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- | + | == '''Coagulation Factor VIII (3cdz)''' == | |
- | == | + | <StructureSection load='3cdz' size='340' side='right' caption='The human coagulation factor VIII' scene=''> |
- | <StructureSection load=' | + | '''The human Factor VIII''', also known as anti-hemophilic factor (AHF), is an essential blood-clotting protein <ref name="wikipedia">https://en.wikipedia.org/wiki/Factor_VIII [11.01.2019]</ref>. It consists of 2332 residues <ref name="Ngo">PMID: 18400180</ref>. Its gene is located on the X chromosome <ref name="wikipedia" /><ref name="Antonarakis">PMID: 8578479</ref>. |
- | + | ||
- | + | Factor VIII is produced inside the liver (by the sinusoidal cells) and outside (by the endothelial cells) and acts in the intrinsic pathway of blood coagulation <ref name="wikipedia" />. It is actually the lack or the deficiency of the factor VIII (which is a plasma glycoprotein) that causes a bleeding disorder: hemophilia A <ref name="Ngo" />. | |
+ | |||
+ | Factor VIII is much studied in order to find a cure for hemophilia A (also written as HEMA), for instance by designing mimicking factors <ref>Ragni MV. Mimicking Factor VIII to Manage the Factor VIII–Deficient State. The New England journal of medicine. 2018 Aug; 379(9): 880-882. doi: 10.1056/NEJMe1808789</ref>. | ||
+ | |||
+ | |||
+ | == History == | ||
+ | '''1937''': first use of the factor VIII (known as “Antihemophilic Globulin”) to cure blood coagulation disorders thanks to the discovery of F.H.L Patek and A.J Taylor <ref>Patek AJ & Taylor FHL. Hemophilia. II. Some properties of a substance obtained from normal human plasma effective in accelerating the coagulation of hemophilic blood. The Journal of clinical investigation. 1937 Jan; 16(1): 113-124. PMID: 16694450 doi: 10.1172/JCI100829</ref>. | ||
+ | |||
+ | '''1964''': Usual utilisation of concentrated factor VIII to treat hemophilia <ref>Dallman PR & Pool JG. Treatment of hemophilia with factor VIII concentrates. New England Journal of Medicine. 1968 Jan ; 278(4): 199-202. PMID: 5711341 doi: 10.1056/NEJM196801252780406</ref>. | ||
+ | |||
+ | '''1984''': Factor VIII was first characterized by scientists at Genentech <ref name="El">El Khorassani M & Benkirane AN. Le facteur VIII coagulant. Médecine du Maghreb. 1996; 55: 11-13.</ref>. | ||
+ | |||
+ | '''2017''': Concentrated factor VIII with extended half-life <ref>Ljung RC. Prevention and management of bleeding episodes in children with hemophilia. Pediatric Drugs. 2018 Aug; 1-10. doi https://doi.org/10.1007/s40272-018-0307-z</ref>. | ||
+ | |||
== Function == | == Function == | ||
+ | ====Factor VIII plays a central role in blood coagulation==== | ||
+ | |||
+ | The Factor VIII circulates in the bloodstream in its inactive form, bound to another molecule called [[Von Willebrand Factor]], until an injury that damages blood vessels occurs. In plasma, factor VIII exists predominantly in a complex with the Von Willebrand factor, because this latter plays a role of stabilization. By contrast, in its free state, factor VIII is rapidly cleaved by [[Serine Proteases]] <ref name="wikipedia" /><ref name="El" />. | ||
+ | |||
+ | ====The coagulation process==== | ||
+ | |||
+ | In response to an injury, the coagulation factor VIII is separated from von Willebrand factor. The active form (called “Factor VIIIa”) is obtained by a proteolytic cleavage of the B-domain of Factor VIII by [[Thrombin]] <ref name="wikipedia" /><ref name="Ngo" />. Then the two remaining chains are linked together thanks to a metal link (probably calcium ion) <ref name="Ngo" />. | ||
+ | Thus the factor VIIIa is a non-covalent dimer <ref name="Ngo" />. | ||
+ | |||
+ | It is the catalyst for the activation reaction of the factor X (to [[Factor Xa]]) by activated [[Factor IX]]a in the presence of calcium ion and phospholipids. | ||
+ | This activation reaction is accelerated approximately 200,000 times when factor VIII is present. <ref name="wikipedia" /><ref name="Ngo" /><ref name="El" /> | ||
+ | |||
