first cryo-EM structure of pili (2021) reveals a filament made of dimers of PilA-N and PilA-C, shown. Electrical conductivity of pili is much lower than that of cytochrome nanowires. Evidence suggests that PilA-NC filaments are periplasmic pseudopili crucial for exporting cytochrome nanowires onto the cell surface, rather than the pili serving as nanowires themselves.

>>> Visit I3DC Interactive Visualizations >>>

About this image
Eastern Equine Encephalitis virus
Although only a few people in the USA get Eastern Equine Encephalitis every year, the fatality rate is 30%, and many survivors have ongoing neurological problems. The virus is transmitted by mosquitoes from animals, especially birds, to humans. This RNA virus has a complicated capsid (a slab of which is shown) composed of protein shells with an enclosed lipid bilayer. The structures of virus capsids can be explored using free FirstGlance in Jmol.

>>> Visit I3DC Interactive Visualizations >>>

About Contact Hot News Table of Contents Structure Index Help
Retrieved from "http://52.214.119.220/wiki/index.php/Sandbox_Home"
Personal tools