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3iyy

From Proteopedia

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{{Seed}}
 
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[[Image:3iyy.jpg|left|200px]]
 
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==Coordinates of the b1b bridge-forming protein structures fitted into the Cryo-EM map of EFG.GDPNP-bound E.coli 70S ribosome(EMD-1363)==
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The line below this paragraph, containing "STRUCTURE_3iyy", creates the "Structure Box" on the page.
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<SX load='3iyy' size='340' side='right' viewer='molstar' caption='[[3iyy]], [[Resolution|resolution]] 10.90&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3iyy]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_O55:H7_str._CB9615 Escherichia coli O55:H7 str. CB9615]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IYY FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 10.9&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iyy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iyy OCA], [https://pdbe.org/3iyy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iyy RCSB], [https://www.ebi.ac.uk/pdbsum/3iyy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iyy ProSAT]</span></td></tr>
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{{STRUCTURE_3iyy| PDB=3iyy | SCENE= }}
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iy/3iyy_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iyy ConSurf].
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<div style="clear:both"></div>
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===Coordinates of the b1b bridge-forming protein structures fitted into the Cryo-EM map of EFG.GDPNP-bound E.coli 70S ribosome(EMD-1363)===
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==See Also==
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*[[Ribosomal protein L31|Ribosomal protein L31]]
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*[[Ribosomal protein L5|Ribosomal protein L5]]
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<!--
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*[[Ribosomal protein S13|Ribosomal protein S13]]
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The line below this paragraph, {{ABSTRACT_PUBMED_20643101}}, adds the Publication Abstract to the page
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__TOC__
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(as it appears on PubMed at http://www.pubmed.gov), where 20643101 is the PubMed ID number.
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</SX>
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[[Category: Escherichia coli O55:H7 str. CB9615]]
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{{ABSTRACT_PUBMED_20643101}}
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[[Category: Large Structures]]
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[[Category: Chakraborty B]]
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==About this Structure==
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[[Category: Sengupta J]]
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3IYY is a 3 chains structure with sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYY OCA].
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[[Category: Shasmal M]]
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==Reference==
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<ref group="xtra">PMID:20643101</ref><references group="xtra"/>
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[[Category: Escherichia coli]]
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[[Category: Chakraborty, B.]]
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[[Category: Sengupta, J.]]
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[[Category: Shasmal, M.]]
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[[Category: B1b bridge]]
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[[Category: Ratchet-like motion]]
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[[Category: Ribosomal intersubunit bridge]]
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[[Category: Ribosomal protein]]
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[[Category: Ribosomal protein l31]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 1 09:47:49 2010''
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Current revision

Coordinates of the b1b bridge-forming protein structures fitted into the Cryo-EM map of EFG.GDPNP-bound E.coli 70S ribosome(EMD-1363)

3iyy, resolution 10.90Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

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