5bou
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 5bou is ON HOLD Authors: Beck, P., Groll, M. Description: Yeast 20S proteasome in complex with a beta1 / beta2 specific non-peptidic sulfonamide Li...) |
|||
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Yeast 20S proteasome in complex with a beta1 / beta2 specific non-peptidic sulfonamide Ligand== | |
| + | <StructureSection load='5bou' size='340' side='right'caption='[[5bou]], [[Resolution|resolution]] 2.60Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[5bou]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BOU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5BOU FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4UC:N-[4-(ACETYLSULFAMOYL)PHENYL]-2-(4-ETHOXYPHENYL)QUINOLINE-4-CARBOXAMIDE'>4UC</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5bou FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5bou OCA], [https://pdbe.org/5bou PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5bou RCSB], [https://www.ebi.ac.uk/pdbsum/5bou PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5bou ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PSA7_YEAST PSA7_YEAST] The proteasome degrades poly-ubiquitinated proteins in the cytoplasm and in the nucleus. It is essential for the regulated turnover of proteins and for the removal of misfolded proteins. The proteasome is a multicatalytic proteinase complex that is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. It has an ATP-dependent proteolytic activity. | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The proteasome represents a validated drug target for the treatment of cancer, however, new types of inhibitors are required to tackle the development of resistant tumors. Current fluorescence-based screening methods suffer from low sensitivity and are limited to the detection of ligands with conventional binding profiles. In response to these drawbacks, a crystallographic screening procedure for the discovery of agents with a novel mode of action was utilized. The optimized workflow was applied to the screening of a focused set of compounds, resulting in the discovery of a beta1/beta2-specific sulfonamide derivative that noncovalently binds between subunits beta1 and beta2. The binding pocket displays significant differences in size and polarity between the immuno- and constitutive proteasome. The identified ligand thus provides valuable insights for the future structure-based design of subtype-specific proteasome inhibitors. | ||
| - | + | Identification of a beta1/beta2-Specific Sulfonamide Proteasome Ligand by Crystallographic Screening.,Beck P, Reboud-Ravaux M, Groll M Angew Chem Int Ed Engl. 2015 Aug 4. doi: 10.1002/anie.201505054. PMID:26242779<ref>PMID:26242779</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: Beck | + | <div class="pdbe-citations 5bou" style="background-color:#fffaf0;"></div> |
| - | [[Category: Groll | + | |
| + | ==See Also== | ||
| + | *[[Proteasome 3D structures|Proteasome 3D structures]] | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Saccharomyces cerevisiae S288C]] | ||
| + | [[Category: Beck P]] | ||
| + | [[Category: Groll M]] | ||
Current revision
Yeast 20S proteasome in complex with a beta1 / beta2 specific non-peptidic sulfonamide Ligand
| |||||||||||
