5ts0
From Proteopedia
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| <StructureSection load='5ts0' size='340' side='right'caption='[[5ts0]], [[Resolution|resolution]] 2.85Å' scene=''> | <StructureSection load='5ts0' size='340' side='right'caption='[[5ts0]], [[Resolution|resolution]] 2.85Å' scene=''> | ||
| == Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5ts0]] is a 28 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5ts0]] is a 28 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TS0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5TS0 FirstGlance]. <br> | 
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=7J1:(2S)-N-{(2S)-3-METHOXY-1-[(NAPHTHALEN-1-YLMETHYL)AMINO]-1-OXOPROPAN-2-YL}-4-OXO-2-[(3-PHENYLPROPANOYL)AMINO]-4-(1H-PYRROL-1-YL)BUTANAMIDE+(NON-PREFERRED+NAME)'>7J1</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8467975Å</td></tr> | 
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7J1:(2S)-N-{(2S)-3-METHOXY-1-[(NAPHTHALEN-1-YLMETHYL)AMINO]-1-OXOPROPAN-2-YL}-4-OXO-2-[(3-PHENYLPROPANOYL)AMINO]-4-(1H-PYRROL-1-YL)BUTANAMIDE+(NON-PREFERRED+NAME)'>7J1</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ts0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ts0 OCA], [https://pdbe.org/5ts0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ts0 RCSB], [https://www.ebi.ac.uk/pdbsum/5ts0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ts0 ProSAT]</span></td></tr> | |
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| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
| </table> | </table> | ||
| == Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/PSA_MYCTU PSA_MYCTU] Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The M.tuberculosis proteasome is able to cleave oligopeptides not only after hydrophobic but also after basic, acidic and small neutral residues. Among the identified substrates of the M.tuberculosis proteasome are the pupylated FabD, PanB and Mpa proteins. One function of the proteasome is to contribute to M.tuberculosis ability to resist killing by host macrophages, since the core proteasome is essential for persistence of the pathogen during the chronic phase of infection in mice. The mechanism of protection against bactericidal chemistries of the host's immune response probably involves the degradation of proteins that are irreversibly oxidized, nitrated, or nitrosated.<ref>PMID:16468985</ref> <ref>PMID:18059281</ref>  | 
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| ==See Also== | ==See Also== | ||
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| </StructureSection> | </StructureSection> | ||
| [[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Proteasome endopeptidase complex]] | ||
| - | [[Category: Fan, H]] | ||
| - | [[Category: Hsu, H C]] | ||
| - | [[Category: Li, H]] | ||
| - | [[Category: Lin, G]] | ||
| - | [[Category: Nathan, C]] | ||
| - | [[Category: Singh, P K]] | ||
| - | [[Category: Sukenick, G]] | ||
| - | [[Category: Wang, R]] | ||
| - | [[Category: C-capped dipeptide]] | ||
| - | [[Category: Hydronlase-hydrolase inhibitor complex]] | ||
| - | [[Category: Inhibitor]] | ||
| [[Category: Mycobacterium tuberculosis]] | [[Category: Mycobacterium tuberculosis]] | ||
| - | [[Category:  | + | [[Category: Fan H]] | 
| + | [[Category: Hsu H-C]] | ||
| + | [[Category: Li H]] | ||
| + | [[Category: Lin G]] | ||
| + | [[Category: Nathan C]] | ||
| + | [[Category: Singh PK]] | ||
| + | [[Category: Sukenick G]] | ||
| + | [[Category: Wang R]] | ||
Current revision
Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide PKS2208
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Categories: Large Structures | Mycobacterium tuberculosis | Fan H | Hsu H-C | Li H | Lin G | Nathan C | Singh PK | Sukenick G | Wang R
