1nn8
From Proteopedia
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- | [[Image:1nn8.png|left|200px]] | ||
- | + | ==CryoEM structure of poliovirus receptor bound to poliovirus== | |
+ | <SX load='1nn8' size='340' side='right' viewer='molstar' caption='[[1nn8]], [[Resolution|resolution]] 15.00Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[1nn8]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Human_poliovirus_1_Mahoney Human poliovirus 1 Mahoney]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NN8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NN8 FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 15Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nn8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nn8 OCA], [https://pdbe.org/1nn8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nn8 RCSB], [https://www.ebi.ac.uk/pdbsum/1nn8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nn8 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/PVR_HUMAN PVR_HUMAN] Mediates NK cell adhesion and triggers NK cell effector functions. Binds two different NK cell receptors: CD96 and CD226. These interactions accumulates at the cell-cell contact site, leading to the formation of a mature immunological synapse between NK cell and target cell. This may trigger adhesion and secretion of lytic granules and IFN-gamma and activate cytoxicity of activated NK cells. May also promote NK cell-target cell modular exchange, and PVR transfer to the NK cell. This transfer is more important in some tumor cells expressing a lot of PVR, and may trigger fratricide NK cell activation, providing tumors with a mechanism of immunoevasion. Plays a role in mediating tumor cell invasion and migration. Serves as a receptor for poliovirus attachment to target cells. May play a role in axonal transport of poliovirus, by targeting virion-PVR-containing endocytic vesicles to the microtubular network through interaction with DYNLT1. This interaction would drive the virus-containing vesicle to the axonal retrograde transport.<ref>PMID:15471548</ref> <ref>PMID:15607800</ref> | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nn/1nn8_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nn8 ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
- | == | + | ==See Also== |
- | + | *[[Art:Polio: A resolution to eradicate|Art:Polio: A resolution to eradicate]] | |
- | + | *[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]] | |
- | + | == References == | |
- | + | <references/> | |
- | [[ | + | __TOC__ |
- | + | </SX> | |
- | == | + | |
- | < | + | |
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
- | [[Category: Human poliovirus 1 | + | [[Category: Human poliovirus 1 Mahoney]] |
- | [[Category: Bator | + | [[Category: Large Structures]] |
- | [[Category: Bowman | + | [[Category: Bator CM]] |
- | [[Category: Chipman | + | [[Category: Bowman VD]] |
- | [[Category: He | + | [[Category: Chipman PR]] |
- | [[Category: Kuhn | + | [[Category: He Y]] |
- | [[Category: Mueller | + | [[Category: Kuhn RJ]] |
- | [[Category: Mukhopadhyay | + | [[Category: Mueller S]] |
- | [[Category: Peng | + | [[Category: Mukhopadhyay S]] |
- | [[Category: Rossmann | + | [[Category: Peng X]] |
- | [[Category: Wimmer | + | [[Category: Rossmann MG]] |
- | + | [[Category: Wimmer E]] | |
- | + | ||
- | + |
Current revision
CryoEM structure of poliovirus receptor bound to poliovirus
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Categories: Homo sapiens | Human poliovirus 1 Mahoney | Large Structures | Bator CM | Bowman VD | Chipman PR | He Y | Kuhn RJ | Mueller S | Mukhopadhyay S | Peng X | Rossmann MG | Wimmer E