Group:SMART:2010 Pingry SMART Team Models
From Proteopedia
(Difference between revisions)
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== AdhD K249G/H255R double mutant and Self-assembly into hydrogels == | == AdhD K249G/H255R double mutant and Self-assembly into hydrogels == | ||
| - | <applet load='AdhD_with_three_cofactors_no_H.pdb' size='400' frame='true' align=' | + | <applet load='AdhD_with_three_cofactors_no_H.pdb' size='400' frame='true' align='right' caption='AdhD K249G/H255R double mutant' scene='2010_Pingry_SMART_Team/Adhd_0/2'/> |
'''Design script:''' | '''Design script:''' | ||
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==PDB ID: 1a80, 2,5-diketo-d-gluconic acid reductase with NADPH (wild-type)== | ==PDB ID: 1a80, 2,5-diketo-d-gluconic acid reductase with NADPH (wild-type)== | ||
| - | <applet load='1a80' size='400' frame='true' align=' | + | <applet load='1a80' size='400' frame='true' align='right' caption='1a80, 2,5-diketo-d-gluconic acid reductase with NADPH (wild-type)' scene='2010_Pingry_SMART_Team/1a80-original/22'/> |
{{Clear}} | {{Clear}} | ||
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==PDB ID: 1m9h, Mutant 2,5-diketo-d-gluconic acid reductase with NADH (mutant)== | ==PDB ID: 1m9h, Mutant 2,5-diketo-d-gluconic acid reductase with NADH (mutant)== | ||
| - | <applet load='1m9h' size='400' frame='true' align=' | + | <applet load='1m9h' size='400' frame='true' align='right' caption='1m9h, Mutant 2,5-diketo-d-gluconic acid reductase with NADH' scene='2010_Pingry_SMART_Team/1m9h_default/1'/> |
{{Clear}} | {{Clear}} | ||
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==PDB ID: 1k8c, Xylose reductase with NADP+== | ==PDB ID: 1k8c, Xylose reductase with NADP+== | ||
| - | <applet load='1K8C_chainD.pdb' size='400' frame='true' align=' | + | <applet load='1K8C_chainD.pdb' size='400' frame='true' align='right' caption='1k8c, Xylose reductase with NADP+' scene='2010_Pingry_SMART_Team/1k8c_nospindefault/1'/> |
{{Clear}} | {{Clear}} | ||
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==PDB ID: 1mi3, Xylose reductase with NAD+== | ==PDB ID: 1mi3, Xylose reductase with NAD+== | ||
| - | <applet load='1MI3_chainA.pdb' size='400' frame='true' align=' | + | <applet load='1MI3_chainA.pdb' size='400' frame='true' align='right' caption='1mi3, Xylose reductase with NAD+' scene='2010_Pingry_SMART_Team/1mi3_nospindefault/1'/> |
{{Clear}} | {{Clear}} | ||
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==PDB ID: 1lwi, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with NADP+ cofactor== | ==PDB ID: 1lwi, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with NADP+ cofactor== | ||
| - | <applet load='1LWI_chainA.pdb' size='400' frame='true' align=' | + | <applet load='1LWI_chainA.pdb' size='400' frame='true' align='right' caption='1lwi, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with NADP+ cofactor' scene='2010_Pingry_SMART_Team/1lwi_default/7'/> |
{{Clear}} | {{Clear}} | ||
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==PDB ID: 1afs, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with cofactor and testosterone== | ==PDB ID: 1afs, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with cofactor and testosterone== | ||
| - | <applet load='1AFS_chainA.pdb' size='400' frame='true' align=' | + | <applet load='1AFS_chainA.pdb' size='400' frame='true' align='right' caption='1afs, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with cofactor and testosterone' scene='2010_Pingry_SMART_Team/1afs_default/7'/> |
{{Clear}} | {{Clear}} | ||
Revision as of 02:32, 8 March 2010
Return to 2010 SMART Team Page: 2010 Pingry SMART Team
AdhD K249G/H255R double mutant and Self-assembly into hydrogels
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Design script:
Select all
Backbone off
Wireframe off
Spacefill off
Cartoon off
Backbone 300
Color white
Select (253-260) or (230-241) or (190-198) or (157-165) or (131-144) or (98-112) or (68-78) or (40-53)
Color [128,255,255]
Select (118-122) or (149-153) or (174-177) or (201-205) or (244-249) or (22-25) or (57-61) or (86-91)
Color [255,128,128]
Select 249 and (sidechain or alpha)
Wireframe 250
Select 249 and sidechain
Color cpk
Select 249 and alpha
Color [0,0,255]
Select 255 and (sidechain or alpha)
Wireframe 250
Select 255 and sidechain
Color cpk
Select 255 and alpha
Color [0,0,255]
PDB ID: 1a80, 2,5-diketo-d-gluconic acid reductase with NADPH (wild-type)
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PDB ID: 1m9h, Mutant 2,5-diketo-d-gluconic acid reductase with NADH (mutant)
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PDB ID: 1k8c, Xylose reductase with NADP+
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PDB ID: 1mi3, Xylose reductase with NAD+
|
PDB ID: 1lwi, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with NADP+ cofactor
|
PDB ID: 1afs, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with cofactor and testosterone
|
Proteopedia Page Contributors and Editors (what is this?)
Tommie Hata, Mai-Lee Picard, Ed Xiao, Florence Ma, Alexander Berchansky, Connie Wang, Jaime Prilusky, Dylan Sun
