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2yxy
From Proteopedia
(Difference between revisions)
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| - | + | ==Crystarl structure of Hypothetical conserved protein, GK0453== | |
| - | === | + | <StructureSection load='2yxy' size='340' side='right' caption='[[2yxy]], [[Resolution|resolution]] 2.20Å' scene=''> |
| - | + | == Structural highlights == | |
| + | <table><tr><td colspan='2'>[[2yxy]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus_hta426 Geobacillus kaustophilus hta426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YXY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YXY FirstGlance]. <br> | ||
| + | </td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yxy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yxy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2yxy RCSB], [http://www.ebi.ac.uk/pdbsum/2yxy PDBsum], [http://www.topsan.org/Proteins/RSGI/2yxy TOPSAN]</span></td></tr> | ||
| + | <table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yx/2yxy_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The crystal structure of a conserved hypothetical protein, GK0453, from Geobacillus kaustophilus has been determined to 2.2 A resolution. The crystal belonged to space group P43212, with unit-cell parameters a = b = 75.69, c = 64.18 A. The structure was determined by the molecular-replacement method and was refined to a final R factor of 22.6% (Rfree = 26.3%). Based on structural homology, the GK0453 protein possesses two independent binding sites and hence it may simultaneously interact with two proteins or with a protein and a nucleic acid. | ||
| - | + | Structure of the hypothetical DUF1811-family protein GK0453 from Geobacillus kaustophilus HTA426.,Padmanabhan B, Nakamura Y, Antonyuk SV, Strange RW, Hasnain SS, Yokoyama S, Bessho Y Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Apr 1;69(Pt 4):342-5. doi:, 10.1107/S1744309113003369. Epub 2013 Mar 28. PMID:23545635<ref>PMID:23545635</ref> | |
| - | + | ||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Geobacillus kaustophilus hta426]] | [[Category: Geobacillus kaustophilus hta426]] | ||
[[Category: Bessho, Y.]] | [[Category: Bessho, Y.]] | ||
Revision as of 04:23, 3 October 2014
Crystarl structure of Hypothetical conserved protein, GK0453
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Categories: Geobacillus kaustophilus hta426 | Bessho, Y. | Nakamu, Y. | Padmanabhan, B. | RSGI, RIKEN Structural Genomics/Proteomics Initiative. | Yokoyama, S. | Gk0453 | National project on protein structural and functional analyse | Nppsfa | Riken structural genomics/proteomics initiative | Rsgi | Structural genomic | Unknown function

