Sandbox Reserved 806

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==Residues==
==Residues==
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Pictured in yellow are the <scene name='56/563218/Hydrophobic_residues_rotated/1'>hydrophobic residues</scene>. Note that they are primarily in place of the beta sheets.
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Pictured in yellow are the <scene name='56/563218/Hydrophobic_residues_rotated/1'>hydrophobic residues</scene>.
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The <scene name='56/563218/Polarcharged_residues/1'>polar, charged residues</scene> are pictured in green. Note that they are on the outer part where the helices were.
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The <scene name='56/563218/Polarcharged_residues/1'>polar, charged residues</scene> are pictured in green.
==Solvent Accessibility==
==Solvent Accessibility==
<scene name='56/563218/Waters/1'>Water molecules</scene> are pictured in dark blue. They are mostly located between the beta sheets and alpha helices, in a diagonal line, closer to where the monomers connect to form a dimer.
<scene name='56/563218/Waters/1'>Water molecules</scene> are pictured in dark blue. They are mostly located between the beta sheets and alpha helices, in a diagonal line, closer to where the monomers connect to form a dimer.

Revision as of 20:08, 13 October 2013

This Sandbox is Reserved from Oct 10, 2013, through May 20, 2014 for use in the course "CHEM 410 Biochemistry 1 and 2" taught by Hanna Tims at the Messiah College. This reservation includes Sandbox Reserved 780 through Sandbox Reserved 807.
To get started:
  • Click the edit this page tab at the top. Save the page after each step, then edit it again.
  • Click the 3D button (when editing, above the wikitext box) to insert Jmol.
  • show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
  • Add a description of your scene. Use the buttons above the wikitext box for bold, italics, links, headlines, etc.

More help: Help:Editing

Triosephosphate Isomerase

Drag the structure with the mouse to rotate

Contents

Introduction

This is Triosephosphate isomerase, an enzyme in the glycolytic pathway. It is a dimer, but can function as a .

3D Structure

The contains alpha helices (gold) and beta sheets (purple). Overall, it forms a beta barrel motif.

Residues

Pictured in yellow are the . The are pictured in green.

Solvent Accessibility

are pictured in dark blue. They are mostly located between the beta sheets and alpha helices, in a diagonal line, closer to where the monomers connect to form a dimer.

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