This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
User:Wayne Decatur
From Proteopedia
m (→Workshops) |
m (→Workshops) |
||
| Line 70: | Line 70: | ||
==Workshops== | ==Workshops== | ||
*[[User:Wayne Decatur/Chem791A Work Session|Proteopedia Work Session for Chem 791A-Biomolecular Structure]] | *[[User:Wayne Decatur/Chem791A Work Session|Proteopedia Work Session for Chem 791A-Biomolecular Structure]] | ||
| - | *[[User:Wayne Decatur/Biochem642 Molecular Visualization 2010 Fall Sessions] | + | *[[User:Wayne Decatur/Biochem642 Molecular Visualization 2010 Fall Sessions]] |
==Personal Quicklinks== | ==Personal Quicklinks== | ||
Revision as of 16:50, 22 October 2010
Contents |
Wayne Decatur
Research Associate in the Department of Biochemistry and Molecular Biology at the University of Massachusetts at Amherst.
Member of the Proteopedia Editorial Board.
Interests:
small RNAs and their associated ribonucleoprotein complexes; the Ribosome; RNA modification; catalytic RNAs; homing endonucleases.
Wayne's publications listed at the the U.S. National Library of Medicine's PubMed database
Some Proteopedia Pages to Which I've Contributed
Molecules: Topic Pages
- The Ribosome
- Large Ribosomal Subunit of Haloarcula marismortui
- Interactions between Antibiotics and the Ribosome
- Azithromycin bound to the Large Ribosomal Subunit of Haloarcula marismortui
- Suppression of RNA Silencing by Viruses
- Plant Viral Protein p19 Suppression of RNA Silencing
- Tomato aspermy virus protein 2b Suppression of RNA Silencing
- Flock house virus B2 protein Suppression of RNA Silencing
- Green Fluorescent Protein
- DEAD-box helicase protein Vasa
- Swi2/Snf2 protein RapA
- Mfd (TRCF, transcription-repair coupling factor)
- UvrA-UvrB interaction domains complex
- DExD/H-box RNA-dependent ATPase DDX19 in the open and closed cleft conformation
- C-terminal domain of the DExD/H-box RNA-dependent ATPase Dbp5
- RecG in complex with a synthetic three-way DNA junction resembling a stalled replication fork
- Escherichia coli LepA, the ribosomal back translocase
- The Pore Forming Toxin, α-hemolsyin
- CED-4 Apoptosome
- The Glutamate Receptor (GluA2)
- Luciferase
Topic Pages - Structural Bioinformatics
- About Macromolecular Structure
- Cation-pi interactions
- Getting Unremediated PDB Files
- Net charge
- Isoelectric point
- Standard Residues and Non-Standard Residues
Topic Pages - Education
- Teaching Strategies Using Proteopedia
- Teaching Scenes, Tutorials, and Educators' Pages
- High school teachers' resources
Meta Pages
- Help:Editing
- Proteopedia:About
- Proteopedia:Policy
- Proteopedia:Facebook
- Proteopedia:Twitter
- Jmol
- DRuMS
- Wanted pages
- Pages needing expansion
- Pages needing improvement
Workshops
- Proteopedia Work Session for Chem 791A-Biomolecular Structure
- User:Wayne Decatur/Biochem642 Molecular Visualization 2010 Fall Sessions
Personal Quicklinks
All Protected Pages
Files Uploaded
Sandboxes
- Sandbox1rpu working out configuration&isosurfaces&dots problems
- Sandbox2hvy test for dots in another file
Protected Sandbox Pages
Protected Topic Pages
- User:Wayne_Decatur/Haloarcula Large Ribosomal Subunit
- User:Wayne_Decatur/Haloarcula Large Ribosomal Subunit With Azithromycin
- User:Wayne Decatur/Interactions between Antibiotics and the Ribosome
- User:Wayne Decatur/Suppression of RNA Silencing by Viruses
- User:Wayne Decatur/Plant Viral Protein p19 Suppression of RNA Silencing
- User:Wayne Decatur/Tomato aspermy virus protein 2b Suppression of RNA Silencing
- User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing
- User:Wayne_Decatur/kink-turn motif
- User:Wayne Decatur/Teaching Proteopedia
- User:Wayne Decatur/Editing Getting Unremediated PDB Files
- User:Wayne Decatur/Moving Components or Parts of Structures
- User:Wayne Decatur/Generate Unfolded Structures
- User:Wayne Decatur/Alter Disulfide Bonds in a Structure
- User:Wayne Decatur/Homology Modeling
- User:Wayne Decatur/Sequence analysis tools
- User:Wayne Decatur/Molecular modeling tools
- User:Wayne Decatur/I-Ppo Morph Methods
- User:Wayne Decatur/3kg2 Morph Methods
- User:Wayne Decatur/3fpn Morph methods
- User:Wayne Decatur/3ewsSLASH3g0h Morph methods
- User:Wayne Decatur/humanaGal3hg2toothers morph methods
Templates
Help
- Proteopedia:Problems
- Jmol Command Reference Manual for advanced scene authoring.
- Jmol Wiki
- Jena3D Viewer
Wikitext help
- URLS in external links has the codes for using characters that aren't A-Z a-z 0-9 ._\/~%-+&#?!=()@ in links
- Guide to Wikitext Markup Language (wiki code)
- How to edit illustrates use of nowiki and pre tags.
- Wikitext quick cheat sheet also has how to make link to categories, too
- Categories can be linked to with colon in front
- HTML in wikitext
- WikiTable Markup Guide
- Images: linking to articles using wikitext
