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Chemotaxis protein

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===CheY===
===CheY===
[[1ab6]], [[1d4z]], [[1e6m]], [[1e6k]], [[1e6l]], [[1jbe]], [[1mih]], [[3oo0]], [[3oo1]] – EcCheY (mutant) – ''Escherichia coli''<BR />
[[1ab6]], [[1d4z]], [[1e6m]], [[1e6k]], [[1e6l]], [[1jbe]], [[1mih]], [[3oo0]], [[3oo1]] – EcCheY (mutant) – ''Escherichia coli''<BR />
-
[[3f7n]], [[3fft]], [[3ffw]], [[3ffx]], [[3fgz]], [[3myy]], [[3olv]], [[3olw]], [[3olx]], [[3oly]] - EcCheY (mutant) + BeF3 + Mn<BR />
+
[[1tmy]], [[2tmy]], [[3tmy]], [[4tmy]] - TmCheY – ''Thermotoga maritima''<br />
 +
[[4h60]], [[4hnr]] – VcCheY – ''Vibrio cholerae''<br />
 +
[[4hnq]] - VcCheY (mutant) <br />
 +
[[3gwg]] – HpCheY - ''Helicobacter pylori''<BR />
 +
[[3h1f]], [[3h1g]] - HpCheY (mutant) <BR />
[[2id7]], [[2id9]], [[2idm]] – EcCheY-phosphono (mutant) <BR />
[[2id7]], [[2id9]], [[2idm]] – EcCheY-phosphono (mutant) <BR />
[[1djm]] – EcCheY – NMR<BR />
[[1djm]] – EcCheY – NMR<BR />
 +
[[2chy]] – StCheY - ''Salmonella typhimurium'' <br />
 +
 +
''CheY complexes''
 +
[[1zdm]] – EcCheY + Xe<BR />
[[1zdm]] – EcCheY + Xe<BR />
-
[[3gwg]] – HpCheY - ''Helicobacter pylori''<BR />
 
-
[[3h1f]], [[3h1g]] - HpCheY (mutant) <BR />
 
[[3h1e]] - HpCheY + BeF3 + Mn<BR />
[[3h1e]] - HpCheY + BeF3 + Mn<BR />
 +
[[3f7n]], [[3fft]], [[3ffw]], [[3ffx]], [[3fgz]], [[3myy]], [[3olv]], [[3olw]], [[3olx]], [[3oly]] - EcCheY (mutant) + BeF3 + Mn<BR />
 +
[[4hns]] - VcCheY + BeF3 + Mg<br />
 +
[[4lx8]] - VcCheY + Mg<br />
 +
[[1fqw]] - EcCheY + BeF3 + Mn<br />
 +
[[3rvj]], [[3rvk]], [[3rvl]], [[3rvm]], [[3rvn]], [[3rvo]], [[3rvp]], [[3rvq]], [[3rvr]], [[3rvs]] - EcCheY (mutant) + BeF3 + Mn<br />
[[1bdj]] – EcCheY + aerobic respiration control protein HPT domain<BR />
[[1bdj]] – EcCheY + aerobic respiration control protein HPT domain<BR />
[[1u8t]] – EcCheY + flagellar motor switch protein FLIM<BR />
[[1u8t]] – EcCheY + flagellar motor switch protein FLIM<BR />
-
[[2b1j]] - EcCheY + flagellar motor switch protein FLIM N terminal<br />
+
[[2b1j]], [[1f4v]] - EcCheY + flagellar motor switch protein FLIM N terminal<br />
[[1ffg]], [[1ffs]] – EcCheY + CheA CheY-binding domain<BR />
[[1ffg]], [[1ffs]] – EcCheY + CheA CheY-binding domain<BR />
-
[[1u0s]] - TmCheY response regulating domain + CheA P2 domain –''Thermotoga maritima''<BR />
+
[[1u0s]] - TmCheY response regulating domain + CheA P2 domain <BR />
[[1ffw]] – EcCheY + CheA CheY-binding domain + imido phosphate<BR />
[[1ffw]] – EcCheY + CheA CheY-binding domain + imido phosphate<BR />
[[1kmi]] - EcCheY + CheZ<BR />
[[1kmi]] - EcCheY + CheZ<BR />
-
[[2fka]], [[2flk]], [[2flw]], [[2fmf]], [[2fmh]], [[2fmi]], [[2fmk]], [[2pl9]], [[2pmc]] – StCheY + CheZ peptide - ''Salmonella typhimurium''<BR />
+
[[2lp4]] - EcCheY + CheA<br />
 +
[[2fka]], [[2flk]], [[2flw]], [[2fmf]], [[2fmh]], [[2fmi]], [[2fmk]], [[2pl9]], [[2pmc]] – StCheY + CheZ peptide <BR />
 +
[[2che]], [[2chf]] – StCheY + Mg<br />
 +
[[4iga]] - TmCheY + flagellar motor switch protein FLIM peptide<br />
 +
 
