Nucleoside diphosphate kinase

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{{#tree:id=OrganizedByTopic|openlevels=0|
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===Nucleoside diphosphate kinase===
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*'''Nucleoside diphosphate kinase'''
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[[1ndk]], [[1npk]], [[1s5z]] – DdNDK – ''Dictyostelium discoideum''<BR />
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**[[1ndk]], [[1npk]], [[1s5z]] – DdNDK – ''Dictyostelium discoideum''<BR />
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[[1nlk]], [[1nsp]] - DdNDK with phosphohistidine intermediate<BR />
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**[[1nlk]], [[1nsp]] - DdNDK with phosphohistidine intermediate<BR />
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[[1leo]], [[1ncl]], [[1hlw]], [[1hhq]], [[1pae]], [[4c6a]] - DdNDK (mutant) <BR />
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**[[1leo]], [[1ncl]], [[1hlw]], [[1hhq]], [[1pae]], [[4c6a]] - DdNDK (mutant) <BR />
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[[2nck]] – MxNDK – ''Myxococcus xanthus''<BR />
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**[[2nck]] – MxNDK – ''Myxococcus xanthus''<BR />
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[[1ndl]] – DmNDK – ''Drosophila melanogaster''<BR />
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**[[1ndl]] – DmNDK – ''Drosophila melanogaster''<BR />
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[[1nsq]] - DmNDK with phosphohistidine intermediate<BR />
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**[[1nsq]] - DmNDK with phosphohistidine intermediate<BR />
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[[1nsk]], [[1jxv]], [[3l7u]], [[4eno]] - hNDK A – human<BR />
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**[[1nsk]], [[1jxv]], [[3l7u]], [[4eno]] - hNDK A – human<BR />
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[[1ehw]] - hNDK 4 (mutant) <BR />
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**[[1ehw]] - hNDK 4 (mutant) <BR />
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[[3bbc]] - hNDK B (mutant)<br />
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**[[3bbc]] - hNDK B (mutant)<br />
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[[1k44]], [[4anc]] – MtNDK – ''Mycobacterium tuberculosis''<BR />
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**[[1k44]], [[4anc]] – MtNDK – ''Mycobacterium tuberculosis''<BR />
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[[4and]], [[4ane]] - MtNDK (mutant)<br />
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**[[4and]], [[4ane]] - MtNDK (mutant)<br />
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[[1nb2]] - NDK - ''Virgibacillus halodenitrificans''<BR />
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**[[1nb2]] - NDK - ''Virgibacillus halodenitrificans''<BR />
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[[1xiq]] - NDK A – ''Plasmodium falciparum''<BR />
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**[[1xiq]] - NDK A – ''Plasmodium falciparum''<BR />
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[[1w7w]] - NDK – pea<BR />
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**[[1w7w]] - NDK – pea<BR />
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[[1u8w]] - AtNDK I –'' Arabidopsis thaliana''<BR />
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**[[1u8w]] - AtNDK I –'' Arabidopsis thaliana''<BR />
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[[1s57]] - AtNDK II<BR />
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**[[1s57]] - AtNDK II<BR />
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[[1pku]] - NDK I – rice<BR />
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**[[1pku]] - NDK I – rice<BR />
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[[1wkj]] - TtNDK – ''Thermus thermophilus''<BR />
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**[[1wkj]] - TtNDK – ''Thermus thermophilus''<BR />
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[[1xqi]] - NDK (mutant) – ''Pyrobaculum aerophilum''<BR />
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**[[1xqi]] - NDK (mutant) – ''Pyrobaculum aerophilum''<BR />
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[[2az1]] - HsNDK – ''Halobacterium salinarum''<BR />
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**[[2az1]] - HsNDK – ''Halobacterium salinarum''<BR />
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[[2hur]] - NDK – ''Escherichia coli''<BR />
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**[[2hur]] - NDK – ''Escherichia coli''<BR />
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[[3b54]] - NDK – yeast<BR />
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**[[3b54]] - NDK – yeast<BR />