+ | Then, no longer protected by the von Willebrand factor, the factor VIIIa is proteolytically inactivated and quickly cleared from the blood stream, whereas, factor Xa becomes able (with the help of other factors) to stop the bleeding by forming a blood clot. <ref name="wikipedia" /><ref name="El" /> | ||
+ | |||
+ | |||
+ | == Structure == | ||
+ | ====Primary Structure==== | ||
+ | In humans, factor VIII is encoded by the F8 gene <ref name="Ngo" /><ref name="uni">https://www.uniprot.org/uniprot/P00451 [11.01.2019]</ref><ref name="pdb">http://www.rcsb.org/structure/3CDZ [11.01.2019]</ref>. This gene maps on the most distant band of the long arm of the X-chromosome (region Xq28). It is 186 kb in size (0.1 % of the whole size of the chromosome) and contains 26 exons <ref name="Antonarakis" />. | ||
+ | |||
+ | ====Secondary Structure==== | ||
+ | Factor VIII protein is composed of six globular domains: A<sub>1</sub>-A<sub>2</sub>-B-A<sub>3</sub>-C<sub>1</sub>-C<sub>2</sub> and contains one Ca<sup>2+</sup> and two Cu<sup>2+</sup> ions. It has a molecular weight of 330 kDa <ref name="Ngo" /><ref name="El" /><ref name="uni" />. | ||
+ | |||
+ | In the following, the structure of an engineered protein is further described. This protein has no B domain to mimic the active factor VIIIa. In addition, it is more amenable to structural studies because it shows higher stability expression levels and structural homogenity <ref name="Ngo" /><ref name="toole">Toole JJ, Pittman DD, Orr EC, Murtha P, Wasley LC & Kaufman RJ. A large region (approximately equal to 95 kDa) of human factor VIII is dispensable for ''in vitro'' procoagulant activity. Proceedings of the National Academy of Sciences. 1986 Aug; 83(16): 5939-5942. PMID: 3016730 doi https://doi.org/10.1073/pnas.83.16.5939</ref>. | ||
+ | |||
+ | The three A domains are homologous to the A domains of the copper-binding protein [[Ceruloplasmin]] <ref name="wikipedia" /><ref name="El" />. Together, they form a triangular heterotrimer where the A<sub>1</sub> and A<sub>3</sub> domains interact with the C<sub>2</sub> and C<sub>1</sub> domains, respectively <ref name="Ngo" />. | ||
+ | |||
+ | The C domains belong to the phospholipid-binding discoidin domain family <ref name="wikipedia" />. They are adjacent at the base of the triangular heterotrimer. Moreover, C<sub>1</sub> and C<sub>2</sub> domains are structurally homologous and they have the ability to bind the membrane. Indeed, both C domain protrude three β-hairpin loops with hydrophobic and basic residues in the same direction. Thanks to these loops the factor VIII might interact with the phospholipid bilayer. <ref name="Ngo" /> | ||
+ | |||
+ | Factor VIIIa is obtained by cleavage and release of the B domain <ref name="wikipedia" /><ref name="Ngo" /><ref name="toole" />. Although factor VIIIa can be formed from at least two cleavages involving Arg372 and Arg1689, fully active factor VIIIa is obtained only after a third cleavage at Arg740 <ref name="Ngo" />. | ||
+ | |||
+ | |||
+ | The two chain that result are a heavy and a light chains <ref name="Ngo" /><ref name="El" /><ref name="pdb" />. | ||
+ | |||
+ | • The <scene name='80/802656/Heavy_chain/4'>heavy chain</scene> has a various size (90 or 120 kDa) <ref name="wikipedia" /><ref name="Binhoreau">Bihoreau N, Fontaine-Aupart MP, Lehegarat A, Desmadril M, Yon JM. First determination of the secondary structure of purified factor VIII light chain. Biochem J. 1992 Nov; 288 ( Pt 1): 35-40. PMID:1445279 doi: 10.1042/bj2880035</ref>. It consists of the A<sub>1</sub> and A<sub>2</sub> domains <ref name="wikipedia" /><ref name="El" /><ref name="Binhoreau" />. Both domains are built up of two connected β barrels <ref name="Ngo" />. | ||
+ | |||
