User:Wayne Decatur

From Proteopedia

Revision as of 00:14, 21 December 2009

Wayne Decatur

Research Associate in the Department of Biochemistry and Molecular Biology at the University of Massachusetts at Amherst.

Interests:
small RNAs and their associated ribonucleoprotein complexes; the Ribosome; RNA modification; catalytic RNAs; homing endonucleases.

Wayne's site on the web

Wayne's publications listed at the the U.S. National Library of Medicine's PubMed database

email:

Some Proteopedia Pages to Which I've Contributed

Molecules: Topic Pages

• The Ribosome
• Large Ribosomal Subunit of Haloarcula marismortui
• Suppression of RNA Silencing by Viruses
• Plant Viral Protein p19 Suppression of RNA Silencing
• Tomato aspermy virus protein 2b Suppression of RNA Silencing
• Flock house virus B2 protein Suppression of RNA Silencing
• Green Fluorescent Protein
• DEAD-box helicase protein Vasa
• Swi2/Snf2 protein RapA
• Mfd (TRCF, transcription-repair coupling factor)
• UvrA-UvrB interaction domains complex
• DExD/H-box RNA-dependent ATPase DDX19 in the open and closed cleft conformation
• C-terminal domain of the DExD/H-box RNA-dependent ATPase Dbp5
• RecG in complex with a synthetic three-way DNA junction resembling a stalled replication fork

Topic Pages - Structural Bioinformatics

• About Macromolecular Structure
• Cation-pi interactions
• Getting Unremediated PDB Files
• Net charge
• Isoelectric point
• Standard Residues and Non-Standard Residues

Meta Pages

• Help:Editing

Workshops

• Proteopedia Work Session for Chem 791A-Biomolecular Structure
• Biochem642 Molecular Visualization Sessions Fall 2009

Personal Quicklinks

All Protected Pages

• Search for User:Wayne Decatur in User Namespace

Files Uploaded

• Files Uploaded by Wayne Decatur

Sandboxes

• Sandbox1rpu working out configuration&isosurfaces&dots problems
• Sandbox2hvy test for dots in another file

Protected Sandbox Pages

• My Protected Sandbox Pages

Protected Topic Pages

• Wayne_Decatur/Haloarcula Large Ribosomal Subunit
• User:Wayne Decatur/Interactions between Antibiotics and the Ribosome
• User:Wayne Decatur/Suppression of RNA Silencing by Viruses
• User:Wayne Decatur/Plant Viral Protein p19 Suppression of RNA Silencing
• User:Wayne Decatur/Tomato aspermy virus protein 2b Suppression of RNA Silencing
• User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing
• User:Wayne Decatur/Teaching Proteopedia
• User:Wayne Decatur/Editing Getting Unremediated PDB Files
• User:Wayne Decatur/Moving Components or Parts of Structures
• User:Wayne Decatur/Generate Unfolded Structures
• User:Wayne Decatur/Alter Disulfide Bonds in a Structure
• User:Wayne Decatur/Homology Modeling
• User:Wayne Decatur/Sequence analysis tools
• User:Wayne Decatur/I-Ppo Morph Methods
• User:Wayne Decatur/3fpn Morph methods
• User:Wayne Decatur/3ewsSLASH3g0h Morph methods

Templates

• My Templates

Help

• Proteopedia:Problems
• Jmol Command Reference Manual for advanced scene authoring.
• Jmol Wiki

Wikitext help

• URLS in external links has the codes for using characters that aren't A-Z a-z 0-9 ._\/~%-+&#?!=()@ in links
• Guide to Wikitext Markup Language (wiki code)
• How to edit illustrates use of nowiki and pre tags.
• Wikitext quick cheat sheet also has how to make link to categories, too
• Categories can be linked to with colon in front
• WikiTable Markup Guide
• Images: linking to articles using wikitext