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User:Cody Couperus/Sandbox 3
From Proteopedia
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==Structure (building blocks)== | ==Structure (building blocks)== | ||
Stem loop | Stem loop | ||
| + | |||
Coaxial helices | Coaxial helices | ||
| + | |||
Kink-turn | Kink-turn | ||
| + | |||
Hook-turn | Hook-turn | ||
| + | |||
Ribose zipper | Ribose zipper | ||
| + | |||
Kissing loops | Kissing loops | ||
| + | |||
Hairpin loops | Hairpin loops | ||
| + | |||
Pseudoknots | Pseudoknots | ||
| + | |||
A-minor interactions | A-minor interactions | ||
| + | |||
A-major interactions | A-major interactions | ||
| + | |||
Tetraloop-receptor motifs | Tetraloop-receptor motifs | ||
| + | |||
T-loop motif | T-loop motif | ||
| + | |||
Triple stranded RNA | Triple stranded RNA | ||
| + | |||
RNA quadruplex structuers | RNA quadruplex structuers | ||
| + | |||
Metal chelation | Metal chelation | ||
Revision as of 18:49, 16 February 2016
Contents |
RNA
Introduction
-single stranded polynucleic acid -Transcribed from DNA by family of RNA polymerases -Functional roles include functional transfer for protein synthesis, catalysis, cellular regulation -Degraded by....
Products of Transcription
Names/functional roles
Post/Co-transcriptional modifications
Degradation pathways
Structure General
Summary of - how to build a 3D structure from a linear medium. Practical considerations. How to think about folded polymers. Backbone Ribose Bases + base pairing Forces: stacking (VDW), hydrogen bond, hydrophobic effect, electrostatic
Primary Structure
Sequence Maybe some statistics?
Structure (building blocks)
Stem loop
Coaxial helices
Kink-turn
Hook-turn
Ribose zipper
Kissing loops
Hairpin loops
Pseudoknots
A-minor interactions
A-major interactions
Tetraloop-receptor motifs
T-loop motif
Triple stranded RNA
RNA quadruplex structuers
Metal chelation
