Highlighted Proteins of Lyme Disease

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[[Image: Cataly.png|300px|right|thumb|<b>Figure 6: Comparison of the Compositions of the OspB and a Serine Protease Catalytic Triads</b>]]
[[Image: Cataly.png|300px|right|thumb|<b>Figure 6: Comparison of the Compositions of the OspB and a Serine Protease Catalytic Triads</b>]]
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The mechanism by which CB2 and H6831 Fab fragments destroy a spirochete appears to be a novel interaction. It is possible that Fab binding changes the properties of OspB folding, which may increase sensitivity of the protein to proteolysis or aggregation. NMR methods have shown that the effects of binding can be sent to regions of the antigen distant from the epitope, which is at the <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_rainbow/1'>C-terminus</scene> shown in red (N-terminus in blue). OspB shows signs of truncation after interacting with Fab of H6831 <ref>PMID: 1382591</ref>. Truncated OspBs cease within the two C-terminal beta-strands of the central sheet. H6831 disorders or removes a beta sheet from OspB after binding, and cleavage may be a possible explanation for the conformational changes of OspB.<ref>PMID: 7505260</ref>
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The mechanism by which CB2 and H6831 Fab fragments destroy a spirochete appears to be a novel interaction. It is possible that Fab binding changes the properties of OspB folding, which may increase sensitivity of the protein to proteolysis or aggregation. NMR methods have shown that the effects of binding can be sent to regions of the antigen distant from the epitope, which is at the <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_rainbow/1'>C-terminus</scene> shown in red (N-terminus in blue). OspB shows signs of truncation after interacting with Fab of H6831 <ref>PMID: 1382591</ref>. Truncated OspBs cease within the two C-terminal beta-strands of the central sheet. H6831 disorders or removes a beta sheet from OspB after binding, and cleavage may be a possible explanation for the conformational changes of OspB.<ref>PMID: 7505260</ref> In <b>H6831-free</b> and <b>H6831-bound</b> forms of OspB, some changes result from proteolysis near the N-terminus.<sup>[15]</sup> Residues 157-201 on OspB contain the <b>cleaved region</b>, shown in pink.<ref>PMID: 15713683</ref>
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It is possible that OspB performs an autoproteolysis. There is a <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_cat_triad_cool/9'>set of three residues</scene> found on OspB that resembles the catalytic triad of [[Serine_Proteases]]. This "constellation" consists of Thr-166, Arg-162, and Glu-184, which is similar to the catalytic triad residues of the serine protease [[trypsin]], which are Ser-195, His-57, Asp-102 <ref> PMID:12475199</ref>.
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It is quite possible that OspB performs an autoproteolysis. There is a set of <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_cat_triad_cool/9'>three residues</scene> found on OspB that resembles the catalytic triad of [http://proteopedia.org/wiki/index.php/Serine_Proteases serine proteases]. This "constellation" consists of Thr166, Arg162, and Glu184 - similar to the catalytic triad residues of the serine protease [[trypsin]], which are Ser195, His57, and Asp102.<ref> PMID:12475199</ref> Threonine and Glutamic acid are found in other catalytic triads of the serine hydrolase family, but arginine seems unlikely to replace histidine as a base due to its higher pKa. There have been studies that have shown that arginine is essential for other enzymatic functions, such as in the Ser-Arg-Asp catalytic triad in cytosolic phospholipase A2 and as a catalytic base in Sortase A. <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_asn164/1'>Asn164</scene> forms an hydrogen bond with <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_asn164/2'>Thr166</scene> and may rearrange to form a putative oxyanion hole with Thr166 and another unidentified atom if active in the catalysis. A concerted proton transfer, similar to a “proton wire”, is one plausible mechanism that would allow arginine to function in the catalytic triad of a protease.
