NADP-dependent malic enzyme
From Proteopedia
(Difference between revisions)
Line 34: | Line 34: | ||
== In structures == | == In structures == | ||
Lysozyme is found in 595 PDB entries<br> | Lysozyme is found in 595 PDB entries<br> | ||
- | <br><b>Homo sapiens</b> (1 PDB entries): <br> | + | <br>Eukaryota (16 PDB entries): <br><br><b>Homo sapiens</b> (1 PDB entries): <br> |
[[4uis]] <div class="pdb-prints 4uis"></div><br><br>Title: The cryoEM structure of human gamma-Secretase complex<br> | [[4uis]] <div class="pdb-prints 4uis"></div><br><br>Title: The cryoEM structure of human gamma-Secretase complex<br> | ||
Experimental EM map [http://www.ebi.ac.uk/pdbe/entry/emdb/emd-2974 emd-2974]. <br> | Experimental EM map [http://www.ebi.ac.uk/pdbe/entry/emdb/emd-2974 emd-2974]. <br> | ||
4.4 A resolution <br> | 4.4 A resolution <br> | ||
Other macromolecules also in this entry: GAMMA-SECRETASE, Nicastrin, Presenilin-1 NTF subunit, . <br><br> | Other macromolecules also in this entry: GAMMA-SECRETASE, Nicastrin, Presenilin-1 NTF subunit, . <br><br> | ||
- | + | <br><b>Hevea brasiliensis</b> (7 PDB entries): <br> | |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
[[1kqy]] <div class="pdb-prints 1kqy"></div><br><br>Title: Hevamine Mutant D125A/E127A/Y183F in Complex with Penta-NAG<br> | [[1kqy]] <div class="pdb-prints 1kqy"></div><br><br>Title: Hevamine Mutant D125A/E127A/Y183F in Complex with Penta-NAG<br> | ||
1.92 A resolution <br> | 1.92 A resolution <br> | ||
<br> | <br> | ||
- | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Hevea brasiliensis"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b> | + | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Hevea brasiliensis"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Meretrix lusoria</b> (3 PDB entries): <br> |
- | [[ | + | [[4pj2]] <div class="pdb-prints 4pj2"></div><br><br>Title: Crystal structure of Aeromonas hydrophila PliI in complex with Meretrix lusoria lysozyme<br> |
- | + | 1.24 A resolution <br> | |
- | <br> | + | Other macromolecules also in this entry: Putative exported protein, . <br><br> |
- | <br> | + | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Meretrix lusoria"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Antheraea mylitta</b> (1 PDB entries): <br> |
- | + | ||
- | + | ||
- | + | ||
- | <br><b>Antheraea mylitta</b> (1 PDB entries): <br> | + | |
[[1iiz]] <div class="pdb-prints 1iiz"></div><br><br>Title: Crystal Structure of the Induced Antibacterial Protein from Tasar Silkworm, Antheraea mylitta<br> | [[1iiz]] <div class="pdb-prints 1iiz"></div><br><br>Title: Crystal Structure of the Induced Antibacterial Protein from Tasar Silkworm, Antheraea mylitta<br> | ||
2.4 A resolution <br> | 2.4 A resolution <br> | ||
+ | <br> | ||
+ | <br><b>Ruditapes philippinarum</b> (1 PDB entries): <br> | ||
+ | [[2dqa]] <div class="pdb-prints 2dqa"></div><br><br>Title: Crystal Structure of Tapes japonica Lysozyme<br> | ||
+ | 1.6 A resolution <br> | ||
<br> | <br> | ||
<br><b>Mus musculus</b> (1 PDB entries): <br> | <br><b>Mus musculus</b> (1 PDB entries): <br> | ||
Line 71: | Line 63: | ||
2.5 A resolution <br> | 2.5 A resolution <br> | ||
<br> | <br> | ||
- | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Bombyx mori"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b> | + | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Bombyx mori"&molecule_name:"Lysozyme" Search for other PDB entries]<br>Viruses (578 PDB entries): <br><br><b>Enterobacteria phage P22</b> (2 PDB entries): <br> |
- | [[ | + | [[2anv]] <div class="pdb-prints 2anv"></div><br><br>Title: crystal structure of P22 lysozyme mutant L86M<br> |
- | 1. | + | 1.04 A resolution <br> |
+ | <br> | ||
+ | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage P22"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Enterobacteria phage P21</b> (2 PDB entries): <br> | ||
+ | [[3hdf]] <div class="pdb-prints 3hdf"></div><br><br>Title: Crystal structure of truncated endolysin R21 from phage 21<br> | ||
