We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

2kqz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:47, 1 May 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2kqz.png|left|200px]]
 
-
{{STRUCTURE_2kqz| PDB=2kqz | SCENE= }}
+
==Solution structure of the Rpn13 DEUBAD domain==
-
 
+
<StructureSection load='2kqz' size='340' side='right'caption='[[2kqz]]' scene=''>
-
===Fragment of proteasome protein===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2kqz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KQZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KQZ FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_20471946}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kqz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kqz OCA], [https://pdbe.org/2kqz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kqz RCSB], [https://www.ebi.ac.uk/pdbsum/2kqz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kqz ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[2kqz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KQZ OCA].
+
== Function ==
 +
[https://www.uniprot.org/uniprot/ADRM1_HUMAN ADRM1_HUMAN] Functions as a proteasomal ubiquitin receptor. Recruits the deubiquitinating enzyme UCHL5 at the 26S proteasome and promotes its activity.<ref>PMID:16990800</ref> <ref>PMID:17139257</ref> <ref>PMID:16815440</ref> <ref>PMID:16906146</ref> <ref>PMID:18497817</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kq/2kqz_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kqz ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Proteasome|Proteasome]]
+
*[[Proteasome 3D structures|Proteasome 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:020471946</ref><references group="xtra"/>
+
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Chen, X.]]
+
[[Category: Large Structures]]
-
[[Category: Finley, D.]]
+
[[Category: Chen X]]
-
[[Category: Lee, B.]]
+
[[Category: Finley D]]
-
[[Category: Walters, K J.]]
+
[[Category: Lee B]]
-
[[Category: Proteasome]]
+
[[Category: Walters KJ]]
-
[[Category: Protein binding]]
+
-
[[Category: Uch37-binding domain]]
+

Current revision

Solution structure of the Rpn13 DEUBAD domain

PDB ID 2kqz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2kqz"
Personal tools