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Threonine and Glutamic acid are found in other catalytic triads of the serine hydrolase family, but argenine seems unlikely to replace histidine as a base because of its higher pKa. There have been studies that have shown that Argenine is essential for other enzymatic functions, such as in the Ser-Arg-Asp triad in cytosolic phospholipase A2 and as a catalytic base in Sortase A. <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_asn164/1'>Asn-164</scene> forms an H-bond with <scene name='User:Olivia_Cheng/Sandbox_1/1p4p_asn164/2'>Thr-166</scene> and may rearrange to form a putative oxyanion hole with Thr-166 and another unidentified atom if active in the catalysis. A concerted proton transfer, similar to a “proton wire”, is one plausible mechanism that would allow argenine to function in the catalytic triad of a protease.
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== OspA and Lyme Disease ==
== OspA and Lyme Disease ==
<p>
<p>
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Like OspC and OspB, OspA's expression is differentially regulated over the <i>B. burgdorferi</i> infection cycle. OspA is expressed while the bacteria resides in the midgut of the tick, downregulated while the tick feeds on its host, and then upregulated in the host's cerebrospinal fluid (CSF), which may induce an inflammatory response resulting in acute Lyme [http://en.wikipedia.org/wiki/Neuroborreliosis neuroborreliosis]. As mentioned above, OspA, together with OspB, make up the major proteins found on the surface of <i>B. burgdorferi</i>. Because OspA is relatively highly expressed and relatively invariable it has been used as a target in the development of a vaccine for [http://en.wikipedia.org/wiki/Lyme_disease Lyme disease].
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Like OspC and OspB, the expression of OspA is regulated differently over the <i>B. burgdorferi</i> infection cycle. OspA is expressed while the bacteria resides in the midgut of the tick, downregulated while the tick feeds on its host, and then upregulated in the host's cerebrospinal fluid (CSF), which may induce an inflammatory response resulting in acute Lyme [http://en.wikipedia.org/wiki/Neuroborreliosis neuroborreliosis]. Because OspA is relatively highly expressed and relatively invariable it has been used as a target in the development of a vaccine for [http://en.wikipedia.org/wiki/Lyme_disease Lyme disease].
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OspA is involved in attachment of <i>B. burgdorferi</i> to the tick gut by binding to the Tick receptor for OspA (TROSPA). TROSPA is a tick gut protein which is required for colonization of the spirochete<ref name="pal">PMID: 15537536</ref>. When a tick feeds, OspA is downregulated, releasing the <i>B. burgdorferi</i> from the gut wall and allowing the bacteria to migrate into the tick's salivary glands and then into the host. The downregulation of OspA during transmission is evidenced by the fact that patients with Lyme disease do not possess OspA antibodies in the early stages of the disease.<ref name="connolly">PMID: 15864264</ref><ref name="rupprecht">PMID: 18097481</ref>
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OspA is involved in the attachment of <i>B. burgdorferi</i> to the tick gut by binding to the tick receptor for OspA (TROSPA). TROSPA is a tick gut protein that is required for colonization of the spirochetes in the midgut of the tick host<ref>PMID: 15537536</ref>. When a tick feeds, OspA is downregulated, releasing <i>B. burgdorferi</i> from the gut wall and allowing the bacteria to migrate into the tick's salivary glands and ultimately into the host. The downregulation of OspA during transmission is evidenced by the fact that patients with Lyme disease do not possess OspA antibodies in the early stages of the disease.<ref name="connolly">PMID: 15864264</ref><ref name="rupprecht">PMID: 18097481</ref>
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<h3>''Structure of OspA''</h3>
<h3>''Structure of OspA''</h3>
