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User:Eric Martz
From Proteopedia
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* [http://workshops.molviz.org One-day courses] in molecular visualization and structural bioinformatics for researchers and educators. | * [http://workshops.molviz.org One-day courses] in molecular visualization and structural bioinformatics for researchers and educators. | ||
| - | + | ==Principal Author or Architect of (Elsewhere):== | |
* [http://firstglance.jmol.org FirstGlance in Jmol], a general-purpose molecular visualization tool which has been adopted by [http://www.nature.com/nature ''Nature''] (see the ''3D View'' links), [http://consurf.tau.ac.il the ConSurf Server], and [http://firstglance.jmol.org/adoption.htm other journals and structural bioinformatics servers]. Available 2005-present. | * [http://firstglance.jmol.org FirstGlance in Jmol], a general-purpose molecular visualization tool which has been adopted by [http://www.nature.com/nature ''Nature''] (see the ''3D View'' links), [http://consurf.tau.ac.il the ConSurf Server], and [http://firstglance.jmol.org/adoption.htm other journals and structural bioinformatics servers]. Available 2005-present. | ||
* Visualization for the [http://consurf.tau.ac.il the ConSurf Server] developed by Nir Ben-Tal, Fabian Glaser, Elana Erez and others, which colors amino acids by evolutionary conservation, completely automatically. Available 2002-present. | * Visualization for the [http://consurf.tau.ac.il the ConSurf Server] developed by Nir Ben-Tal, Fabian Glaser, Elana Erez and others, which colors amino acids by evolutionary conservation, completely automatically. Available 2002-present. | ||
Revision as of 19:13, 25 June 2008
Contents |
Eric Martz
Professor Emeritus, University of Massachusetts, Amherst MA USA
emartz at microbio dot umass dot edu
martz.molviz.org
Some Proteopedia Pages to Which I've Contributed
Topic Pages - Molecules
- Major Histocompatibility Complex Class I
- Proton Channels, which includes an animated morph.
- Recoverin, a calcium-activated myristoyl switch
- User:Eric Martz/Nucleosomes (a protected page for lectures), which was copied into Nucleosomes so others can improve it.
PDB Code Pages
- 2ic8 (green links in overview)
- 2rd0 Phosphatidylinositol kinase oncogene: I authored scenes similar to many of the figures from the publication.
Topic Pages - Structural Bioinformatics
- About Macromolecular Structure
- Amino Acids
- Asymmetric Unit UNIT CELL SCENE NOT WORKING
- Atomic coordinate file
- Biological Unit
- Conservation, Evolutionary
- Eric Martz's Favorites
- Highest impact structures of all time.
- Protein Data Bank
- Ligand
- Morphs NEEDS WORK
- Personal favorites
- Sites, Functional
- Standard Residues and Non-Standard Residues
Meta Pages
- Help:Copying FirstGlance Scenes into Proteopedia
- Help:Editing
- Help:Protected Pages
- Proteopedia:About
- Proteopedia:Namespaces
- Proteopedia:Policy
- Proteopedia:Problems
- Proteopedia:Topic Pages
- Proteopedia:Wishlist
Workshops
- One-day courses in molecular visualization and structural bioinformatics for researchers and educators.
Principal Author or Architect of (Elsewhere):
- FirstGlance in Jmol, a general-purpose molecular visualization tool which has been adopted by Nature (see the 3D View links), the ConSurf Server, and other journals and structural bioinformatics servers. Available 2005-present.
- Visualization for the the ConSurf Server developed by Nir Ben-Tal, Fabian Glaser, Elana Erez and others, which colors amino acids by evolutionary conservation, completely automatically. Available 2002-present.
- Top Five 3D Molecular Visualization Technologies for the Rest Of Us. Page available 2007-present.
- MolviZ.Org with tutorials in Jmol and molecular visualization resources for educators and students. Included is a DNA Structure Tutorial started in 1996, and now (in collaboration with Angel Herráez) available in 5 languages.
- World Index of Molecular Visualization Resources. Available 2000-present.
- Atlas of Macromolecules. Available 2002-present.
- With Jaime Prilusky, the PDB Lite search interface for students and beginners to find published macromolecular models. Available 1998-present.
- An incomplete History of Macromolecular Visualization which includes a list of the earliest macromolecules solved by X-ray crystallography. Available 1997-present.
- molvis-list, founded in 1995 as the RasMol List. Maintained largely by Tim Driscoll/molvisions.com since 2004.
And in an earlier era
- Protein Explorer 1998-present.
- The RasMol Home Page founded 1996. See also RasMol.Org by Herbert Bernstein, available since 1999.
