Molecular visualization in the 1980s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 14: Line 14:
A few years after that, as a post-doc, I had the privilege of being given an RK07 disk cartridge which cost the department the best part of £1000 and allowed me to store almost 30 MB of my own data, rather than begging, borrowing or stealing space on other peoples' disks. These cartridges had to be placed very carefully in one of the PDP-11 disk drives, each of which was about the size of a domestic washing machine, if not larger. The computer alone cost several times the average UK house price, as did the PS2. Although the technology was brand new in its day, these costs do seem rather excessive for a box or two of electronics. I am sure that part of the profit model was to make these machines significantly, but not massively, cheaper than employing the legions of accountants and draftsmen which they would come to replace in the commercial sector.
A few years after that, as a post-doc, I had the privilege of being given an RK07 disk cartridge which cost the department the best part of £1000 and allowed me to store almost 30 MB of my own data, rather than begging, borrowing or stealing space on other peoples' disks. These cartridges had to be placed very carefully in one of the PDP-11 disk drives, each of which was about the size of a domestic washing machine, if not larger. The computer alone cost several times the average UK house price, as did the PS2. Although the technology was brand new in its day, these costs do seem rather excessive for a box or two of electronics. I am sure that part of the profit model was to make these machines significantly, but not massively, cheaper than employing the legions of accountants and draftsmen which they would come to replace in the commercial sector.
 +
 +
<table class="wikitable" align="right"><tr><td>
 +
This photo and most of the following explanation were very kindly provided by Prof Thomas Ferrin, Pharmaceutical Chemistry, University of California, San Francisco, showing their system in about 1980. The black cylindrical objects with domed ends are stereo viewers originally made by Bausch and Lomb. They were rotating cylinders that you looked through. They occlude one eye at a time from seeing the screen and their rotation is synchronized with computed left and right eye images. Before the invention of dynamic polarizing lens they were one of the few ways to see stereo images on a calligraphic display.
 +
 +
E&S also marketed a stereo viewer they called the lorgnette. It was based on a rotating disk instead of a rotating cylinder, but otherwise worked in a similar fashion. This photo is the only one showing the E&S mouse (top of the right-hand screen) with which most of the molecular graphics rebuilding work was done.
 +
</td></tr><tr><td width="500">
 +
[[Image:Cooper-jon-ps2_ucsf.jpg|500px]]
 +
</td></tr></table>

Revision as of 19:39, 2 December 2024

The following article was written by Jonathan Cooper, Professor Emeritus at University College, London. (Eric Martz simply put it into Proteopedia, but had no authorship role.)

An Evans and Sutherland Picture System 2 (PS2) equipped with a light-pen and dial box. The back of the PDP-11/60 computer cabinet can be seen on the far right. Colour graphic terminals were also available. This photograph is reproduced with the permission of the Museum Waalsdorp, The Hague, Netherlands.

Another E&S photograph courtesy of the Museum Waalsdorp, dated 1977.

My first encounter with computer graphics being used in a protein crystallography laboratory was in 1984 when a class I was in was shown an Evans and Sutherland (E&S) Picture System 2, or PS2 for short. The display was black-and-white but still it was quite impressive and was one of the things that led me to go into the field as a PhD student. Thus, a year later I had the opportunity to use a colour E&S system, which was appreciably better, for my own research project. It was controlled by a PDP-11/60 which had 128k of RAM while the PS2 itself had 64k of RAM (Taylor, 1982).

A few years after that, as a post-doc, I had the privilege of being given an RK07 disk cartridge which cost the department the best part of £1000 and allowed me to store almost 30 MB of my own data, rather than begging, borrowing or stealing space on other peoples' disks. These cartridges had to be placed very carefully in one of the PDP-11 disk drives, each of which was about the size of a domestic washing machine, if not larger. The computer alone cost several times the average UK house price, as did the PS2. Although the technology was brand new in its day, these costs do seem rather excessive for a box or two of electronics. I am sure that part of the profit model was to make these machines significantly, but not massively, cheaper than employing the legions of accountants and draftsmen which they would come to replace in the commercial sector.

This photo and most of the following explanation were very kindly provided by Prof Thomas Ferrin, Pharmaceutical Chemistry, University of California, San Francisco, showing their system in about 1980. The black cylindrical objects with domed ends are stereo viewers originally made by Bausch and Lomb. They were rotating cylinders that you looked through. They occlude one eye at a time from seeing the screen and their rotation is synchronized with computed left and right eye images. Before the invention of dynamic polarizing lens they were one of the few ways to see stereo images on a calligraphic display.

E&S also marketed a stereo viewer they called the lorgnette. It was based on a rotating disk instead of a rotating cylinder, but otherwise worked in a similar fashion. This photo is the only one showing the E&S mouse (top of the right-hand screen) with which most of the molecular graphics rebuilding work was done.

Proteopedia Page Contributors and Editors (what is this?)

Eric Martz, Angel Herraez

Personal tools