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<scene name='Studio:G2SecL03/Ospa_3loopscartoon/3'>OspA</scene> is made up of 273 residues over 21 anti-parallel β-sheets and a single α-helix. It's folded conformation is divided into three main sections: a N-terminus "sandwich," a central region comprising of several β-sheets and a C-terminus "barrel" domain.<ref name="ding">PMID: 11183781</ref> The folded regions at its ends are connected by a single β-sheet layer in the middle, giving the protein the unique shape of a dumbell.<ref name="makabe">PMID: 16823038</ref>
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<scene name='Studio:G2SecL03/Ospa_3loopscartoon/3'>OspA</scene> is made up of 273 residues over 21 anti-parallel β-sheets and a single α-helix. Its folded conformation is divided into three main sections: an N-terminus "sandwich," a central region comprising of several β-sheets, and a C-terminus "barrel" domain.<ref name="ding">PMID: 11183781</ref> The folded regions at its ends are connected by a single β-sheet layer in the middle that gives the protein the unique shape of a dumbbell.<ref name="makabe">PMID: 16823038</ref>
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There are <scene name='Studio:G2SecL03/Ospa-3loops/4'>three loops</scene> at the C-terminus of OspA that are important in binding with the LA-2 Fab antibody, whose interactions provide great insight into vaccine research and effectiveness. These three loops are linearly arranged and form protruding ridge at the C-terminus of OspA. Within these loops, there are <scene name='Studio:G2SecL03/Ospa-3residues-nor/3'>three residues</scene> <scene name='Studio:G2SecL03/Ospa-3residues-r/2'>(show residue R-groups)</scene> where there are distinct variations between the different strains of <i>B. burgdorferi</i> and serve as potential targets for the creation of a broader vaccine.<ref name="ding">PMID: 11183781</ref> <scene name='Studio:G2SecL03/Ospa-3loops3res/1'>(display both the three loops and three residues together)</scene>
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There are <scene name='Studio:G2SecL03/Ospa-3loops/4'>three loops</scene> at the C-terminus of OspA that are important in binding with the LA-2 Fab antibody (described below), whose interactions provide great insight into vaccine research and effectiveness. These three loops are linearly arranged and form a protruding ridge at the C-terminus of OspA. Within these loops are <scene name='Studio:G2SecL03/Ospa-3residues-nor/3'>three residues</scene> <scene name='Studio:G2SecL03/Ospa-3residues-r/2'>(show residue R-groups)</scene> containing distinct variations between the different strains of <i>B. burgdorferi</i> and serve as potential targets for the creation of a broader vaccine <scene name='Studio:G2SecL03/Ospa-3loops3res/1'>(display both the three loops and three residues together)</scene>.<ref name="ding">PMID: 11183781</ref>
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<scene name='Studio:G2SecL03/Ospa-loop1/1'>Loop 1</scene>, (residues 203-220), is important in showing variation amongst the different strains of <i>B. burgdorferi</i> as well as being optimally conformed for binding without steric hindrance. <scene name='Studio:G2SecL03/Ospa-loop2/1'>Loop 2</scene> (residues 224-233) and <scene name='Studio:G2SecL03/Ospa-loop3/1'>Loop 3</scene> (residues 246-257) are more strongly conserved than Loop 1 but also help to show some variation amongst strains. The LA-2 Fab antibody readily recognizes OspA from <i>B. burgdorferi</i>, but does not recognize that from <i>B. afzelii</i> or <i>B. garinii</i>.
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<scene name='Studio:G2SecL03/Ospa-loop1/1'>Loop 1</scene>, (residues 203-220), is important in showing variation amongst the different strains of <i>B. burgdorferi</i> as well as being optimally conformed for binding without steric hindrance. <scene name='Studio:G2SecL03/Ospa-loop2/1'>Loop 2</scene> (residues 224-233) and <scene name='Studio:G2SecL03/Ospa-loop3/1'>Loop 3</scene> (residues 246-257) are more strongly conserved than Loop 1 but also help to show some variation amongst strains. The LA-2 Fab antibody readily recognizes OspA from <i>B. burgdorferi</i>, but does not recognize that of <i>B. afzelii</i> or <i>B. garinii</i>.
