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1rfy
From Proteopedia
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| - | {{Seed}} | ||
| - | [[Image:1rfy.png|left|200px]] | ||
| - | + | ==Crystal Structure of Quorum-Sensing Antiactivator TraM== | |
| - | + | <StructureSection load='1rfy' size='340' side='right'caption='[[1rfy]], [[Resolution|resolution]] 1.60Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1rfy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RFY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RFY FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rfy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rfy OCA], [https://pdbe.org/1rfy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rfy RCSB], [https://www.ebi.ac.uk/pdbsum/1rfy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rfy ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/TRAM_RHIRD TRAM_RHIRD] Negatively regulates conjugation and the expression of tra genes by antagonizing TraR/AAI-dependent activation. TraM may either bind or modify TraR or AAI making them unavailable. Alternatively, TraM may bind tra promoters preventing TraR activation. | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | < | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rf/1rfy_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | + | </jmolCheckbox> | |
| - | == | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rfy ConSurf]. |
| - | + | <div style="clear:both"></div> | |
| - | + | __TOC__ | |
| - | == | + | </StructureSection> |
| - | < | + | |
[[Category: Agrobacterium tumefaciens]] | [[Category: Agrobacterium tumefaciens]] | ||
| - | [[Category: Cha | + | [[Category: Large Structures]] |
| - | [[Category: Chen | + | [[Category: Cha MR]] |
| - | [[Category: Chen | + | [[Category: Chen G]] |
| - | [[Category: Fuqua | + | [[Category: Chen L]] |
| - | [[Category: Malenkos | + | [[Category: Fuqua C]] |
| - | + | [[Category: Malenkos JW]] | |
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Current revision
Crystal Structure of Quorum-Sensing Antiactivator TraM
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