This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4ygo
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==Dodecameric structure of spermidine N-acetyltransferase from Vibrio cholerae in intermediate state== | ==Dodecameric structure of spermidine N-acetyltransferase from Vibrio cholerae in intermediate state== | ||
| - | <StructureSection load='4ygo' size='340' side='right' caption='[[4ygo]], [[Resolution|resolution]] 2.50Å' scene=''> | + | <StructureSection load='4ygo' size='340' side='right'caption='[[4ygo]], [[Resolution|resolution]] 2.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4ygo]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4ygo]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YGO FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MOH:METHANOL'>MOH</scene></td></tr> |
| - | < | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ygo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ygo OCA], [https://pdbe.org/4ygo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ygo RCSB], [https://www.ebi.ac.uk/pdbsum/4ygo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ygo ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/ATDA_VIBCH ATDA_VIBCH] Involved in the protection against polyamine toxicity by regulating their concentration. Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to the primary amino groups of spermidine to yield N(1)- and N(8)-acetylspermidine. It can use polyamines such as spermine and N(1)-acetylspermine, but not putrescine or cadaverine.<ref>PMID:23184347</ref> <ref>PMID:25623305</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 18: | Line 19: | ||
</div> | </div> | ||
<div class="pdbe-citations 4ygo" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 4ygo" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Spermidine/spermine N-acetyltransferase|Spermidine/spermine N-acetyltransferase]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Vibrio cholerae O1 biovar El Tor str. N16961]] |
| - | [[Category: | + | [[Category: Anderson WF]] |
| - | [[Category: Filippova | + | [[Category: Filippova EV]] |
| - | [[Category: Kiryukhina | + | [[Category: Kiryukhina O]] |
| - | [[Category: Minasov | + | [[Category: Minasov G]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Dodecameric structure of spermidine N-acetyltransferase from Vibrio cholerae in intermediate state
| |||||||||||