+ | • The <scene name='80/802656/Light_chain/2'>light chain</scene> has a molecular weight of 80 kDa and is composed of 684 amino acids <ref name="Binhoreau" />. It contains two domains: a unique A domain of 371 amino acids and a duplicated C domain of 153 amino acids and 160 amino acids, respectively <ref name="Binhoreau" />. These domains are ranked in the following order A<sub>3</sub>-C<sub>1</sub>-C<sub>2</sub> <ref name="wikipedia" /><ref name="Binhoreau" />. It is composed of 42 % irregular structure, 36 % β-strands, and 22 % α-helices <ref name="Binhoreau" />. The C<sub>1</sub> and C<sub>2</sub> domains are defined by a distorted β barrel, while A<sub>3</sub>, as well as A<sub>1</sub> and A<sub>2</sub>, is composed of two connected β barrels <ref name="Ngo" />. This chain also contains of the major binding site of von Willebrand Factor at its N-terminus <ref name="Binhoreau" />. | ||
+ | |||
+ | |||
+ | Figure 1: Domain organisation of the uncleaved coagulation factor VIII (top) and the engineered factor without B domain (bottom). (Figure adapted from <ref name="Ngo" />) | ||
+ | |||
+ | [[Image:Domain organisation factorVIII (un)cleaved.png]] | ||
+ | |||
+ | Both chains are non-covalently associated through to a calcium ion to form the active heterodimer <ref name="Ngo" /><ref name="Binhoreau" />. This complex is the pro-coagulant factor VIIIa <ref name="wikipedia" />. | ||
+ | Such an association is essential for the functioning of the factor VIII <ref name="Binhoreau" />. | ||
+ | |||
+ | ====Ligands==== | ||
+ | The calcium ion (Ca<sup>2+</sup>) and the copper ion (Cu<sup>2+</sup>) are both ligands the factor VIII is able to bind to <ref name="pdb" />. More precisely, in factor VIII there are two copper ions and their binding sites are located internally within the <scene name='80/802656/A3cu/1'>A3</scene> and the <scene name='80/802656/A1/1'>A1</scene> domain. The <scene name='80/802656/A1/1'>A1</scene> domain binds another ligand, a <scene name='80/802656/A1ca/1'>calcium ion</scene>, bound to its own binding site. <ref name="Ngo" /> | ||
+ | |||
+ | One other molecule can be found on this protein: N-acetyl-D-glucosamine. This molecule is covalently bound to Asn residues of the protein during the maturation process in the endoplasmic reticulum and the Golgi apparatus <ref name="Lenting">Lenting PJ, Pegon JN, Christophe OD, Denis CV. Factor VIII and von Willebrand factor – too sweet for their own good. Haemophilia. 2010 June; 16(Suppl. 5), 194–199. PMID: 20590881 doi: https://doi.org/10.1111/j.1365-2516.2010.02320.x</ref>. N-acetyl-D-glucosamine is not a ligand since it is not a specific substrate that binds a specific site in the protein. Indeed many proteins have such a glycolysation on their asparagine residues <ref name="Apweiler">Apweiler R, Hermjakob H,Sharon N.On the frequency of protein glycosylation, as deduced from analysis of the SWISS-PROT database.Biochimica et Biophysica Acta (BBA)-General Subjects.1999 Dec; 1473(1), 4-8.PMID: 10580125 doi: 10.1016/s0304-4165(99)00165-8</ref>. N-acetyl-D-glucosamine is a post-translational modifications and may be different depending on the physiological context <ref name="Helenius">Helenius A, Aebi M. Intracellular functions of N-linked glycans. Science. 2001 Mar, 291(5512), 2364-2369 doi:10.1126/science.291.5512.2364 </ref><ref>https://pubchem.ncbi.nlm.nih.gov/compound/439174 [25.06.2019]</ref>. | ||
+ | The alpha-D-mannose molecule, present in the structure shown here, might also be a posttranslational modification, since it is a sugar that can be establish N-type bonds<ref>https://en.wikipedia.org/wiki/Mannose [25.06.2019]</ref>. Factor VIII is thus a glycoprotein <ref name="Apweiler" />. | ||
+ | |||
+ | |||
== Disease == | == Disease == | ||
+ | Hemophilia is a genetic disorder characterized by a permanent tendency to hemorrhage because of a lack of blood coagulation <ref name="Ngo" />. | ||
+ | There are different types of hemophilia: A or B, caused by a deficiency of two different factors. | ||
+ | Hemophilia A (HEMA), is four times as common as hemophilia B. | ||
+ | It is caused by a deficiency of factor VIII. <ref name="Srivastava">Srivastava A, Brewer AK, Mauser‐Bunschoten EP, Key NS, Kitchen S, Llinas A, Ludlam CA, Mahlangu JN, Mulder K, Poon MC & Street A. Guidelines for the management of hemophilia. Haemophilia. 2013 Jan; 19(1): e1-e47. PMID: 22776238 doi: 10.1111/j.1365-2516.2012.02909.x</ref> | ||
