1vsp
From Proteopedia
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===Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome. This file, 1VSP, contains the 50S ribosome subunit. 30S ribosome subunit is in the file 2QNH=== | ===Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome. This file, 1VSP, contains the 50S ribosome subunit. 30S ribosome subunit is in the file 2QNH=== | ||
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{{ABSTRACT_PUBMED_17940016}} | {{ABSTRACT_PUBMED_17940016}} | ||
==About this Structure== | ==About this Structure== | ||
- | [[1vsp]] is a 30 chain structure of [[Ribosomal protein L1]], [[Ribosomal protein L2]], [[Ribosomal protein L3]], [[Ribosomal protein L4]], [[Ribosomal protein L5]], [[Ribosomal protein L6]] and [[Ribosome]] with sequence from [http://en.wikipedia.org/wiki/ | + | [[1vsp]] is a 30 chain structure of [[Ribosomal protein L1]], [[Ribosomal protein L13]], [[Ribosomal protein L14]], [[Ribosomal protein L15]], [[Ribosomal protein L16]], [[Ribosomal protein L17]], [[Ribosomal protein L18]], [[Ribosomal protein L19]], [[Ribosomal protein L2]], [[Ribosomal protein L20]], [[Ribosomal protein L21]], [[Ribosomal protein L22]], [[Ribosomal protein L23]], [[Ribosomal protein L24]], [[Ribosomal protein L25]], [[Ribosomal protein L27]], [[Ribosomal protein L28]], [[Ribosomal protein L29]], [[Ribosomal protein L3]], [[Ribosomal protein L30]], [[Ribosomal protein L32]], [[Ribosomal protein L34]], [[Ribosomal protein L35]], [[Ribosomal protein L36]], [[Ribosomal protein L4]], [[Ribosomal protein L5]], [[Ribosomal protein L6]], [[Ribosomal protein L9]] and [[Ribosome]] with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. The January 2010 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''70S Ribosomes'' by David Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2010_1 10.2210/rcsb_pdb/mom_2010_1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VSP OCA]. |
==See Also== | ==See Also== | ||
- | *[[Ribosomal protein L1]] | + | *[[Ribosomal protein L1|Ribosomal protein L1]] |
- | *[[Ribosomal protein L2]] | + | *[[Ribosomal protein L13|Ribosomal protein L13]] |
- | *[[Ribosomal protein L3]] | + | *[[Ribosomal protein L14|Ribosomal protein L14]] |
- | *[[Ribosomal protein L4]] | + | *[[Ribosomal protein L15|Ribosomal protein L15]] |
- | *[[Ribosomal protein L5]] | + | *[[Ribosomal protein L16|Ribosomal protein L16]] |
- | *[[Ribosomal protein L6]] | + | *[[Ribosomal protein L17|Ribosomal protein L17]] |
- | *[[Ribosome]] | + | *[[Ribosomal protein L18|Ribosomal protein L18]] |
+ | *[[Ribosomal protein L19|Ribosomal protein L19]] | ||
+ | *[[Ribosomal protein L2|Ribosomal protein L2]] | ||
+ | *[[Ribosomal protein L20|Ribosomal protein L20]] | ||
+ | *[[Ribosomal protein L21|Ribosomal protein L21]] | ||
+ | *[[Ribosomal protein L22|Ribosomal protein L22]] | ||
+ | *[[Ribosomal protein L23|Ribosomal protein L23]] | ||
+ | *[[Ribosomal protein L24|Ribosomal protein L24]] | ||
+ | *[[Ribosomal protein L25|Ribosomal protein L25]] | ||
+ | *[[Ribosomal protein L27|Ribosomal protein L27]] | ||
+ | *[[Ribosomal protein L28|Ribosomal protein L28]] | ||
+ | *[[Ribosomal protein L29|Ribosomal protein L29]] | ||
+ | *[[Ribosomal protein L3|Ribosomal protein L3]] | ||
+ | *[[Ribosomal protein L30|Ribosomal protein L30]] | ||