===CheX===
===CheX===
 +
[[1xko]]– TmCheX<BR />
[[1xko]]– TmCheX<BR />
[[3hm4]] – CheX – ''Desulfovibrio desulfuricans''<BR />
[[3hm4]] – CheX – ''Desulfovibrio desulfuricans''<BR />
 +
[[3hzh]] – CheX + Che-3 – ''Borrelia burgdorferi''<br />
 +
===CheC===
===CheC===
 +
[[1xkr]] – TmCheC<BR />
[[1xkr]] – TmCheC<BR />
[[2f9z]] – TmCheC + CheD<BR />
[[2f9z]] – TmCheC + CheD<BR />
[[3qta]] – CheC – ''Haloarcula marismortui''<BR />
[[3qta]] – CheC – ''Haloarcula marismortui''<BR />
 +
===CheR===
===CheR===
 +
[[1bc5]] – StCheR + chemotaxis receptor peptide <BR />
[[1bc5]] – StCheR + chemotaxis receptor peptide <BR />
 +
[[1af7]] – StCheR<br />
 +
===CheA===
===CheA===
 +
 +
[[1fwp]] – EcCheA – NMR<br />
[[1b3q]] – TmCheA dimerization, kinase and regulatory domains <BR />
[[1b3q]] – TmCheA dimerization, kinase and regulatory domains <BR />
[[1i5n]] – StCheA P1 domain<br />
[[1i5n]] – StCheA P1 domain<br />
Line 45: Line 70:
[[1tqg]] – TmCheA phosphotransferase domain<br />
[[1tqg]] – TmCheA phosphotransferase domain<br />
[[2ld6]] – TmCheA HPT domain - NMR<BR />
[[2ld6]] – TmCheA HPT domain - NMR<BR />
-
[[2ch4]] - TmCheA kinase and regulatory domains + CheW
+
[[2ch4]] - TmCheA kinase and regulatory domains + CheW<br />
 +
[[3ur1]], [[4jpb]] – TmCheA + CheW + methyl-accepting Che<br />
 +
 
 +
===CheB===
 +
 
 +
[[1a2o]], [[1chd]]– StCheB<br />
 +
 
===CheW===
===CheW===
 +
[[1k0s]] – TmCheW<br />
[[1k0s]] – TmCheW<br />
-
[[2h09]] – EcCheW - NMR<BR />
+
[[2ho9]] – EcCheW - NMR<BR />
 +
 
 +
===Aspartate chemotaxis receptor===
 +
 
 +
[[1jmw]], [[1vls]] – StChe LBD<br />
 +
[[1lih]] – StChe LBD (mutant)<br />
 +
[[1was]] – StChe LBD<br />
 +
[[1wat]], [[1vlt]], [[2lig]] – StChe LBD + aspartate<br />
 +
[[2asr]] – EcChe <br />
 +
 