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Between <i>B. burgdorferi</i> and <i>B. afzelii</i> genetic sequences are generally invariant, but two residues change between the species: <scene name='Studio:G2SecL03/Ospa-ala208/1'>Alanine (Ala) 208</scene> in <i>B. burgdorferi</i> is a Glutamine (Gln) in <i>B. afzelii</i>, and <scene name='Studio:G2SecL03/Ospa-asn251/1'>Asparagine (Asn) 251</scene> in <i>B. burgdorferi</i> is an Alanine (Ala) in <i>B. afzelii</i>. <i>B. garinii</i> has more variation and in addition to the previous two differences, having at least one more difference, where <scene name='Studio:G2SecL03/Ospa-ala215/1'>Alanine (Ala) 215</scene> in <i>B. burgdorferi</i> is a Lysine (Lys), and sometimes also has a deletion at <i>B. burgdorferi</i>’s Alanine 208. LA-2 and OspA of <i>B. burgdorferi</i> form a tight interface when binding, and the longer Glutamine (Gln) sidechain found in <i>B. afzelii</i> and <i>B. garinii</i> is more difficult to accommodate, causing less binding. A chimera that was weakly recognized by LA-2 was made with parts of loop 1 from <i>B. burgdorferi</i>, and loops 2 and 3 from <i>B. garinii</i>.<ref name="ding">PMID: 11183781</ref> Recently, a different kind of chimera has been made which combined the proximal region of <i>B. burgdorferi</i> and distal region of <i>B. afzelii</i>, and was able to successfully protect mice from both species.<ref name="livey">PMID: 21217174</ref>
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The<i>B. burgdorferi</i> and <i>B. afzelii</i> genetic sequences are generally invariant, but two residues change between the species: <scene name='Studio:G2SecL03/Ospa-ala208/1'>Ala208</scene> in <i>B. burgdorferi</i> is a glutamine (Gln) in <i>B. afzelii</i>, and <scene name='Studio:G2SecL03/Ospa-asn251/1'>Asn251</scene> in <i>B. burgdorferi</i> is an alanine in <i>B. afzelii</i>. <i>B. garinii</i> has more variation in addition to the previous two differences, having at least one more difference where <scene name='Studio:G2SecL03/Ospa-ala215/1'>Ala215</scene> in <i>B. burgdorferi</i> is a lysine in <i>B. garinii</i>, and sometimes also has a deletion at Ala208 of <i>B. burgdorferi</i>. LA-2 and OspA of <i>B. burgdorferi</i> form a tight interface when bound, and the longer glutamine sidechain found in <i>B. afzelii</i> and <i>B. garinii</i> is more difficult to accommodate, reducing binding. A chimera that was weakly recognized by LA-2 was made with parts of loop 1 from <i>B. burgdorferi</i> and loops 2 and 3 from <i>B. garinii</i>.<ref name="ding">PMID: 11183781</ref> Recently, a different kind of chimera has been made which combines the proximal region of <i>B. burgdorferi</i> and the distal region of <i>B. afzelii</i>; it was able to successfully protect mice from both species.<ref name="livey">PMID: 21217174</ref>
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<h3>Acute Lyme Neuroborreliosis (LNB)</h3>
<h3>Acute Lyme Neuroborreliosis (LNB)</h3>
<p>
<p>
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Acute Lyme Neuroborreliosis (LNB) is part of a later stage of Lyme disease in which the spirochete invades the peripheral and central nervous systems (CNS). Symptoms of LNB include: meningoradiculitis with inflammation of the nerve roots and [http://en.wikipedia.org/wiki/Radicular_pain radiculitis] (Bannwarth’s syndrome), lymphocytic meningitis, and cranial and [http://www.ncbi.nlm.nih.gov/pubmedhealth/PMH0001619/ peripheral neuritis]. In Europe, the strain predominantly found in the CSF of patients with Bannwarth's syndrome is <i>B. garinii</i>. However, in the United States, Bannwarth's syndrome is rare and the most common manifestations of Lyme neuroborreliosis is [http://en.wikipedia.org/wiki/Meningitis meningitis], caused by <i>B. burgdorferi</i>. The presence of OspA in the cerebrospinal fluid (CSF) is responsible for this complex inflammatory response in the brain that leads to the neuroborreliosis.<ref name="rupprecht">PMID: 18097481</ref>
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Acute Lyme Neuroborreliosis (LNB) is part of a later stage of Lyme disease in which the spirochete invades the peripheral and central nervous systems (CNS). Symptoms of LNB include: meningoradiculitis with inflammation of the nerve roots and [http://en.wikipedia.org/wiki/Radicular_pain radiculitis] (Bannwarth’s syndrome), lymphocytic meningitis, and cranial and [http://www.ncbi.nlm.nih.gov/pubmedhealth/PMH0001619/ peripheral neuritis]. In Europe, the strain predominantly found in the cerebrospinal fluid (CSF) of patients with Bannwarth's syndrome is <i>B. garinii</i>. However, in the United States, Bannwarth's syndrome is rare and the most common manifestations of Lyme neuroborreliosis is [http://en.wikipedia.org/wiki/Meningitis meningitis], caused by the presence of <i>B. burgdorferi</i> OspA in the CSF, which leads to this complex inflammatory response.<ref name="rupprecht">PMID: 18097481</ref>