+ | *[[Ribosomal protein L32|Ribosomal protein L32]] | ||
+ | *[[Ribosomal protein L34|Ribosomal protein L34]] | ||
+ | *[[Ribosomal protein L35|Ribosomal protein L35]] | ||
+ | *[[Ribosomal protein L36|Ribosomal protein L36]] | ||
+ | *[[Ribosomal protein L4|Ribosomal protein L4]] | ||
+ | *[[Ribosomal protein L5|Ribosomal protein L5]] | ||
+ | *[[Ribosomal protein L6|Ribosomal protein L6]] | ||
+ | *[[Ribosomal protein L9|Ribosomal protein L9]] | ||
+ | *[[Ribosome|Ribosome]] | ||
==Reference== | ==Reference== | ||
- | <ref group="xtra">PMID: | + | <ref group="xtra">PMID:017940016</ref><references group="xtra"/> |
[[Category: 70S Ribosomes]] | [[Category: 70S Ribosomes]] | ||
[[Category: RCSB PDB Molecule of the Month]] | [[Category: RCSB PDB Molecule of the Month]] | ||
- | [[Category: Thermus thermophilus | + | [[Category: Thermus thermophilus]] |
[[Category: Asahara, H.]] | [[Category: Asahara, H.]] | ||
[[Category: Korostelev, A.]] | [[Category: Korostelev, A.]] | ||
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[[Category: Trakhanov, S.]] | [[Category: Trakhanov, S.]] | ||
[[Category: 70s ribosome]] | [[Category: 70s ribosome]] | ||
+ | [[Category: Ribosome]] | ||
[[Category: Shine-dalgarno]] | [[Category: Shine-dalgarno]] |
Revision as of 13:44, 27 July 2012
Contents |
Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome. This file, 1VSP, contains the 50S ribosome subunit. 30S ribosome subunit is in the file 2QNH
Template:ABSTRACT PUBMED 17940016
About this Structure
1vsp is a 30 chain structure of Ribosomal protein L1, Ribosomal protein L13, Ribosomal protein L14, Ribosomal protein L15, Ribosomal protein L16, Ribosomal protein L17, Ribosomal protein L18, Ribosomal protein L19, Ribosomal protein L2, Ribosomal protein L20, Ribosomal protein L21, Ribosomal protein L22, Ribosomal protein L23, Ribosomal protein L24, Ribosomal protein L25, Ribosomal protein L27, Ribosomal protein L28, Ribosomal protein L29, Ribosomal protein L3, Ribosomal protein L30, Ribosomal protein L32, Ribosomal protein L34, Ribosomal protein L35, Ribosomal protein L36, Ribosomal protein L4, Ribosomal protein L5, Ribosomal protein L6, Ribosomal protein L9 and Ribosome with sequence from Thermus thermophilus. The January 2010 RCSB PDB Molecule of the Month feature on 70S Ribosomes by David Goodsell is 10.2210/rcsb_pdb/mom_2010_1. Full crystallographic information is available from OCA.
See Also
- Ribosomal protein L1
- Ribosomal protein L13
- Ribosomal protein L14
- Ribosomal protein L15
- Ribosomal protein L16
- Ribosomal protein L17
- Ribosomal protein L18
- Ribosomal protein L19
- Ribosomal protein L2
- Ribosomal protein L20
- Ribosomal protein L21
- Ribosomal protein L22
- Ribosomal protein L23
- Ribosomal protein L24
- Ribosomal protein L25
- Ribosomal protein L27
- Ribosomal protein L28
- Ribosomal protein L29
- Ribosomal protein L3
- Ribosomal protein L30
- Ribosomal protein L32
- Ribosomal protein L34
- Ribosomal protein L35
- Ribosomal protein L36
- Ribosomal protein L4
- Ribosomal protein L5
- Ribosomal protein L6
- Ribosomal protein L9
- Ribosome
Reference
- Korostelev A, Trakhanov S, Asahara H, Laurberg M, Lancaster L, Noller HF. Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome. Proc Natl Acad Sci U S A. 2007 Oct 23;104(43):16840-3. Epub 2007 Oct 16. PMID:17940016