Nonstructural protein

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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
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{{#tree:id=OrganizedByTopic|openlevels=0|
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[[3o9q]], [[4opa]], [[4oph]] – IvNS1 (mutant) – Influenza virus<br />
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*Nonstructural protein
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[[3o9r]], [[3o9s]], [[3o9t]], [[3o9u]], [[3f5t]] – IvNS1<br />
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[[3m8a]], [[2z0a]], [[1xeq]], [[1ail]] – IvNS1 RNA-binding domain<br />
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[[3p31]] – IvNS1 C terminal effector domain<br />
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[[3p38]], [[3p39]] – IvNS1 C terminal effector domain (mutant)<br />
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[[1ns1]] - IvNS1 RNA-binding domain - NMR<br />
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[[3m5r]], [[2gx9]] - IvNS1 effector domain<br />
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[[1pd3]] – IvNS2 M1-binding domain<br />
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[[3l6p]], [[3lkw]] – DvNS2B/3 protease domain (mutant) – Dentue virus<br />
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-
[[2o1j]] – RvNSP4 diarrhea-inducing domain – Rotavirus<br />
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[[2gu0]] – RvNS2<br />
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[[2ajj]], [[2ajm]], [[2ajn]], [[2ajo]] – NS5A membrane-anchor domain – bovine viral diarrhea virus – NMR<br />
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[[1fw5]] – NSP1 membrane-binding domain – Semliki forest virus – NMR<br />
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[[1qol]] – NSP20A (mutant) - Foot-and-mouth disease virus<br />
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[[1nhu]] – HvNS5B RNA-dependent RNA polymerase residues 2420-2989 – Hepatitis C virus<br />
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[[1r7c]], [[1r7d]], [[1r7e]], [[1r7f]], [[1r7g]] - HvNS5A membrane-anchor domain - NMR<br />
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[[2gdt]], [[2hsx]] – SvNS1 (mutant) – Sars coronavirus – NMR<br />
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[[2jzd]], [[2jze]], [[2jzf]], [[2rnk]] – SvNS3 residues 527-651 – NMR<br />
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[[2kaf]] - SvNS3 residues 1473-1532 – NMR <br />
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[[2kys]] – SvNS7 – NMR<br />
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[[2l8k]] – NS7 residues 1454-1575 – NMR<br />
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[[3mtv]] – NS1 residues 181-383 – PRRS virus <br />
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[[3zfn]], [[3zfo]], [[3zfq]], [[3zfp]], [[3zfr]], [[3zft]], [[3zfu]] – Npro (mutant) – Pestivirus<br />
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===Nonstructural protein binary complex===
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**[[3o9q]], [[4opa]], [[4oph]] – IvNS1 (mutant) – Influenza virus<br />
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**[[3o9r]], [[3o9s]], [[3o9t]], [[3o9u]], [[3f5t]] – IvNS1<br />
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**[[3m8a]], [[2z0a]], [[1xeq]], [[1ail]] – IvNS1 RNA-binding domain<br />
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**[[3p31]] – IvNS1 C terminal effector domain<br />
 +
**[[3p38]], [[3p39]] – IvNS1 C terminal effector domain (mutant)<br />
 +
**[[1ns1]] - IvNS1 RNA-binding domain - NMR<br />
 +
**[[3m5r]], [[2gx9]] - IvNS1 effector domain<br />
 +
**[[1pd3]] – IvNS2 M1-binding domain<br />
 +
**[[3l6p]], [[3lkw]] – DvNS2B/3 protease domain (mutant) – Dentue virus<br />
 +
**[[2o1j]] – RvNSP4 diarrhea-inducing domain – Rotavirus<br />
 +
**[[2gu0]] – RvNS2<br />
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**[[2ajj]], [[2ajm]], [[2ajn]], [[2ajo]] – NS5A membrane-anchor domain – bovine viral diarrhea virus – NMR<br />
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**[[1fw5]] – NSP1 membrane-binding domain – Semliki forest virus – NMR<br />
 +
**[[1qol]] – NSP20A (mutant) - Foot-and-mouth disease virus<br />
 +
**[[1nhu]] – HvNS5B RNA-dependent RNA polymerase residues 2420-2989 – Hepatitis C virus<br />
 +
**[[1r7c]], [[1r7d]], [[1r7e]], [[1r7f]], [[1r7g]] - HvNS5A membrane-anchor domain - NMR<br />
 +
**[[2gdt]], [[2hsx]] – SvNS1 (mutant) – Sars coronavirus – NMR<br />
 +
**[[2jzd]], [[2jze]], [[2jzf]], [[2rnk]] – SvNS3 residues 527-651 – NMR<br />
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**[[2kaf]] - SvNS3 residues 1473-1532 – NMR <br />
 +
**[[2kys]] – SvNS7 – NMR<br />
 +
**[[2l8k]] – NS7 residues 1454-1575 – NMR<br />
 +
**[[3mtv]] – NS1 residues 181-383 – PRRS virus <br />
 +
**[[3zfn]], [[3zfo]], [[3zfq]], [[3zfp]], [[3zfr]], [[3zft]], [[3zfu]] – Npro (mutant) – Pestivirus<br />
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[[2xbm]] – DvNS5 methyltransferase domain + RNA<br />
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*Nonstructural protein binary complex
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[[2hye]] – SvNSV + DNA damage-binding protein + cullin-4A + ring-box protein – Simian virus 5<br />
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[[2b5l]] - SvNSV + DNA damage-binding protein<br />
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[[1nhv]] – HvNS5B RNA-dependent RNA polymerase residues 2420-2989 + inhibitor<br />
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[[1dxp]], [[1dy8]], [[1dy9]], [[1w3c]] – HvNS4A + HvHelicase NS3<br />
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[[4a1t]], [[4a1x]] - HvNS4A + peptide inhibitor<br />
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[[3phe]] – HvNS5B + quinolone derivative<br />
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[[3ub0]] – NSP6 + NSP7 – Feline infectious peritonitis virus<br />
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[[1knz]] – RvNSP34 N terminal + mRNA<br />
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[[1lj2]] – RvNSP34 C terminal + eukaryotic protein synthesis initiation factor peptide<br />
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**[[2xbm]] – DvNS5 methyltransferase domain + RNA<br />
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**[[2hye]] – SvNSV + DNA damage-binding protein + cullin-4A + ring-box protein – Simian virus 5<br />
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**[[2b5l]] - SvNSV + DNA damage-binding protein<br />
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**[[1nhv]] – HvNS5B RNA-dependent RNA polymerase residues 2420-2989 + inhibitor<br />
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**[[1dxp]], [[1dy8]], [[1dy9]], [[1w3c]] – HvNS4A + HvHelicase NS3<br />
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**[[4a1t]], [[4a1x]] - HvNS4A + peptide inhibitor<br />
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**[[3phe]] – HvNS5B + quinolone derivative<br />
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**[[3ub0]] – NSP6 + NSP7 – Feline infectious peritonitis virus<br />
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**[[1knz]] – RvNSP34 N terminal + mRNA<br />
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**[[1lj2]] – RvNSP34 C terminal + eukaryotic protein synthesis initiation factor peptide<br />
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}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 12:36, 1 December 2014

Template:STRUCTURE 3o9s

Nonstructural protein (NS) is a protein encoded by a virus which is not part of the viral particle. Pestivirus encode a NS at the N-terminal of their poluproteins (Npro). For homology model and multiple sequence alignment see


3D Structures of Nonstructural protein

Updated on 01-December-2014

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky

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