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It is not fully understood how <i>B. burgdorferi</i> get past the [http://en.wikipedia.org/wiki/Blood-brain_barrier blood-brain barrier], though some researchers suggest a paracellular route, which involves a process using transient tether-type associations involving OspA. The blood-brain barrier is composed of brain microvascular endothelial cells, among other cells. Studies have shown that OspA adheres to brain microvascular cells by binding to the [[1aly|CD40]] receptors, which is followed by an induction of signaling cascades, and adhesion to endothelial cells, resulting in the movement of <i>B. burgdorferi</i> into the CNS. Similar cell signaling events are seen when leukocytes cross the blood brain barrier, and it has been proposed that <i>B. burgdorferi</i> may mimic this process. It has been found that not all strains of <i>B. burgdorferi</i> can utilize OspA to cross into the CNS, and OspA only contributes about 70% to adherence, and other <i>B. burgdorferi</i> proteins are also needed in this process. It has also been seen that OspA mediates the adhesion of <i>B. burgdorferi</i> to murine neural and glial cell lines. <ref name="pulzova">PMID: 22355605</ref>
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It is not fully understood how <i>B. burgdorferi</i> get past the [http://en.wikipedia.org/wiki/Blood-brain_barrier blood-brain barrier] composed of microvascular endohelial cells, among other cells, though some researchers suggest a paracellular route, which involves a process using transient tether-type associations involving OspA. . Studies have shown that OspA adheres to brain microvascular cells by binding to the [[1aly|CD40]] receptors, followed by an induction of signaling cascades and adhesion to endothelial cells, ultimately resulting in the movement of <i>B. burgdorferi</i> into the CNS. Similar cell signaling events are seen when leukocytes cross the blood-brain barrier, and it has been proposed that <i>B. burgdorferi</i> may mimic this process, although it has been found that not all strains of <i>B. burgdorferi</i> can utilize OspA to cross into the CNS. It has been found that OspA only contributes about 70% to adherence, and other <i>B. burgdorferi</i> proteins are also needed in this process; it has also been seen that OspA mediates the adhesion of <i>B. burgdorferi</i> to murine neural and glial cell lines. <ref name="pulzova">PMID: 22355605</ref>
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<p>
<p>
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There are many steps involved in the host's inflammatory response to OspA. When <i>B. burgdorferi</i> enter the host’s CNS they encounter several different types of immune cells such as [http://en.wikipedia.org/wiki/Monocyte monocytes], [http://en.wikipedia.org/wiki/Macrophages macrophages], and [http://en.wikipedia.org/wiki/Dendritic_cells dendritic cells]. While in the CSF, OspA is upregulated and it’s increased expression promotes recognition by immune cells, such as monocytes. Upon recognition of OspA, monocytes release proinflammatory [http://en.wikipedia.org/wiki/Cytokine cytokines] (i.e. [http://en.wikipedia.org/wiki/Interferon interferon]), as well as [http://en.wikipedia.org/wiki/Chemokine chemokines], such as [http://en.wikipedia.org/wiki/CXCL13 CXCL13]. In patients with LNB, there is an observed increase in the levels of these cytokines and chemokines in their CSF. The production of chemokines leads to the recruitment of other immune cells to the site of infection. [http://en.wikipedia.org/wiki/B_lymphocyte B-lymphocytes] respond to the new concentration gradient of CXCL13 and other chemokines between the blood and CSF and migrate into the CSF. The B-lymphocytes then differentiate and mature into [http://en.wikipedia.org/wiki/Plasma_cells plasma cells]. The plasma cells create large quantities of anti-OspA antibodies specific to this strain of <i>B. burgdorferi</i> and release them into the CSF to target the pathogen<ref name="rupprecht">PMID: 18097481</ref>. This process is two-sided in the sense that the OspA aids in the onset of new symptoms (neuroborreliosis) through the chemokine’s actions, as well as initiating the signaling cascade to destroy itself.
