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User:Eric Martz
From Proteopedia
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===Principal Author or Architect of (Elsewhere):=== | ===Principal Author or Architect of (Elsewhere):=== | ||
| - | * [http://firstglance.jmol.org FirstGlance in Jmol], a general-purpose molecular visualization tool which has been adopted by [http://www.nature.com/nature ''Nature''] (see the ''3D View'' links), [http://consurf.tau.ac.il the ConSurf Server], and [http://firstglance.jmol.org/adoption.htm other journals and structural bioinformatics servers]. 2005-present. | + | * [http://firstglance.jmol.org FirstGlance in Jmol], a general-purpose molecular visualization tool which has been adopted by [http://www.nature.com/nature ''Nature''] (see the ''3D View'' links), [http://consurf.tau.ac.il the ConSurf Server], and [http://firstglance.jmol.org/adoption.htm other journals and structural bioinformatics servers]. Available 2005-present. |
| - | * Visualization for the [http://consurf.tau.ac.il the ConSurf Server] developed by Nir Ben-Tal, Fabian Glaser, Elana Erez and others, which colors amino acids by evolutionary conservation, completely automatically. 2002-present. | + | * Visualization for the [http://consurf.tau.ac.il the ConSurf Server] developed by Nir Ben-Tal, Fabian Glaser, Elana Erez and others, which colors amino acids by evolutionary conservation, completely automatically. Available 2002-present. |
* [http://top5.molviz.org Top Five 3D Molecular Visualization Technologies for the Rest Of Us]. | * [http://top5.molviz.org Top Five 3D Molecular Visualization Technologies for the Rest Of Us]. | ||
* [http://molviz.org MolviZ.Org] with tutorials in Jmol and molecular visualization resources for educators and students. Included is a [http://dna.molviz.org DNA Structure Tutorial] started in 1996, and now (in collaboration with [http://biomodel.uah.es/personal/inicio.htm Angel Herráez]) available in 5 languages. | * [http://molviz.org MolviZ.Org] with tutorials in Jmol and molecular visualization resources for educators and students. Included is a [http://dna.molviz.org DNA Structure Tutorial] started in 1996, and now (in collaboration with [http://biomodel.uah.es/personal/inicio.htm Angel Herráez]) available in 5 languages. | ||
| - | * [http://molvisindex.org World Index of Molecular Visualization Resources]. 2000-present. | + | * [http://molvisindex.org World Index of Molecular Visualization Resources]. Available 2000-present. |
| - | * [http://atlas.proteinexplorer.org Atlas of Macromolecules]. 2002-present. | + | * [http://atlas.proteinexplorer.org Atlas of Macromolecules]. Available 2002-present. |
| - | * With [http://bip.weizmann.ac.il/staff/jaime_prilusky.html Jaime Prilusky], the [http://pdblite.org PDB Lite] search interface for students and beginners to find published macromolecular models. 1998-present. | + | * With [http://bip.weizmann.ac.il/staff/jaime_prilusky.html Jaime Prilusky], the [http://pdblite.org PDB Lite] search interface for students and beginners to find published macromolecular models. Available 1998-present. |
| - | * An incomplete [http://history.molviz.org History of Macromolecular Visualization] which includes a list of the earliest macromolecules solved by X-ray crystallography. 1997-present. | + | * An incomplete [http://history.molviz.org History of Macromolecular Visualization] which includes a list of the earliest macromolecules solved by X-ray crystallography. Available 1997-present. |
* [http://www.bioinformatics.org/mailman/listinfo/molvis-list molvis-list], founded in 1995 as the ''RasMol List''. Maintained largely by [http://molvisions.com Tim Driscoll/molvisions.com] since 2004. | * [http://www.bioinformatics.org/mailman/listinfo/molvis-list molvis-list], founded in 1995 as the ''RasMol List''. Maintained largely by [http://molvisions.com Tim Driscoll/molvisions.com] since 2004. | ||
Revision as of 17:41, 24 June 2008
Contents |
Eric Martz
Professor Emeritus, University of Massachusetts, Amherst MA USA
emartz at microbio dot umass dot edu
martz.molviz.org
Some Proteopedia Pages to Which I've Contributed
Topic Pages - Molecules
- Major Histocompatibility Complex Class I
- Proton Channels, which includes an animated morph.
- Recoverin, a calcium-activated myristoyl switch
- User:Eric Martz/Nucleosomes (a protected page for lectures), which was copied into Nucleosomes so others can improve it.
PDB Code Pages
- 2ic8 (green links in overview)
- 2rd0 Phosphatidylinositol kinase oncogene: I authored scenes similar to many of the figures from the publication.
Topic Pages - Structural Bioinformatics
- Amino Acids
- Atomic coordinate file
- Biological Unit
- Conservation, Evolutionary
- Eric Martz's Favorites
- Highest impact structures of all time.
- Protein Data Bank
- Morphs NEEDS WORK
- Personal favorites
- Sites, Functional
- Standard Residues and Non-Standard Residues
Meta Pages
- Help:Copying FirstGlance Scenes into Proteopedia
- Help:Editing
- Help:Protected Pages
- Proteopedia:About
- Proteopedia:Namespaces
- Proteopedia:Policy
- Proteopedia:Problems
- Proteopedia:Topic Pages
- Proteopedia:Wishlist
Workshops
- One-day courses in molecular visualization and structural bioinformatics for researchers and educators.
Principal Author or Architect of (Elsewhere):
- FirstGlance in Jmol, a general-purpose molecular visualization tool which has been adopted by Nature (see the 3D View links), the ConSurf Server, and other journals and structural bioinformatics servers. Available 2005-present.
- Visualization for the the ConSurf Server developed by Nir Ben-Tal, Fabian Glaser, Elana Erez and others, which colors amino acids by evolutionary conservation, completely automatically. Available 2002-present.
- Top Five 3D Molecular Visualization Technologies for the Rest Of Us.
- MolviZ.Org with tutorials in Jmol and molecular visualization resources for educators and students. Included is a DNA Structure Tutorial started in 1996, and now (in collaboration with Angel Herráez) available in 5 languages.
- World Index of Molecular Visualization Resources. Available 2000-present.
- Atlas of Macromolecules. Available 2002-present.
- With Jaime Prilusky, the PDB Lite search interface for students and beginners to find published macromolecular models. Available 1998-present.
- An incomplete History of Macromolecular Visualization which includes a list of the earliest macromolecules solved by X-ray crystallography. Available 1997-present.
- molvis-list, founded in 1995 as the RasMol List. Maintained largely by Tim Driscoll/molvisions.com since 2004.
And in an earlier era
- Protein Explorer 1998-present.
- The RasMol Home Page founded 1996.
