Sandbox 31

Introduction

Papain is a cysteine hydrolase (EC 3.4.22.2) that is found naturally occurring in Papaya(Carica papaya). Papain is extracted from the latex, leaves and roots of the papaya tree. Papain is a protease commonly used for cell isolation, protein structural studies, cleaving antibodies, and various other research techniques. In addition to use in research, it is commonly used in industry to tenderize meats, remove skin from hides, and clean soft contact lenses.

Structure

Papain is formed from a peptide that is 212 amino acids in length. It consists of 25% and 21% . The structure also consists of three between . The disulfide bonds exist between Cys 63 and Cys 22, Cys 200 and Cys 153, and Cys 56 and Cys 95. Another important residue to the structure is Cysteine 25 which has a sulfhydryl group that plays a major role in the active site activity[[1]].

The in papain are primarily located toward the inside of the enzyme or paired by hydrophobic interactions with other hydrophobic residues to exclude water. The are located facing the exterior, in the active site, or paired with other charged residues. The charged and polar residues are hydrophilic therefore do not orient themselves to exclude water. The charged face outward due to their hydrophilic nature.