Sandbox Reserved 954

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 30: Line 30:
===Conformational changes of serpins===
===Conformational changes of serpins===
-
The inhibitory members of serpin family undergo an unusual conformational change, the Stressed to Relaxed transition. This structural transition causes the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> insertion into <scene name='60/604473/A_beta_sheet/3'>A β-sheet</scene> thereby the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> forms an extra β strand. The serpin conformational change is essential for the inhibitor mechanism of proteases. <scene name='60/604473/Rcl_insertion_into_beta_sheet/1'>Some amino-acids of RCL</scene> wich belong to a consensus sequence for inhibitory serpins are thought to permit the insertion of the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> into the <scene name='60/604473/A_beta_sheet/3'>A β-sheet</scene>.<ref> James C Whisstocka, 2, Richard Skinnera, 2, Robin W Carrella, Arthur M Leska, Conformational changes in serpins: I. the native and cleaved conformations of α1-antitrypsin1, http://www.sciencedirect.com/science/article/pii/S0022283699935209 DOI:10.1006/jmbi.1999.3520</ref>
+
The inhibitory members of serpin family undergo an unusual conformational change, the Stressed to Relaxed transition. This structural transition causes the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> insertion into <scene name='60/604473/A_beta_sheet/3'>A β-sheet</scene> thereby the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> forms an extra β strand. The serpin conformational change is essential for the inhibitor mechanism of proteases. <scene name='60/604473/Rcl_insertion_into_beta_sheet/1'>Some amino-acids of RCL</scene> wich belong to a consensus sequence for inhibitory serpins are thought to permit the insertion of the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> into the <scene name='60/604473/A_beta_sheet/3'>A β-sheet</scene>.<ref> James C Whisstocka, 2, Richard Skinnera, 2, Robin W Carrella, Arthur M Leska, Conformational changes in serpins: I. the native and cleaved conformations of α1-antitrypsin1, http://www.sciencedirect.com/science/article/pii/S0022283699935209 DOI:10.1006/jmbi.1999.3520</ref>Key regions able to control and modulate the conformational change of RCL. The hinge which is the P15-P9 portion of the RCL. This region is responsible for the mobility which is essential during the conformational change in the Stress to Relax transition. The breach is situated in the top of the β-sheet. It is located at the point of initial insertion of the RCL into the A β-sheet. The shutter is next to the A-β sheet. It facilitates the beta-sheet opening and accept the conserved hinge of the RCL as it insert. The gate is fully inserted into the A β-sheet without cleavage, the RCL has to pass around the β-turn linking strands.
-
[[Image:Structure region.jpg|center|thumbnail|300px|'''Key regions able to control and modulate the conformational change of RCL''']]
+
 
 +
[[Image:Structure region.jpg|center|thumbnail|300px|'''Key regions able to control and modulate the conformational change of RCL<ref>PMID :11116082</ref>''']]
==Main SCCA1 function==
==Main SCCA1 function==

Revision as of 17:31, 9 January 2015

SQUAMOUS CELL CARCINOMA ANTIGEN 1

Tridimensional structure of Squamous cell carcinoma antigen 1 (PDB code 2zv6)

Drag the structure with the mouse to rotate
Personal tools