This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3jtw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3jtw" [edit=sysop:move=sysop])
Line 1: Line 1:
-
{{STRUCTURE_3jtw| PDB=3jtw | SCENE= }}
+
==Crystal structure of Putative dihydrofolate reductase (YP_805003.1) from PEDIOCOCCUS PENTOSACEUS ATCC 25745 at 1.90 A resolution==
-
===Crystal structure of Putative dihydrofolate reductase (YP_805003.1) from PEDIOCOCCUS PENTOSACEUS ATCC 25745 at 1.90 A resolution===
+
<StructureSection load='3jtw' size='340' side='right' caption='[[3jtw]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[3jtw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pediococcus_pentosaceus_atcc_25745 Pediococcus pentosaceus atcc 25745]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JTW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JTW FirstGlance]. <br>
-
[[3jtw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pediococcus_pentosaceus_atcc_25745 Pediococcus pentosaceus atcc 25745]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JTW OCA].
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
 +
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PEPE_1533, YP_805003.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=278197 Pediococcus pentosaceus ATCC 25745])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jtw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jtw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3jtw RCSB], [http://www.ebi.ac.uk/pdbsum/3jtw PDBsum], [http://www.topsan.org/Proteins/JCSG/3jtw TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jt/3jtw_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
*[[Dihydrofolate reductase|Dihydrofolate reductase]]
*[[Dihydrofolate reductase|Dihydrofolate reductase]]
 +
__TOC__
 +
</StructureSection>
[[Category: Pediococcus pentosaceus atcc 25745]]
[[Category: Pediococcus pentosaceus atcc 25745]]
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
[[Category: Structural genomic]]
[[Category: Jcsg]]
[[Category: Jcsg]]
-
[[Category: Joint center for structural genomic]]
 
[[Category: Oxidoreductase]]
[[Category: Oxidoreductase]]
-
[[Category: Protein structure initiative]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Psi-2]]
+
[[Category: Putative dihydrofolate reductase]]
[[Category: Putative dihydrofolate reductase]]
[[Category: Ribd c-terminal domain]]
[[Category: Ribd c-terminal domain]]
-
[[Category: Structural genomic]]
 
[[Category: Yp_805003 1]]
[[Category: Yp_805003 1]]

Revision as of 15:45, 18 December 2014

Crystal structure of Putative dihydrofolate reductase (YP_805003.1) from PEDIOCOCCUS PENTOSACEUS ATCC 25745 at 1.90 A resolution

3jtw, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools