Sandbox Reserved 954

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===Conformational changes of serpins===
===Conformational changes of serpins===
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The inhibitory members of serpin family undergo an unusual conformational change, the Stressed to Relaxed transition. This structural transition causes the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> insertion into <scene name='60/604473/A_beta_sheet/3'>A β-sheet</scene> thereby the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> forms an extra β strand. The serpin conformational change is essential for the inhibitor mechanism of proteases. <scene name='60/604473/Rcl_insertion_into_beta_sheet/1'>Some amino-acids of RCL</scene> wich belong to a consensus sequence for inhibitory serpins are thought to permit the insertion of the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> into the <scene name='60/604473/A_beta_sheet/3'>A β-sheet</scene>.<ref> James C Whisstocka, 2, Richard Skinnera, 2, Robin W Carrella, Arthur M Leska, Conformational changes in serpins: I. the native and cleaved conformations of α1-antitrypsin1, http://www.sciencedirect.com/science/article/pii/S0022283699935209 DOI:10.1006/jmbi.1999.3520</ref>Key regions able to control and modulate the conformational change of RCL. The hinge which is the P15-P9 portion of the RCL. This region is responsible for the mobility which is essential during the conformational change in the Stress to Relax transition. The breach is situated in the top of the β-sheet. It is located at the point of initial insertion of the RCL into the A β-sheet. The shutter is next to the A-β sheet. It facilitates the beta-sheet opening and accept the conserved hinge of the RCL as it insert. The gate is fully inserted into the A β-sheet without cleavage, the RCL has to pass around the β-turn linking strands.
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The inhibitory members of serpin family undergo an unusual conformational change, the Stressed to Relaxed transition. This structural transition causes the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> insertion into <scene name='60/604473/A_beta_sheet/3'>A β-sheet</scene> thereby the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> forms an extra β strand. The serpin conformational change is essential for the inhibitor mechanism of proteases. <scene name='60/604473/Rcl_insertion_into_beta_sheet/1'>Some amino-acids of RCL</scene> wich belong to a consensus sequence for inhibitory serpins are thought to permit the insertion of the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> into the <scene name='60/604473/A_beta_sheet/3'>A β-sheet</scene>.<ref> James C Whisstocka, 2, Richard Skinnera, 2, Robin W Carrella, Arthur M Leska, Conformational changes in serpins: I. the native and cleaved conformations of α1-antitrypsin1, http://www.sciencedirect.com/science/article/pii/S0022283699935209 DOI:10.1006/jmbi.1999.3520</ref>Key regions able to control and modulate the conformational change of RCL. The hinge which is the <scene name='60/604473/P9-p15/1'>P15-P9 portion of the RCL</scene> is responsible for the mobility which is essential during the conformational change in the Stress to Relax transition. The breach is situated in the top of the <scene name='60/604473/A_beta_sheet/3'>β-sheet</scene>. It is located at the point of initial insertion of the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> into the <scene name='60/604473/A_beta_sheet/3'>A β-sheet</scene>. The shutter is next to the <scene name='60/604473/A_beta_sheet/3'>A β-sheet</scene>. It facilitates the beta-sheet opening and accept the conserved hinge of the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> as it insert. The gate is fully inserted into the <scene name='60/604473/A_beta_sheet/3'>A β-sheet</scene> without cleavage, the <scene name='60/604473/The_rcl_loop_scene/3'>RCL</scene> has to pass around the β-turn linking strands.

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SQUAMOUS CELL CARCINOMA ANTIGEN 1

Tridimensional structure of Squamous cell carcinoma antigen 1 (PDB code 2zv6)

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