+ | 1.7 A resolution <br> | ||
<br> | <br> | ||
- | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:" | + | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage P21"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Enterobacteria phage T4</b> (561 PDB entries): <br> |
[[1swy]] <div class="pdb-prints 1swy"></div><br><br>Title: Use of a Halide Binding Site to Bypass the 1000-atom Limit to Ab initio Structure Determination<br> | [[1swy]] <div class="pdb-prints 1swy"></div><br><br>Title: Use of a Halide Binding Site to Bypass the 1000-atom Limit to Ab initio Structure Determination<br> | ||
1.06 A resolution <br> | 1.06 A resolution <br> | ||
<br> | <br> | ||
- | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage T4"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b> | + | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage T4"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Escherichia phage T5</b> (1 PDB entries): <br> |
- | [[ | + | [[2mxz]] <div class="pdb-prints 2mxz"></div><br><br>Title: Bacteriophage T5 l-alanoyl-d-glutamate peptidase comlpex with Zn2+ (Endo T5-ZN2+)<br> |
- | + | N/A A resolution <br> | |
<br> | <br> | ||
- | + | <br><b>Enterobacteria phage lambda</b> (3 PDB entries): <br> | |
[[1am7]] <div class="pdb-prints 1am7"></div><br><br>Title: Lysozyme from bacteriophage lambda<br> | [[1am7]] <div class="pdb-prints 1am7"></div><br><br>Title: Lysozyme from bacteriophage lambda<br> | ||
2.3 A resolution <br> | 2.3 A resolution <br> | ||
<br> | <br> | ||
- | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage lambda"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b> | + | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage lambda"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Streptococcus phage CP-7</b> (1 PDB entries): <br> |
- | [[ | + | [[4cvd]] <div class="pdb-prints 4cvd"></div><br><br>Title: Crystal structure of the central repeat of cell wall binding module of Cpl7<br> |
- | 1. | + | 1.666 A resolution <br> |
- | + | <br> | |
- | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:" | + | <br><b>Enterobacteria phage P1</b> (2 PDB entries): <br> |
- | [[ | + | [[1xju]] <div class="pdb-prints 1xju"></div><br><br>Title: Crystal structure of secreted inactive form of P1 phage endolysin Lyz<br> |
- | 1. | + | 1.07 A resolution <br> |
+ | <br> | ||
+ | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Enterobacteria phage P1"&molecule_name:"Lysozyme" Search for other PDB entries]<br><b>Streptococcus phage Cp-1</b> (6 PDB entries): <br> | ||
+ | [[2j8g]] <div class="pdb-prints 2j8g"></div><br><br>Title: Crystal structure of the modular Cpl-1 endolysin complexed with a peptidoglycan analogue (E94Q mutant in complex with a tetrasaccharide- pentapeptide)<br> | ||
+ | 1.69 A resolution <br> | ||
<br> | <br> | ||
+ | [http://www.ebi.ac.uk/pdbe/entry/search/index?organism_scientific:"Streptococcus phage Cp-1"&molecule_name:"Lysozyme" Search for other PDB entries]<br>Bacteria (1 PDB entries): <br><br><b>Enterobacteria phage T4</b> (1 PDB entries): <br> | ||
+ | [[2qb0]] <div class="pdb-prints 2qb0"></div><br><br>Title: Structure of the 2TEL crystallization module fused to T4 lysozyme with an Ala-Gly-Pro linker.<br> | ||
+ | 2.56 A resolution <br> | ||
+ | Other macromolecules also in this entry: Transcription factor ETV6, . <br><br> | ||
<br><b>Escherichia coli</b> (1 PDB entries): <br> | <br><b>Escherichia coli</b> (1 PDB entries): <br> | ||
[[2qb0]] <div class="pdb-prints 2qb0"></div><br><br>Title: Structure of the 2TEL crystallization module fused to T4 lysozyme with an Ala-Gly-Pro linker.<br> | [[2qb0]] <div class="pdb-prints 2qb0"></div><br><br>Title: Structure of the 2TEL crystallization module fused to T4 lysozyme with an Ala-Gly-Pro linker.<br> | ||
2.56 A resolution <br> | 2.56 A resolution <br> | ||
Other macromolecules also in this entry: Transcription factor ETV6, . <br><br> | Other macromolecules also in this entry: Transcription factor ETV6, . <br><br> |
Revision as of 15:40, 9 September 2015
Lysozyme
|