Sandbox 31

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residues within <scene name='Sandbox_31/Ak_ligand_binding/3'>3 angstroms</scene> of the ligand are involved in binding the ligand or stabilizing the active site.
residues within <scene name='Sandbox_31/Ak_ligand_binding/3'>3 angstroms</scene> of the ligand are involved in binding the ligand or stabilizing the active site.
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adenylate kinase's <scene name='Sandbox_31/Ak_active_site/1'>active site</scene> is highlighted in dark blue.

Revision as of 18:06, 7 August 2012

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Please do NOT make changes to this Sandbox. Sandboxes 30-60 are reserved for use by Biochemistry 410 & 412 at Messiah College taught by Dr. Hannah Tims during Fall 2012 and Spring 2013.


Contents

Adenylate Kinase (PDB ID #: 1ake)

adenylate kinase bound to non-hydrolyzable substrate analogue

Drag the structure with the mouse to rotate


Introduction

is a good little protein.


Physical Properties

Adenylate kinase is caged with .

Structure

The of adenylate kinase shows alpha helicies (cyan) and beta sheets (green) surrounding the non-hydrolyzable substrate analogue (orange). Adenylate kinase has a exterior, and a core, with additional on the interior contacting the ligand.

Active Site and Mechanism

residues within of the ligand are involved in binding the ligand or stabilizing the active site.

adenylate kinase's is highlighted in dark blue.


References

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