We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.
1c8g
From Proteopedia
(Difference between revisions)
| Line 2: | Line 2: | ||
<StructureSection load='1c8g' size='340' side='right' caption='[[1c8g]], [[Resolution|resolution]] 3.00Å' scene=''> | <StructureSection load='1c8g' size='340' side='right' caption='[[1c8g]], [[Resolution|resolution]] 3.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1c8g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1c8g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Fplv Fplv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C8G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1C8G FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ijs|1ijs]], [[4dpv|4dpv]], [[2cas|2cas]], [[1fpv|1fpv]], [[1mvm|1mvm]], [[1c8d|1c8d]], [[1c8e|1c8e]], [[1c8f|1c8f]], [[1c8h|1c8h]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ijs|1ijs]], [[4dpv|4dpv]], [[2cas|2cas]], [[1fpv|1fpv]], [[1mvm|1mvm]], [[1c8d|1c8d]], [[1c8e|1c8e]], [[1c8f|1c8f]], [[1c8h|1c8h]]</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1c8g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c8g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1c8g RCSB], [http://www.ebi.ac.uk/pdbsum/1c8g PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1c8g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c8g OCA], [http://pdbe.org/1c8g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1c8g RCSB], [http://www.ebi.ac.uk/pdbsum/1c8g PDBsum]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[http://www.uniprot.org/uniprot/ | + | [[http://www.uniprot.org/uniprot/CAPSD_FPV19 CAPSD_FPV19]] Capsid protein self-assembles to form an icosahedral capsid with a T=1 symmetry, about 22 nm in diameter, and consisting of 60 copies of two size variants of the capsid proteins, VP1 and VP2, which differ by the presence of an N-terminal extension in the minor protein VP1. The capsid encapsulates the genomic ssDNA. Capsid proteins are responsible for the attachment to host cell receptors. This attachment induces virion internalization predominantly through clathrin-dependent endocytosis. Binding to the host receptors also induces capsid rearrangements leading to surface exposure of VP1 N-terminus, specifically its phospholipase A2-like region and putative nuclear localization signal(s). VP1 N-terminus might serve as a lipolytic enzyme to breach the endosomal membrane during entry into host cell and might contribute to virus transport to the nucleus (By similarity). |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 27: | Line 27: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 1c8g" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| Line 34: | Line 35: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Fplv]] |
[[Category: Rossmann, M G]] | [[Category: Rossmann, M G]] | ||
[[Category: Simpson, A A]] | [[Category: Simpson, A A]] | ||
Revision as of 02:11, 12 September 2015
FELINE PANLEUKOPENIA VIRUS EMPTY CAPSID STRUCTURE
| |||||||||||

