User:Tilman Schirmer/Sandbox 125
From Proteopedia
< User:Tilman Schirmer(Difference between revisions)
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | === | + | ===β-hairpin=== |
<applet load='1tta.pdb' size='300' frame='true' align='right' scene='User:Tilman_Schirmer/Sandbox_125/Hairpin_pre-albumin/4' caption='1tta'/> | <applet load='1tta.pdb' size='300' frame='true' align='right' scene='User:Tilman_Schirmer/Sandbox_125/Hairpin_pre-albumin/4' caption='1tta'/> | ||
| - | <br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br> | + | Common motif of arrangement of two antiparallel β-strands connected by a regular turn. |
| + | |||
| + | <scene name='User:Tilman_Schirmer/Sandbox_125/Hairpin_pre-albumin/4'>β-hairpin</scene> | ||
| + | |||
| + | <scene name='User:Tilman_Schirmer/Sandbox_125/Hairpin_pre-albumin_fullmodel/1'>Hairpin fullmodel </scene> | ||
| + | |||
| + | <scene name='User:Tilman_Schirmer/Sandbox_125/Hairpin_pre-albumin_fullmodel/2'>Hairpin fullmodel </scene> (atom colors) | ||
| + | |||
| + | |||
| + | <br><br> | ||
| + | ''use better example! Note: some side-chains have multiple conformations.''<br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br> | ||
---- | ---- | ||
===Greek key topology=== | ===Greek key topology=== | ||
| Line 7: | Line 17: | ||
<applet load='1tta.pdb' size='400' frame='true' align='right' scene='User:Tilman_Schirmer/Sandbox_125/Pre-albumin_overall/1' caption='1tta'/> | <applet load='1tta.pdb' size='400' frame='true' align='right' scene='User:Tilman_Schirmer/Sandbox_125/Pre-albumin_overall/1' caption='1tta'/> | ||
| - | The prealbumin <scene name='User:Tilman_Schirmer/Sandbox_125/Pre-albumin_overall/1'>monomer</scene> is a β-sandwich composed of an antiparallel and a mixed β-sheet. It forms a <scene name='User:Tilman_Schirmer/Sandbox_125/Greek_key_pre-albumin/6'>dimer</scene> with | + | The prealbumin <scene name='User:Tilman_Schirmer/Sandbox_125/Pre-albumin_overall/1'>monomer</scene> is a β-sandwich composed of an antiparallel and a mixed β-sheet. It forms a <scene name='User:Tilman_Schirmer/Sandbox_125/Greek_key_pre-albumin/6'>dimer</scene> with the mixed β- sheets associated to a large transmolecular sheet. |
<br> | <br> | ||
Topology diagram of the monomer: | Topology diagram of the monomer: | ||
Current revision
β-hairpin
|
Common motif of arrangement of two antiparallel β-strands connected by a regular turn.
(atom colors)
use better example! Note: some side-chains have multiple conformations.
Greek key topology
|
The prealbumin is a β-sandwich composed of an antiparallel and a mixed β-sheet. It forms a with the mixed β- sheets associated to a large transmolecular sheet.
Topology diagram of the monomer:
A consists of 4 antiparallel β-strands in the order bcda, i.e. the the 1st and 4th strand are adjacent and the 2nd and 3rd strand form a β-hairpin.
