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Binding of NTS to the binding site is enriched by <scene name='72/721539/Binding_pocket_surface/4'>charge complementarity</scene> (PDB code:[http://www.rcsb.org/pdb/explore/explore.do?structureId=4GRV 4GRV)]between the positive NTS arginine side chains and the [https://en.wikipedia.org/wiki/Electronegativity electronegative] pocket. In addition, the C-terminus forms a <scene name='72/721539/Binding_site_charges/4'>salt bridge</scene> (PDB code:[http://www.rcsb.org/pdb/explore/explore.do?structureId=4GRV 4GRV)] with R328. Only three out of eight [https://en.wikipedia.org/wiki/Hydrogen_bond hydrogen bonds] are made between the side chains of NTS and the receptor. Most of the interactions are [https://en.wikipedia.org/wiki/Van_der_Waals_force van der Waals] interactions. The binding pocket is partially capped by a <scene name='72/721539/B-hairpin_loop/1'>Β-hairpin loop</scene> at the proximal end of the receptor protein's N-terminus.<ref name="White"/>
Binding of NTS to the binding site is enriched by <scene name='72/721539/Binding_pocket_surface/4'>charge complementarity</scene> (PDB code:[http://www.rcsb.org/pdb/explore/explore.do?structureId=4GRV 4GRV)]between the positive NTS arginine side chains and the [https://en.wikipedia.org/wiki/Electronegativity electronegative] pocket. In addition, the C-terminus forms a <scene name='72/721539/Binding_site_charges/4'>salt bridge</scene> (PDB code:[http://www.rcsb.org/pdb/explore/explore.do?structureId=4GRV 4GRV)] with R328. Only three out of eight [https://en.wikipedia.org/wiki/Hydrogen_bond hydrogen bonds] are made between the side chains of NTS and the receptor. Most of the interactions are [https://en.wikipedia.org/wiki/Van_der_Waals_force van der Waals] interactions. The binding pocket is partially capped by a <scene name='72/721539/B-hairpin_loop/1'>Β-hairpin loop</scene> at the proximal end of the receptor protein's N-terminus.<ref name="White"/>
=== Hydrophobic Stacking ===
=== Hydrophobic Stacking ===
-
A major player in the transduction of the extracellular signal to the intracellular G protein is the <scene name='72/727765/Hydrogen_bonding_network/3'>hydrogen bonding network</scene> (PDB code:[http://www.rcsb.org/pdb/explore/explore.do?structureId=4GRV 4GRV)]that links the bound hormone with the [https://en.wikipedia.org/wiki/Hydrophobe hydrophobic] core of the neurotensin receptor. The carboxylate of L13 forms a hydrogen bond network with R327, R328, and Y324. The Y324, in turn, is brought into an orientation to make the formation of a <scene name='72/727765/Hydrophobic_stacking_4xee/2'>hydrophobic stacking</scene> (PDB Code:[http://www.rcsb.org/pdb/explore/explore.do?structureId=4XEE 4XEE]) network between F358, W321, A157, and F317 possible.<ref name="Krumm">PMID:23051748</ref> The conformational changes caused by this stacking allows for the signal to be moved from the extracellular binding site through the transmembrane helices of the receptor to the intracellular region activating the G protein.
+
A major player in the transduction of the extracellular signal to the intracellular G protein is the <scene name='72/727765/Hydrogen_bonding_network/4'>hydrogen bonding network</scene> (PDB code:[http://www.rcsb.org/pdb/explore/explore.do?structureId=4GRV 4GRV)]that links the bound hormone with the [https://en.wikipedia.org/wiki/Hydrophobe hydrophobic] core of the neurotensin receptor. The carboxylate of L13 forms a hydrogen bond network with R327, R328, and Y324. The Y324, in turn, is brought into an orientation to make the formation of a <scene name='72/727765/Hydrophobic_stacking_4xee/2'>hydrophobic stacking</scene> (PDB Code:[http://www.rcsb.org/pdb/explore/explore.do?structureId=4XEE 4XEE]) network between F358, W321, A157, and F317 possible.<ref name="Krumm">PMID:23051748</ref> The conformational changes caused by this stacking allows for the signal to be moved from the extracellular binding site through the transmembrane helices of the receptor to the intracellular region activating the G protein.
== Sodium Binding Pocket ==
== Sodium Binding Pocket ==
Conserved across all class A GPCRs, a <scene name='72/727765/Gw5_na_pocket_final/4'>sodium ion-binding pocket</scene> (PDB code:[http://www.rcsb.org/pdb/explore/explore.do?structureId=4GRV 4GRV)] is seen in the middle of TM2 helix. The ion is coordinated with a highly conserved D<sup>2.50</sup> and four other contacts with oxygen atoms. Some of these oxygen atoms are sourced from water molecules. In order for G-protein activation, a <scene name='72/721539/4xee_na_binding_pocket/2'>hydrogen bond coordination</scene> (PDB Code:[http://www.rcsb.org/pdb/explore/explore.do?structureId=4XEE 4XEE]) with T<sup>3.39</sup>, S<sup>7.46</sup> ,N<sup>7.49</sup> of the NPxxY [https://en.wikipedia.org/wiki/Structural_motif motif], prevents the coordination of a Na<sup>+</sup>. <ref name="Krumm"/><ref name="Katritch">PMID:24767681</ref>
Conserved across all class A GPCRs, a <scene name='72/727765/Gw5_na_pocket_final/4'>sodium ion-binding pocket</scene> (PDB code:[http://www.rcsb.org/pdb/explore/explore.do?structureId=4GRV 4GRV)] is seen in the middle of TM2 helix. The ion is coordinated with a highly conserved D<sup>2.50</sup> and four other contacts with oxygen atoms. Some of these oxygen atoms are sourced from water molecules. In order for G-protein activation, a <scene name='72/721539/4xee_na_binding_pocket/2'>hydrogen bond coordination</scene> (PDB Code:[http://www.rcsb.org/pdb/explore/explore.do?structureId=4XEE 4XEE]) with T<sup>3.39</sup>, S<sup>7.46</sup> ,N<sup>7.49</sup> of the NPxxY [https://en.wikipedia.org/wiki/Structural_motif motif], prevents the coordination of a Na<sup>+</sup>. <ref name="Krumm"/><ref name="Katritch">PMID:24767681</ref>