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There are many steps involved in the host's inflammatory response to OspA. When <i>B. burgdorferi</i> enter the host’s CNS, they encounter several different types of immune cells such as [http://en.wikipedia.org/wiki/Monocyte monocytes], [http://en.wikipedia.org/wiki/Macrophages macrophages], and [http://en.wikipedia.org/wiki/Dendritic_cells dendritic cells]. While in the CSF, OspA is upregulated, and its increased expression promotes recognition by immune cells, such as monocytes. Upon recognition of OspA, monocytes release proinflammatory [http://en.wikipedia.org/wiki/Cytokine cytokines] (i.e. [http://en.wikipedia.org/wiki/Interferon interferon]), as well as [http://en.wikipedia.org/wiki/Chemokine chemokines], such as [http://en.wikipedia.org/wiki/CXCL13 CXCL13].
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There is an observed increase in the levels of these cytokines and chemokines in the CSF of LNB patients. The production of chemokines leads to the recruitment of other immune cells to the site of infection. [http://en.wikipedia.org/wiki/B_lymphocyte B-lymphocytes] respond to the new concentration gradient of CXCL13 and other chemokines between the blood and CSF which leads to their migration into the CSF. The B-lymphocytes then differentiate and mature into antibody- producing [http://en.wikipedia.org/wiki/Plasma_cells plasma cells] that create large quantities of anti-OspA antibodies specific to this strain of <i>B. burgdorferi</i> and release them into the CSF to target the pathogen for destruction<ref name="rupprecht">PMID: 18097481</ref>. This process is two-sided in the sense that the OspA aids in the pathogenesis of <i>B. burgdorferi</i> (neuroborreliosis) as well as eliciting the host immune response to destroy the pathogens.
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<h3>Evasion and the Extracellular Matrix</h3>
<h3>Evasion and the Extracellular Matrix</h3>
<p>
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The <i>B. burgdorferi</i> are able to hide in the [http://en.wikipedia.org/wiki/Extracellular_matrix extracellular matrix], allowing it to survive by avoiding [http://en.wikipedia.org/wiki/Leukocytes leukocytes] circulating in the bloodstream. OspA can rapidly bind to plasminogen, which facilitates the spread of the bacteria<ref>PMID: 7790059</ref><ref>PMID: 9215633</ref>. By binding to plasminogen, <i>B. burgdorferi</i> could be exploiting its function and utilizing it to invade the extracellular matrix. However, due to the fact that OspA is downregulated during feeding, and stays unexpressed, a different mechanism may be used instead. Additionally, <i>B. burgdorferi</i> induces the local upregulation of matrix metalloproteinase-9, causing the digestion of the surrounding extracellular matrix. <i>B. burgdorferi</i> can also bind to several proteins in the extracellular matrix, such as [http://en.wikipedia.org/wiki/Fibronectin fibronectin], [http://en.wikipedia.org/wiki/Integrins integrins] or [http://en.wikipedia.org/wiki/Decorin decorin], which can aid in the spread and survival of the spirochetes in these tissues.<ref name="rupprecht">PMID: 18097481</ref>
