Sandbox 31
From Proteopedia
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| '''Structure''' | '''Structure''' | ||
| - | Papain is formed from a peptide that is 212 amino acids in length. It consists of 25% <scene name='Sandbox_31/Alpha_helices/3'>Alpha helices</scene> and 21% <scene name='Sandbox_31/Beta_sheet/1'> Beta sheet</scene>. The structure also consists of three <scene name='Sandbox_31/Disulfide/2'>disulfide bonds</scene> between  | + | Papain is formed from a peptide that is 212 amino acids in length. It consists of 25% <scene name='Sandbox_31/Alpha_helices/3'>Alpha helices</scene> and 21% <scene name='Sandbox_31/Beta_sheet/1'> Beta sheet</scene>. The structure also consists of three <scene name='Sandbox_31/Disulfide/2'>disulfide bonds</scene> between <scene name='Sandbox_31/Cys_with_labels/1'>Cysteine residues</scene>.  The disulfide bonds exist between Cys 63 and Cys 22, Cys 200 and Cys 153, and Cys 56 and Cys 95.  Another important residue to the structure is Cysteine 25 which has a sulfhydryl group that plays a major role in the active site activity[[http://www.sigmaaldrich.com/life-science/metabolomics/enzyme-explorer/analytical-enzymes/papain.html]]. | 
| The <scene name='Sandbox_31/Hydrophobic_residues/1'>Hydrophobic Residues</scene> in papain are primarily located toward the inside of the enzyme or paired by hydrophobic interactions with other hydrophobic residues to exclude water.  The <scene name='Sandbox_31/Charged/1'>Charged Residues</scene> are located facing the exterior, in the active site, or paired with other charged residues. | The <scene name='Sandbox_31/Hydrophobic_residues/1'>Hydrophobic Residues</scene> in papain are primarily located toward the inside of the enzyme or paired by hydrophobic interactions with other hydrophobic residues to exclude water.  The <scene name='Sandbox_31/Charged/1'>Charged Residues</scene> are located facing the exterior, in the active site, or paired with other charged residues. | ||
Revision as of 20:42, 6 November 2011
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| Please do NOT make changes to this Sandbox. Sandboxes 30-60 are reserved for use by Biochemistry 410 & 412 at Messiah College taught by Dr. Hannah Tims during Fall 2012 and Spring 2013. | 
Papain (PDB ID #: 9pap)
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