Revision as of 19:12, 17 April 2016

Neurotensin Receptor (NTSR1)

Neurotensin G-Protein Coupled Receptor (PDB Codes 4GRV and 4XEE)

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References

  1. Millar RP, Newton CL. The year in G protein-coupled receptor research. Mol Endocrinol. 2010 Jan;24(1):261-74. Epub 2009 Dec 17. PMID:20019124 doi:10.1210/me.2009-0473
  2. Gui X, Carraway RE. Enhancement of jejunal absorption of conjugated bile acid by neurotensin in rats. Gastroenterology. 2001 Jan;120(1):151-60. PMID:11208724
  3. Selivonenko VG. [The interrelationship between electrolytes and phase analysis of systole in toxic goiter]. Probl Endokrinol (Mosk). 1975 Jan-Feb;21(1):19-23. PMID:1173461
  4. Fang Y, Lahiri J, Picard L. G protein-coupled receptor microarrays for drug discovery. Drug Discov Today. 2004 Dec 15;9(24 Suppl):S61-7. PMID:23573662
  5. 5.0 5.1 White JF, Noinaj N, Shibata Y, Love J, Kloss B, Xu F, Gvozdenovic-Jeremic J, Shah P, Shiloach J, Tate CG, Grisshammer R. Structure of the agonist-bound neurotensin receptor. Nature. 2012 Oct 25;490(7421):508-13. doi: 10.1038/nature11558. Epub 2012 Oct 10. PMID:23051748 doi:http://dx.doi.org/10.1038/nature11558
  6. Vincent JP, Mazella J, Kitabgi P. Neurotensin and neurotensin receptors. Trends Pharmacol Sci. 1999 Jul;20(7):302-9. PMID:10390649
  7. 7.0 7.1 7.2 White JF, Noinaj N, Shibata Y, Love J, Kloss B, Xu F, Gvozdenovic-Jeremic J, Shah P, Shiloach J, Tate CG, Grisshammer R. Structure of the agonist-bound neurotensin receptor. Nature. 2012 Oct 25;490(7421):508-13. doi: 10.1038/nature11558. Epub 2012 Oct 10. PMID:23051748 doi:http://dx.doi.org/10.1038/nature11558
  8. Katritch V, Fenalti G, Abola EE, Roth BL, Cherezov V, Stevens RC. Allosteric sodium in class A GPCR signaling. Trends Biochem Sci. 2014 May;39(5):233-44. doi: 10.1016/j.tibs.2014.03.002. Epub , 2014 Apr 21. PMID:24767681 doi:http://dx.doi.org/10.1016/j.tibs.2014.03.002
  9. Valerie NC, Casarez EV, Dasilva JO, Dunlap-Brown ME, Parsons SJ, Amorino GP, Dziegielewski J. Inhibition of neurotensin receptor 1 selectively sensitizes prostate cancer to ionizing radiation. Cancer Res. 2011 Nov 1;71(21):6817-26. doi: 10.1158/0008-5472.CAN-11-1646. Epub, 2011 Sep 8. PMID:21903767 doi:http://dx.doi.org/10.1158/0008-5472.CAN-11-1646
  10. Kisfalvi K, Eibl G, Sinnett-Smith J, Rozengurt E. Metformin disrupts crosstalk between G protein-coupled receptor and insulin receptor signaling systems and inhibits pancreatic cancer growth. Cancer Res. 2009 Aug 15;69(16):6539-45. doi: 10.1158/0008-5472.CAN-09-0418. PMID:19679549 doi:http://dx.doi.org/10.1158/0008-5472.CAN-09-0418
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