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[[2vu5]] - NDK – ''Bacillus anthracis''<BR />
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**[[2vu5]] - NDK – ''Bacillus anthracis''<BR />
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[[2zua]] - NDK – ''Haloarcula quadrata''<BR />
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**[[2zua]] - NDK – ''Haloarcula quadrata''<BR />
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[[3mpd]] - NDK – ''Encephalitozoon cuniculi''<BR />
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**[[3mpd]] - NDK – ''Encephalitozoon cuniculi''<BR />
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[[3pj9]] - NDK – ''Campylobacter jejuni''<BR />
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**[[3pj9]] - NDK – ''Campylobacter jejuni''<BR />
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[[3r9l]] - NDK – ''Giardia lamblia''<BR />
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**[[3r9l]] - NDK – ''Giardia lamblia''<BR />
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[[3ngr]], [[3ngs]] - LmNDK – ''Leishmania major''<BR />
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**[[3ngr]], [[3ngs]] - LmNDK – ''Leishmania major''<BR />
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[[3prv]] - NDK – ''Trypanosoma cruzi''<BR />
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**[[3prv]] - NDK – ''Trypanosoma cruzi''<BR />
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[[3q83]] - SaNDK – ''Staphylococcus aureus''<BR />
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**[[3q83]] - SaNDK – ''Staphylococcus aureus''<BR />
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[[4di6]] - BbNDK – ''Borrelia burgdorferi''<BR />
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**[[4di6]] - BbNDK – ''Borrelia burgdorferi''<BR />
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[[3ztq]], [[3zto]], [[3ztp]], [[3ztr]], [[3zts]] - NDK – ''Aquifex aeolicus''<BR />
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**[[3ztq]], [[3zto]], [[3ztp]], [[3ztr]], [[3zts]] - NDK – ''Aquifex aeolicus''<BR />
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[[4dut]] - BtNDK – ''Burkholderia thailandensis''<br />
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**[[4dut]] - BtNDK – ''Burkholderia thailandensis''<br />
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[[2cwk]] - PhNDK – ''Pyrococcus horikoshii''<br />
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**[[2cwk]] - PhNDK – ''Pyrococcus horikoshii''<br />
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[[3vgs]], [[3vgt]] - HaNDK – ''Halomonas''<br />
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**[[3vgs]], [[3vgt]] - HaNDK – ''Halomonas''<br />
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[[3vgu]], [[3vgv]] - HaNDK (mutant)<br />
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**[[3vgu]], [[3vgv]] - HaNDK (mutant)<br />
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[[3vvt]] - NDK – reconstructed archaeal ancestral<br />
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**[[3vvt]] - NDK – reconstructed archaeal ancestral<br />
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[[3vvu]] - NDK – reconstructed bacterial ancestral<br />
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**[[3vvu]] - NDK – reconstructed bacterial ancestral<br />
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[[4f36]] – TbNDK – ''Trypanosoma brucei''<br />
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**[[4f36]] – TbNDK – ''Trypanosoma brucei''<br />
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===NDK complex with adenine derivative===
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*NDK complex with adenine derivative
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[[1ndp]], [[1kdn]], [[2bef]] – DdNDK + ADP<BR />
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**[[1ndp]], [[1kdn]], [[2bef]] – DdNDK + ADP<BR />
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[[1b4s]] - DdNDK (mutant) + ADP<BR />
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**[[1b4s]] - DdNDK (mutant) + ADP<BR />
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[[1bux]], [[1hiy]] - DdNDK + ADP derivative<br />
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**[[1bux]], [[1hiy]] - DdNDK + ADP derivative<br />
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[[1nlk]] - MxNDK + ADP<BR />
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**[[1nlk]] - MxNDK + ADP<BR />
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[[2hvd]] - hNDK + ADP<BR />
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**[[2hvd]] - hNDK + ADP<BR />
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[[1ucn]], [[2hve]] - hNDK (mutant) + ADP<BR />
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**[[1ucn]], [[2hve]] - hNDK (mutant) + ADP<BR />
