Sandbox Reserved 500
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- | The structure of the p53 protein is pretty interesting. This protein has a single polypeptide chain divided into three discrete domains, which show a structure that has facilitated study in the absence of the rest of the protein. These domains have been found to be a concern with tetramerization, transcriptional activation, and DNA binding. In the p53 protein a N-terminal transactivation domain extends from residues 1-99 and is followed by the central core region, the largest domain, which contains residues 100-300 that bind specific DNA sequences. The third region of this protein is the C-terminal domain from residues 301-393, which includes a regulatory region and a tetramerization domain. This is the <scene name='Sandbox_Reserved_500/Active_site/2'>active site</scene>. These are the main three domains described for this protein, it has been disputed that there are four domains instead of three. Discrete domains are linked by flexible linkers creating a molecule with dynamic conformation. The p53 protein has been found to be difficult to crystallize when in the form of its full length. The p53 protein is a β sandwich formed by the interaction of antiparallel four and five stranded elements of the β sheet. | + | The structure of the p53 protein is pretty interesting. This protein has a single polypeptide chain divided into three discrete domains, which show a structure that has facilitated study in the absence of the rest of the protein. These domains have been found to be a concern with tetramerization, transcriptional activation, and DNA binding. In the p53 protein a N-terminal transactivation domain extends from residues 1-99 and is followed by the central core region, the largest domain, which contains residues 100-300 that bind specific DNA sequences. The third region of this protein is the C-terminal domain from residues 301-393, which includes a regulatory region and a tetramerization domain. This is the <scene name='Sandbox_Reserved_500/Active_site/2'>active site</scene>. There are three particular parts of the active site, starting with the <scene name='Sandbox_Reserved_500/Ac1-2/1'>first active site</scene> which is bound to at least four water molecules but then also contains the leucine, glutamine, and glycine amino acids. The <scene name='Sandbox_Reserved_500/Ac2-1/2'>second active site</scene> consists of the lysine, leucine, arginine, glutamine, tyrosine, and tryptophan amino acids. These are the main three domains described for this protein, it has been disputed that there are four domains instead of three. Discrete domains are linked by flexible linkers creating a molecule with dynamic conformation. The p53 protein has been found to be difficult to crystallize when in the form of its full length. The p53 protein is a β sandwich formed by the interaction of antiparallel four and five stranded elements of the β sheet. |
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Revision as of 23:20, 1 May 2012
This Sandbox is Reserved from 13/03/2012, through 01/06/2012 for use in the course "Proteins and Molecular Mechanisms" taught by Robert B. Rose at the North Carolina State University, Raleigh, NC USA. This reservation includes Sandbox Reserved 451 through Sandbox Reserved 500. | |||||||
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P53 ProteinIntroductionCancer is one of the most popular diseases occurring today. Research has been done on this issue for an extended amount of years to figure out how this devastating case works and what factors are contributing to this devastating illness. Throughout time there have been some successful answers while some things still remain in question during this existent investigation. One of the most interesting roles in the fight with cancer happens to be a protein quite phenomenal to cell life. This protein is none other than the unique p53 protein. P53 protein is an extremely important system in cell cycle control and the area of cancer. This protein was researched by Bert Vogelstein, David Lane, and Arnold Levine. The p53 protein is also called the guardian of the genome because of the role it has in checkpoint pathways of the cell cycle. This protein is located on chromosome 17 on the short arm which is where the open reading frames occur for proteins. The p53 protein was discovered through co-purification with a large T antigen in SV40 virus transformed cells.
StructureThe structure of the p53 protein is pretty interesting. This protein has a single polypeptide chain divided into three discrete domains, which show a structure that has facilitated study in the absence of the rest of the protein. These domains have been found to be a concern with tetramerization, transcriptional activation, and DNA binding. In the p53 protein a N-terminal transactivation domain extends from residues 1-99 and is followed by the central core region, the largest domain, which contains residues 100-300 that bind specific DNA sequences. The third region of this protein is the C-terminal domain from residues 301-393, which includes a regulatory region and a tetramerization domain. This is the . There are three particular parts of the active site, starting with the which is bound to at least four water molecules but then also contains the leucine, glutamine, and glycine amino acids. The consists of the lysine, leucine, arginine, glutamine, tyrosine, and tryptophan amino acids. These are the main three domains described for this protein, it has been disputed that there are four domains instead of three. Discrete domains are linked by flexible linkers creating a molecule with dynamic conformation. The p53 protein has been found to be difficult to crystallize when in the form of its full length. The p53 protein is a β sandwich formed by the interaction of antiparallel four and five stranded elements of the β sheet.
FunctionThe p53 protein is a tumor suppressor gene that stops the formation of tumors, particularly tumors that can lead to cancer. In order for the p53 protein to work it has to be phosphorylated. When DNA has double-stranded breaks, its altered form triggers the activation of the ataxia telangiectasia mutated (ATM) protein kinase. The ATM enzyme catalyzes the phosphorylation of checkpoint kinases within the cycle, which as a result phosphorylate the p53 protein. Phosphorylating the p53 protein in this manner helps protect it from degradation allowing it to buildup in the presence of damaged deoxyribonucleic acid (DNA). Now that p53 is available it can carry out its task in the cell cycle. |