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<i>B. burgdorferi</i> are able to hide in the [http://en.wikipedia.org/wiki/Extracellular_matrix extracellular matrix], allowing their survival by avoiding [http://en.wikipedia.org/wiki/Leukocytes leukocytes] circulating in the bloodstream. OspA can rapidly bind to plasminogen, facilitating the spread of the bacteria<ref>PMID: 7790059</ref><ref>PMID: 9215633</ref>. By binding to plasminogen, <i>B. burgdorferi</i> can exploit its function and utilize it to invade the extracellular matrix. However, due to the fact that OspA is downregulated during feeding while staying unexpressed, a different mechanism may be used instead. Additionally, <i>B. burgdorferi</i> induces the local upregulation of matrix metalloproteinase-9, causing the digestion of the surrounding extracellular matrix, and <i>B. burgdorferi</i> can also bind to several proteins in the extracellular matrix, such as [http://en.wikipedia.org/wiki/Fibronectin fibronectin], [http://en.wikipedia.org/wiki/Integrins integrins] or [http://en.wikipedia.org/wiki/Decorin decorin], which can aid in the spread and survival of the spirochetes in these tissues.<ref name="rupprecht">PMID: 18097481</ref>
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<h3>Antibodies to OspA</h3>
<h3>Antibodies to OspA</h3>
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<table width='450' align='right' cellpadding='5'><tr><td rowspan='2'>&nbsp;</td>
 
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<!-- <td bgcolor='#eeeeee'><Structure load='1FJ1' size='400' frame='true' align='center' scene='Studio:G1SecL01/2/1' />
 
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</td> --> </tr><tr><td bgcolor='#eeeeee'><center>'''OspA-LA2 Complex''' (<scene name='Studio:G1SecL01/2/1'>Initial Scene</scene>)<br>
 
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<scene name='Studio:G1SecL01/2/1'>OspA-LA2 Complex</scene>''':''' <scene name='Studio:G1SecL01/2/2'>Three Loops</scene> '''··''' <scene name='Studio:G1SecL01/2/3'>Ser 206</scene>
 
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</center></td></tr></table>
 
<h4>Interaction between OspA and LA-2</h4>
<h4>Interaction between OspA and LA-2</h4>
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LA-2 is an IgM murine monoclonal antibody that is being used in vaccine development that interacts with <scene name='Studio:G1SecL01/2/2'> three exposed loops </scene> on the C-terminal of OspA, as described above. These interactions include eight direct [[hydrogen bonds]], four solvent-bridged hydrogen bonds, three ion pairs, and numerous van der Waals interactions.<ref name=ding />
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LA-2 of the <scene name='Studio:G1SecL01/2/1'> OspA-LA2 Complex</scene> is an IgM murine monoclonal antibody that is being used in vaccine development that interacts with <scene name='Studio:G1SecL01/2/2'> three exposed loops </scene> on the C-terminal of OspA. These interactions include eight direct [[hydrogen bonds]], four solvent-bridged hydrogen bonds, three ion pairs, and numerous van der Waals interactions.<ref name=ding /> It is important to note that LA-2 depends on complement in order to create a bactericidal effect against <i>B. burgdorferi</i>.