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[[1zs6]] - hNDK 3 + ADP<BR />
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**[[1zs6]] - hNDK 3 + ADP<BR />
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[[2dxd]] - PhNDK + ATP analog <BR />
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**[[2dxd]] - PhNDK + ATP analog <BR />
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[[2dy9]], [[2dya]] - PhNDK + ADP<BR />
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**[[2dy9]], [[2dya]] - PhNDK + ADP<BR />
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[[3ngt]] - LmNDK + AMP<BR />
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**[[3ngt]] - LmNDK + AMP<BR />
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[[3ngu]] - LmNDK + ADP<BR />
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**[[3ngu]] - LmNDK + ADP<BR />
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[[3q8u]], [[3q8y]] - SaNDK + ADP<BR />
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**[[3q8u]], [[3q8y]] - SaNDK + ADP<BR />
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[[4dz6]] - BbNDK + ADP<BR />
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**[[4dz6]] - BbNDK + ADP<BR />
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[[1wkl]] - TtNDK + ADP + ATP<br />
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**[[1wkl]] - TtNDK + ADP + ATP<br />
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[[4ek2]] - BtNDK + AMP derivative<br />
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**[[4ek2]] - BtNDK + AMP derivative<br />
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[[4hr2]] - BtNDK + ADP<br />
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**[[4hr2]] - BtNDK + ADP<br />
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===NDK complex with thymidine derivative===
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*NDK complex with thymidine derivative
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[[1f3f]] - DdNDK (mutant) + TDP derivative + TTP derivative<br />
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**[[1f3f]] - DdNDK (mutant) + TDP derivative + TTP derivative<br />
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[[1lwx]] - DdNDK (mutant) + azido-TDP<BR />
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**[[1lwx]] - DdNDK (mutant) + azido-TDP<BR />
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[[1f6t]] - DdNDK + TDP derivative<br />
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**[[1f6t]] - DdNDK + TDP derivative<br />
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[[1mn7]] - DdNDK (mutant) + TTP derivative<br />
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**[[1mn7]] - DdNDK (mutant) + TTP derivative<br />
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[[1ndc]] - DdNDK + TDP<BR />
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**[[1ndc]] - DdNDK + TDP<BR />
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[[3ddi]] - ApNDK (mutant) + TDP – ''Acanthamoeba polyphaga''<BR />
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**[[3ddi]] - ApNDK (mutant) + TDP – ''Acanthamoeba polyphaga''<BR />
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[[3em1]], [[3evw]], [[3fbc]], [[3fbf]], [[3g2x]], [[3evo]] - ApNDK (mutant) + TDP derivative<br />
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**[[3em1]], [[3evw]], [[3fbc]], [[3fbf]], [[3g2x]], [[3evo]] - ApNDK (mutant) + TDP derivative<br />
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===NDK complex with cytosine derivative===
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*NDK complex with cytosine derivative
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[[1nhk]] - MxNDK + CMP<BR />
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**[[1nhk]] - MxNDK + CMP<BR />
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[[2az3]] - HsNDK + CDP<BR />
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**[[2az3]] - HsNDK + CDP<BR />
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[[3ee3]] - ApNDK + CDP<BR />
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**[[3ee3]] - ApNDK + CDP<BR />
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[[3etm]], [[3gpa]], [[3fc9]] - ApNDK (mutant) + CDP<BR />
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**[[3etm]], [[3gpa]], [[3fc9]] - ApNDK (mutant) + CDP<BR />
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[[3evm]] - ApNDK (mutant) + CDP derivative<br />
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**[[3evm]] - ApNDK (mutant) + CDP derivative<br />
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[[3q89]] - SaNDK + CDP<BR />
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**[[3q89]] - SaNDK + CDP<BR />
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[[4fkx]] - TbNDK + CDP<br />
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**[[4fkx]] - TbNDK + CDP<br />