===Methyl-accepting chemotaxis protein===
===Methyl-accepting chemotaxis protein===
 +
[[1xbn]] – TtMche – ''Thermoanaerobacter tengcongensis''<BR />
[[1xbn]] – TtMche – ''Thermoanaerobacter tengcongensis''<BR />
 +
[[2m7u]], [[2m7v]] – TeMche – ''Thermosynechococcus elongatus''<br />
 +
[[3vv4]] – TeMche GAF domain<br />
 +
[[4fof]], [[4glq]] – TeMche GAF domain (mutant)<br />
 +
[[3w2z – Mche residues 221-397 – Nostoc<br />
[[3eee]], [[3iqb]], [[3lah]], [[3lai]], [[3sj5]] – TtMche H-Nox domain (mutant) <BR />
[[3eee]], [[3iqb]], [[3lah]], [[3lai]], [[3sj5]] – TtMche H-Nox domain (mutant) <BR />
-
[[3tf0]], [[3tf1]] - TtMche H-Nox domain<BR />
+
[[3tf0]], [[3tf1]], [[1u4h]], [[1u55]], [[1u56]] - TtMche H-Nox domain<BR />
[[3m0b]] - TtMche H-Nox domain Ru-porphyrin<BR />
[[3m0b]] - TtMche H-Nox domain Ru-porphyrin<BR />
[[3nvr]], [[3nvu]] – TtMche N terminal (mutant) <BR />
[[3nvr]], [[3nvu]] – TtMche N terminal (mutant) <BR />
Line 58: Line 104:
[[3g6b]] – TmMche (mutant) <BR />
[[3g6b]] – TmMche (mutant) <BR />
[[2ch7]] – TmMche cytoplasmic domain<BR />
[[2ch7]] – TmMche cytoplasmic domain<BR />
-
[[1qu7]], [[2l9g]] – EcCheI cytoplasmic domain<BR />
+
[[1qu7]], [[2l9g]] – EcMcheI cytoplasmic domain<BR />
-
[[2ld6]] – EcChe peptide - NMR<BR />
+
[[2ld6]] – EcMche peptide - NMR<BR />
-
[[3atp]] - EcCheI ligand-binding domain + serine<BR />
+
[[3atp]] - EcMcheI LBD + serine<BR />
-
[[1jmw]] - StChe ligand-binding domain (mutant) <BR />
+
[[2d4u]] – EcMcheI LBD (mutant)<br />
-
[[2qhk]] – Che residues 31-203 – ''Vibrio parahaemolyticus''<BR />
+
[[1jmw]] - StMche LBD (mutant) <BR />
-
[[3c8c]] – Che N-terminal – ''Vibrio cholerae''<BR />
+
[[2qhk]], [[4exo]] – Mche N-terminal – ''Vibrio parahaemolyticus''<BR />
-
[[3b47]] – Che periplasmic domain – ''Geobacter sulfurreducens''<BR />
+
[[3c8c]] – Mche N-terminal <BR />
 +
[[3b47]] – Mche periplasmic domain – ''Geobacter sulfurreducens''<BR />
 +
[[4it2]] - Mche H-Nox domain Mn-porphyrin – ''Caldanaerobacter subterraneus''<br />
 +
 
===Flagellar motor protein FLIN===
===Flagellar motor protein FLIN===
 +
[[1yab]] – TmFLIN<BR />
[[1yab]] – TmFLIN<BR />
 +
===Chemotaxis protein MotB===
===Chemotaxis protein MotB===
-
[[3cyp]], [[3imp]] – HpMotB C terminal<br />
+
 
 +
[[3cyp]], [[3imp]], [[3s02]], [[3s03]], [[3s06]], [[3s0h]], [[3s0w]], [[3s0y]] – HpMotB C terminal<br />
[[3cyq]] – HpMotB C terminal + N-acetylmuramic acid<BR />
[[3cyq]] – HpMotB C terminal + N-acetylmuramic acid<BR />
[[2zov]], [[2zvy]], [[2zvz]] - StMotB C terminal<br />
[[2zov]], [[2zvy]], [[2zvz]] - StMotB C terminal<br />
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 07:45, 20 February 2014

Template:STRUCTURE 1e6m

Chemotaxis proteins direct cell movement according to certain chemicals in their environment. For details on chemotaxis protein see

Contents

3D structures of chemotaxis protein

Updated on 20-February-2014

CheY

1ab6, 1d4z, 1e6m, 1e6k, 1e6l, 1jbe, 1mih, 3oo0, 3oo1 – EcCheY (mutant) – Escherichia coli
1tmy, 2tmy, 3tmy, 4tmy - TmCheY – Thermotoga maritima
4h60, 4hnr – VcCheY – Vibrio cholerae
4hnq - VcCheY (mutant)
3gwg – HpCheY - Helicobacter pylori
3h1f, 3h1g - HpCheY (mutant)
2id7, 2id9, 2idm – EcCheY-phosphono (mutant)
1djm – EcCheY – NMR
2chy – StCheY - Salmonella typhimurium

