Template:STRUCTURE 2kdh
From Proteopedia
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{{Structure | {{Structure | ||
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2kdh]], [[NMR_Ensembles_of_Models | 30 NMR models]] (<scene name='initialview01'>default scene</scene>)}}} | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2kdh]], [[NMR_Ensembles_of_Models | 30 NMR models]] (<scene name='initialview01'>default scene</scene>)}}} | ||
- | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Ca+A+2'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Kdh+A+1'>AC2</scene> and <scene name='pdbsite=AC3:AC3'>AC3</scene> | ||
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=KDH:(2R,3R)-5,7-DIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-3,4-DIHYDRO-2H-CHROMEN-3-YL+3,4,5-TRIHYDROXYBENZOATE'>KDH</scene> | |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=KDH:(2R,3R)-5,7-DIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-3,4-DIHYDRO-2H-CHROMEN-3-YL+3,4,5-TRIHYDROXYBENZOATE'>KDH</scene> | ||
|GENE= TNNC1, TNNC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | |GENE= TNNC1, TNNC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | ||
- | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kdh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kdh OCA], [http://www.ebi.ac.uk/pdbsum/2kdh PDBsum], [http://www. | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kdh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kdh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kdh RCSB], [http://www.ebi.ac.uk/pdbsum/2kdh PDBsum]</span> |
+ | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001125 Ipr001125], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002048 Ipr002048], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011992 Ipr011992], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR018247 Ipr018247], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR018248 Ipr018248], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR018249 Ipr018249]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00036 PF00036]</span> | ||
+ | |uPDB=2KDH|CONSURF={{!}}- | ||
+ | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
+ | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
+ | {{!}} '''Toggle Conservation Colors:''' | ||
+ | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
+ | Rows = identical sequences: | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>A [x]</text> | ||
+ | <name>jmb_2kdh_A</name> | ||
+ | <title>toggle chain A</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
}} | }} |
Current revision
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2kdh, 30 NMR models () | |||||||||
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Ligands: | , | ||||||||
Gene: | TNNC1, TNNC (Homo sapiens) | ||||||||
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Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||||
Coordinates: | save as pdb, mmCIF, xml |