<h5>Structural changes to OspA in the complexed form</h5>
<h5>Structural changes to OspA in the complexed form</h5>
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Conformational changes upon the binding of OspA and LA-2 show that LA-2 recognition of OspA involves an induced fit mechanism where the conformations of loops 1-3 shift to optimize complementarity to the antigen-combining site.<ref name=ding /> The overall structure of the C-terminal of OspA is unchanged upon the binding of LA-2 with comparison to the free OspA. The maximum atomic shift is 4.7Å at the site of <scene name='Studio:G1SecL01/2/3'>Ser 206</scene>.<ref name=ding>PMID: 11183781</ref>
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Conformational changes upon the binding of OspA and LA-2 show that LA-2 recognition of OspA involves an induced fit mechanism, where the conformations of loops 1-3 shift to optimize complementarity to the antigen-combining site.<ref name=ding /> The overall structure of the OspA C-terminus is unchanged upon the binding of LA-2 with comparison to the free OspA. The maximum atomic shift is 4.7Å at the site of <scene name='Studio:G1SecL01/2/3'>Ser 206</scene>.<ref name=ding>PMID: 11183781</ref>
<h3>OspA-based Vaccine</h3>
<h3>OspA-based Vaccine</h3>
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The membrane composition of <i>B. burgdorferi</i> is abundant in both OspA and OspB, and the two proteins share a 53% similarity in their primary sequences, however, OspB has greater variability than OspA.<ref name="becker">PMID: 15713683</ref>. Of the three exposed loops found on OspA, only loop 1 is variable while loops 2 and 3 are conserved. This makes OspA a more consistent antigen (compared to OspB and OspC) for the immune system to target and usable as a vaccine to Lyme disease.<ref name=ding /> The first vaccine developed against Lyme disease, Lymerix, used a purified recombinant form of OspA and functioned in blocking transmission of the spirochetes expressing OspA from tick to host during feeding, killing them while still attached to the tick's gut.<ref name="connolly">PMID: 15864264</ref><ref name="battisti">PMID: 18779341</ref> The vaccine was 76% to 92% effective in separate clinical trials in which patients were treated for two years following a three-dose schedule. However, the vaccine was suspended from use in 2002 when opponents claimed the [http://en.wikipedia.org/wiki/Immunoglobulin_G IgG antibodies] for OspA were associated with the onset of severe chronic arthritis, as well as other side effects affecting immunity.<ref name="connolly">PMID: 15864264</ref><ref name="plotkin">PMID: 21217175</ref> This claim, in conjunction with the desire for a more widespread vaccine treating multiple strains of <i>B. burgdorferi</i>, has spurred research towards a new vaccine. One goal is to develop a vaccine with broader protection, creation of a chimera, mixing the OspA of different strains of <i>B. burgdorferi</i>.
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The membrane composition of <i>B. burgdorferi</i> is abundant in both OspA and OspB, and the two proteins share a 53% similarity in their primary sequences, however, OspB has greater variability than OspA.<ref name="becker">PMID: 15713683</ref>. Of the three exposed loops found on OspA, only loop 1 is variable while loops 2 and 3 are conserved. This makes OspA a more consistent antigen (compared to OspB and OspC) for the immune system to target and usable as a vaccine to Lyme disease.<ref name=ding /> The first vaccine developed against Lyme disease, Lymerix, used a purified recombinant form of OspA and functioned in blocking transmission of the spirochetes expressing OspA from tick to host during feeding, killing them while still attached to the tick's gut.<ref name="connolly">PMID: 15864264</ref><ref name="battisti">PMID: 18779341</ref> The vaccine was 76% to 92% effective in separate clinical trials in which patients were treated for two years following a three-dose schedule. However, the vaccine was suspended from use in 2002 when opponents claimed the [http://en.wikipedia.org/wiki/Immunoglobulin_G IgG antibodies] for OspA were associated with the onset of severe chronic arthritis, as well as other side effects affecting immunity.<ref name="connolly">PMID: 15864264</ref><ref name="plotkin">PMID: 21217175</ref> This claim, in conjunction with the desire for a more widespread vaccine treating multiple strains of <i>B. burgdorferi</i>, has spurred research towards a new vaccine. One goal is to develop a vaccine with broader protection through the creation of a chimera by mixing the OspA of different strains of <i>B. burgdorferi</i>.
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Revision as of 05:34, 2 April 2014

PDB ID 1ggq

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Proteopedia Page Authors

Safa Abdelhakim, Frank J. Albergo, Irene Chen, Olivia Cheng, Rachel Cirineo, Jenny Kim Kim, Alexandros Konstantinidis, Cara Lin, Stephanie Maung, Christopher Morales, Andrea Mullen, Niamh B. O'Hara, Marvin H. O'Neal III, Philip J. Pipitone, Kimberly Slade, Christopher Smilios, Raymond Suhandynata, Khine Tun, Tanya Turkewitz, Ying Zhao, La Zhong, Jonathan Manit Wyrick.

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