+ | This deficiency in factor VIII clotting activity results in prolonged delayed or recurrent bleeding prior to complete wound healing <ref name="Konkle">Konkle BA, Huston H & Fletcher SH. Hemophilia A, Synonym: Factor VIII Deficiency. Gene Rewiews. 2017 Jun. PMID: 20301578</ref>. | ||
- | == | + | Although hemophilia A is usually an inherited disease and therefore runs in families <ref name="Srivastava" />, about one-third of people with the disease are caused by a spontaneous mutation <ref name="Srivastava" /> such as misense or nonsense mutations, gene deletions or inversions <ref name="Ngo" />. |
- | = | + | Hemophilia A can be mild, moderate, or severe, depending on the level of Factor VIII clotting activity <ref name="Konkle" /><ref>White GC, Rosendaal F, Aledort LM, Lusher JM, Rothschild C, Ingerslev J. Definitions in hemophilia, Recommendation of the scientific subcommittee on factor VIII and factor IX of the scientific and standardization committee of the International Society on Thrombosis and Haemostasis. Thromb Haemost. 2001 Mar; 85(3): 560. PMID: 11307831</ref>. |
- | + | The major treatment of the bleeding disorder associated with hemophilia A is the infusion of factor VIII, which leads to the correction of hemostasis <ref name="Srivastava" />. | |
+ | |||
+ | ====Inheritance==== | ||
+ | Hemophilia A is inherited in an X-linked recessive manner. This means that if a son inherits an X chromosome carrying hemophilia from his mother, he will have hemophilia. By contrast, daughters, even if they inherit one hemophilia allele, can compensate it with their second healthy X chromosome. As a result, women only rarely have symptoms, but women that are carriers, may pass the gene on to their children (50% chance per pregnancy) <ref name="Konkle" />. | ||
+ | |||
+ | |||
+ | Figure 2: Hemophilia Inheritance | ||
+ | |||
+ | [[Image:Hemophilia_inheritance.JPG|Hemophilia Inheritance]] | ||
+ | |||
+ | |||
+ | == Relevance == | ||
+ | Hemophilia occurs in approximately 1 in 5,000 live births but it is severe in approximately 60% of cases. | ||
+ | The main medication to treat hemophilia A is concentrated factor VIII protein, called “clotting factor”. Getting this “clotting factor” is therefore a major concern for hemophilia-affected people <ref name="Srivastava" />. | ||
+ | |||
+ | Nowadays, recombinant coagulation factor VIII products are developed in labs through the use of DNA technology <ref name="El" /><ref name="toole" />. For instance, Toole and colleagues have created a biologically fully active factor with improved heterologous expression efficiency by deleting the B-domain from the native human factor VIII <ref name="toole" />. | ||
</StructureSection> | </StructureSection> | ||
== References == | == References == | ||
+ | |||
+ | |||
<references/> | <references/> |
Current revision
Coagulation Factor VIII (3cdz)
|
References
- ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 https://en.wikipedia.org/wiki/Factor_VIII [11.01.2019]
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 2.19 2.20 Ngo JC, Huang M, Roth DA, Furie BC, Furie B. Crystal structure of human factor VIII: implications for the formation of the factor IXa-factor VIIIa complex. Structure. 2008 Apr;16(4):597-606. PMID:18400180 doi:10.1016/j.str.2008.03.001
- ↑ 3.0 3.1 Antonarakis SE. Molecular genetics of coagulation factor VIII gene and hemophilia A. Thromb Haemost. 1995 Jul;74(1):322-8. PMID:8578479
- ↑ Ragni MV. Mimicking Factor VIII to Manage the Factor VIII–Deficient State. The New England journal of medicine. 2018 Aug; 379(9): 880-882. doi: 10.1056/NEJMe1808789
- ↑ Patek AJ & Taylor FHL. Hemophilia. II. Some properties of a substance obtained from normal human plasma effective in accelerating the coagulation of hemophilic blood. The Journal of clinical investigation. 1937 Jan; 16(1): 113-124. PMID: 16694450 doi: 10.1172/JCI100829
- ↑ Dallman PR & Pool JG. Treatment of hemophilia with factor VIII concentrates. New England Journal of Medicine. 1968 Jan ; 278(4): 199-202. PMID: 5711341 doi: 10.1056/NEJM196801252780406
- ↑ 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 7.8 El Khorassani M & Benkirane AN. Le facteur VIII coagulant. Médecine du Maghreb. 1996; 55: 11-13.