CheY complexes

1zdm – EcCheY + Xe
3h1e - HpCheY + BeF3 + Mn
3f7n, 3fft, 3ffw, 3ffx, 3fgz, 3myy, 3olv, 3olw, 3olx, 3oly - EcCheY (mutant) + BeF3 + Mn
4hns - VcCheY + BeF3 + Mg
4lx8 - VcCheY + Mg
1fqw - EcCheY + BeF3 + Mn
3rvj, 3rvk, 3rvl, 3rvm, 3rvn, 3rvo, 3rvp, 3rvq, 3rvr, 3rvs - EcCheY (mutant) + BeF3 + Mn
1bdj – EcCheY + aerobic respiration control protein HPT domain
1u8t – EcCheY + flagellar motor switch protein FLIM
2b1j, 1f4v - EcCheY + flagellar motor switch protein FLIM N terminal
1ffg, 1ffs – EcCheY + CheA CheY-binding domain
1u0s - TmCheY response regulating domain + CheA P2 domain
1ffw – EcCheY + CheA CheY-binding domain + imido phosphate
1kmi - EcCheY + CheZ
2lp4 - EcCheY + CheA
2fka, 2flk, 2flw, 2fmf, 2fmh, 2fmi, 2fmk, 2pl9, 2pmc – StCheY + CheZ peptide
2che, 2chf – StCheY + Mg
4iga - TmCheY + flagellar motor switch protein FLIM peptide

CheX

1xko– TmCheX
3hm4 – CheX – Desulfovibrio desulfuricans
3hzh – CheX + Che-3 – Borrelia burgdorferi

CheC

1xkr – TmCheC
2f9z – TmCheC + CheD
3qta – CheC – Haloarcula marismortui

CheR

1bc5 – StCheR + chemotaxis receptor peptide
1af7 – StCheR

CheA

1fwp – EcCheA – NMR
1b3q – TmCheA dimerization, kinase and regulatory domains
1i5n – StCheA P1 domain
1i58, 1i59, 1i5a, 1i5b, 1i5d - TmCheA P4 domain + ATP analog
1i5c - TmCheA P4 domain (mutant) + ADP
1tqg – TmCheA phosphotransferase domain
2ld6 – TmCheA HPT domain - NMR
2ch4 - TmCheA kinase and regulatory domains + CheW
3ur1, 4jpb – TmCheA + CheW + methyl-accepting Che

CheB

1a2o, 1chd– StCheB

CheW

1k0s – TmCheW
2ho9 – EcCheW - NMR

Aspartate chemotaxis receptor

1jmw, 1vls – StChe LBD
1lih – StChe LBD (mutant)
1was – StChe LBD
1wat, 1vlt, 2lig – StChe LBD + aspartate
2asr – EcChe

Methyl-accepting chemotaxis protein

1xbn – TtMche – Thermoanaerobacter tengcongensis
2m7u, 2m7v – TeMche – Thermosynechococcus elongatus
3vv4 – TeMche GAF domain
4fof, 4glq – TeMche GAF domain (mutant)
[[3w2z – Mche residues 221-397 – Nostoc
3eee, 3iqb, 3lah, 3lai, 3sj5 – TtMche H-Nox domain (mutant)
3tf0, 3tf1, 1u4h, 1u55, 1u56 - TtMche H-Nox domain
3m0b - TtMche H-Nox domain Ru-porphyrin
3nvr, 3nvu – TtMche N terminal (mutant)
3g67 – TmMche
3g6b – TmMche (mutant)
2ch7 – TmMche cytoplasmic domain
1qu7, 2l9g – EcMcheI cytoplasmic domain
2ld6 – EcMche peptide - NMR
3atp - EcMcheI LBD + serine
2d4u – EcMcheI LBD (mutant)
1jmw - StMche LBD (mutant)
2qhk, 4exo – Mche N-terminal – Vibrio parahaemolyticus
3c8c – Mche N-terminal
3b47 – Mche periplasmic domain – Geobacter sulfurreducens
4it2 - Mche H-Nox domain Mn-porphyrin – Caldanaerobacter subterraneus

Flagellar motor protein FLIN

1yab – TmFLIN

Chemotaxis protein MotB

3cyp, 3imp, 3s02, 3s03, 3s06, 3s0h, 3s0w, 3s0y – HpMotB C terminal
3cyq – HpMotB C terminal + N-acetylmuramic acid
2zov, 2zvy, 2zvz - StMotB C terminal

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman, Lynmarie K Thompson, Alexander Berchansky

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