Group:SMART:2010 Pingry SMART Team Models

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	'''Return to 2010 SMART Team Page:''' [[2010 Pingry SMART Team]]		'''Return to 2010 SMART Team Page:''' [[2010 Pingry SMART Team]]
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		+	'''General design guidelines'''
	Helix color (blue): [128,255,255]		Helix color (blue): [128,255,255]

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Revision as of 02:36, 8 March 2010

Return to 2010 SMART Team Page: 2010 Pingry SMART Team

General design guidelines

Helix color (blue): [128,255,255]

Sheet color (red): [255,128,128]

Contents 1 AdhD K249G/H255R double mutant and Self-assembly into hydrogels 2 PDB ID: 1a80, 2,5-diketo-d-gluconic acid reductase with NADPH (wild-type) 3 PDB ID: 1m9h, Mutant 2,5-diketo-d-gluconic acid reductase with NADH (mutant) 4 PDB ID: 1k8c, Xylose reductase with NADP+ 5 PDB ID: 1mi3, Xylose reductase with NAD+ 6 PDB ID: 1lwi, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with NADP+ cofactor 7 PDB ID: 1afs, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with cofactor and testosterone

AdhD K249G/H255R double mutant and Self-assembly into hydrogels

spinqualitylabelsall models AdhD K249G/H255R double mutant Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

Design script:

Select all

Backbone off

Wireframe off

Spacefill off

Cartoon off

Backbone 300

Color white

Select (253-260) or (230-241) or (190-198) or (157-165) or (131-144) or (98-112) or (68-78) or (40-53)

Color [128,255,255]

Select (118-122) or (149-153) or (174-177) or (201-205) or (244-249) or (22-25) or (57-61) or (86-91)

Color [255,128,128]

Select 249 and (sidechain or alpha)

Wireframe 250

Select 249 and sidechain

Color cpk

Select 249 and alpha

Color [0,0,255]

Select 255 and (sidechain or alpha)

Wireframe 250

Select 255 and sidechain

Color cpk

Select 255 and alpha

Color [0,0,255]

PDB ID: 1a80, 2,5-diketo-d-gluconic acid reductase with NADPH (wild-type)

spinqualitylabelsall models 1a80, 2,5-diketo-d-gluconic acid reductase with NADPH (wild-type) Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

PDB ID: 1m9h, Mutant 2,5-diketo-d-gluconic acid reductase with NADH (mutant)

spinqualitylabelsall models 1m9h, Mutant 2,5-diketo-d-gluconic acid reductase with NADH Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

PDB ID: 1k8c, Xylose reductase with NADP+

spinqualitylabelsall models 1k8c, Xylose reductase with NADP+ Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

PDB ID: 1mi3, Xylose reductase with NAD+

spinqualitylabelsall models 1mi3, Xylose reductase with NAD+ Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

PDB ID: 1lwi, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with NADP+ cofactor

spinqualitylabelsall models 1lwi, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with NADP+ cofactor Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

PDB ID: 1afs, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with cofactor and testosterone

spinqualitylabelsall models 1afs, Rat liver 3-alpha-hydroxysteroid dihydrodiol dehydrogenase with cofactor and testosterone Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image