- ↑ Ljung RC. Prevention and management of bleeding episodes in children with hemophilia. Pediatric Drugs. 2018 Aug; 1-10. doi https://doi.org/10.1007/s40272-018-0307-z
- ↑ 9.0 9.1 https://www.uniprot.org/uniprot/P00451 [11.01.2019]
- ↑ 10.0 10.1 10.2 http://www.rcsb.org/structure/3CDZ [11.01.2019]
- ↑ 11.0 11.1 11.2 11.3 Toole JJ, Pittman DD, Orr EC, Murtha P, Wasley LC & Kaufman RJ. A large region (approximately equal to 95 kDa) of human factor VIII is dispensable for in vitro procoagulant activity. Proceedings of the National Academy of Sciences. 1986 Aug; 83(16): 5939-5942. PMID: 3016730 doi https://doi.org/10.1073/pnas.83.16.5939
- ↑ 12.0 12.1 12.2 12.3 12.4 12.5 12.6 12.7 12.8 Bihoreau N, Fontaine-Aupart MP, Lehegarat A, Desmadril M, Yon JM. First determination of the secondary structure of purified factor VIII light chain. Biochem J. 1992 Nov; 288 ( Pt 1): 35-40. PMID:1445279 doi: 10.1042/bj2880035
- ↑ Lenting PJ, Pegon JN, Christophe OD, Denis CV. Factor VIII and von Willebrand factor – too sweet for their own good. Haemophilia. 2010 June; 16(Suppl. 5), 194–199. PMID: 20590881 doi: https://doi.org/10.1111/j.1365-2516.2010.02320.x
- ↑ 14.0 14.1 Apweiler R, Hermjakob H,Sharon N.On the frequency of protein glycosylation, as deduced from analysis of the SWISS-PROT database.Biochimica et Biophysica Acta (BBA)-General Subjects.1999 Dec; 1473(1), 4-8.PMID: 10580125 doi: 10.1016/s0304-4165(99)00165-8
- ↑ Helenius A, Aebi M. Intracellular functions of N-linked glycans. Science. 2001 Mar, 291(5512), 2364-2369 doi:10.1126/science.291.5512.2364
- ↑ https://pubchem.ncbi.nlm.nih.gov/compound/439174 [25.06.2019]
- ↑ https://en.wikipedia.org/wiki/Mannose [25.06.2019]
- ↑ 18.0 18.1 18.2 18.3 18.4 Srivastava A, Brewer AK, Mauser‐Bunschoten EP, Key NS, Kitchen S, Llinas A, Ludlam CA, Mahlangu JN, Mulder K, Poon MC & Street A. Guidelines for the management of hemophilia. Haemophilia. 2013 Jan; 19(1): e1-e47. PMID: 22776238 doi: 10.1111/j.1365-2516.2012.02909.x
- ↑ 19.0 19.1 19.2 Konkle BA, Huston H & Fletcher SH. Hemophilia A, Synonym: Factor VIII Deficiency. Gene Rewiews. 2017 Jun. PMID: 20301578
- ↑ White GC, Rosendaal F, Aledort LM, Lusher JM, Rothschild C, Ingerslev J. Definitions in hemophilia, Recommendation of the scientific subcommittee on factor VIII and factor IX of the scientific and standardization committee of the International Society on Thrombosis and Haemostasis. Thromb Haemost. 2001 Mar; 85(3): 560. PMID: 11307831