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===NDK complex with guanine derivative===
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*NDK complex with guanine derivative
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[[1nue]] , [[3bbf]] - hNDK + GDP<BR />
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**[[1nue]] , [[3bbf]] - hNDK + GDP<BR />
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[[1s59]] - AtNDK + GDP derivative + GTP derivative<br />
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**[[1s59]] - AtNDK + GDP derivative + GTP derivative<br />
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[[3bbb]] - hNDK B + GMP derivative + AMP derivative<br />
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**[[3bbb]] - hNDK B + GMP derivative + AMP derivative<br />
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[[1wkk]] - TtNDK + GDP<BR />
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**[[1wkk]] - TtNDK + GDP<BR />
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[[2dxe]] - PhNDK + GDP<BR />
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**[[2dxe]] - PhNDK + GDP<BR />
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[[2dxf]] - PhNDK + GTP analog<BR />
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**[[2dxf]] - PhNDK + GTP analog<BR />
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[[3gp9]] - ApNDK + GDP<BR />
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**[[3gp9]] - ApNDK + GDP<BR />
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[[3b6b]] - ApNDK + GDP derivative<br />
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**[[3b6b]] - ApNDK + GDP derivative<br />
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[[3fbe]], [[3dkd]], [[3ejm]] - ApNDK (mutant) + GDP<BR />
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**[[3fbe]], [[3dkd]], [[3ejm]] - ApNDK (mutant) + GDP<BR />
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[[3emt]], [[3ena]] - ApNDK (mutant) + GDP derivative<br />
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**[[3emt]], [[3ena]] - ApNDK (mutant) + GDP derivative<br />
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[[3q86]] - SaNDK + GTP
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**[[3q86]] - SaNDK + GTP
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===NDK complex with uridine derivative===
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*NDK complex with uridine derivative
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[[1b99]] - DdNDK + UDP derivative<br />
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**[[1b99]] - DdNDK + UDP derivative<br />
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[[3eic]] - ApNDK + UDP<BR />
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**[[3eic]] - ApNDK + UDP<BR />
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[[3elh]] - ApNDK + UDP derivative<br />
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**[[3elh]] - ApNDK + UDP derivative<br />
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[[3fbb]], [[3fcv]] - ApNDK (mutant) + UDP derivative<br />
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**[[3fbb]], [[3fcv]] - ApNDK (mutant) + UDP derivative<br />
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[[3fcw]] - ApNDK (mutant) + UDP<BR />
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**[[3fcw]] - ApNDK (mutant) + UDP<BR />
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[[3q8v]] - SaNDK + UDP<BR />
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**[[3q8v]] - SaNDK + UDP<BR />
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[[4f4a]] - TbNDK + UDP<br />
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**[[4f4a]] - TbNDK + UDP<br />
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[[1mn9]], [[3fkb]] - DdNDK (mutant) + antiviral drug
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*NDK complex with antiviral drug
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**[[1mn9]], [[3fkb]] - DdNDK (mutant) + antiviral drug
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}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 07:42, 2 December 2014

Template:STRUCTURE 1nsk

Nucleoside diphosphate kinase (NDK) catalyzes the transfer of phosphate from nucleoside triphosphate to nucleoside diphosphate. This reaction is a multi-step reaction and is used for the synthesis of nucleoside triphosphates other than ATP. NDK provides nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, UTP for polysaccharide synthesis and GTP for protein elongation, signal transduction and microtubule polymerization.

3D structures of nucleoside diphosphate kinase

Updated on 02-December-2014

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

Retrieved from "http://52.214.119.220/wiki/index.php/Nucleoside_diphosphate_kinase"
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