Sandbox 4465
From Proteopedia
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Its importance can be exemplified by the fact that the protein has been known to be highly conserved in eukaryotes. Highly conserved structures that do not undergo significant evolutionary changes imply that the structure is mandatory for cell or organism survival and that any mutations in the genetic sequence that codes for the protein would be deleterious. The function of calmodulin is typically studied using yeast as a model organism. This is done for a variety of reasons, including the fact that yeast has a fully annotated genome with human homologues for genes associated with their ion channels, yeast is fast growing and they are heat stable<ref>Wolfe, D. M. D. M. (2006). Channeling studies in yeast: Yeast as a model for channelopathies?</ref>. | Its importance can be exemplified by the fact that the protein has been known to be highly conserved in eukaryotes. Highly conserved structures that do not undergo significant evolutionary changes imply that the structure is mandatory for cell or organism survival and that any mutations in the genetic sequence that codes for the protein would be deleterious. The function of calmodulin is typically studied using yeast as a model organism. This is done for a variety of reasons, including the fact that yeast has a fully annotated genome with human homologues for genes associated with their ion channels, yeast is fast growing and they are heat stable<ref>Wolfe, D. M. D. M. (2006). Channeling studies in yeast: Yeast as a model for channelopathies?</ref>. | ||
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== Calmodulin in the body == | == Calmodulin in the body == | ||
- | Calmodulin is located and used ubiquitously, but is especially prevalent in brain and muscle tissue. Calmodulin in the cell is mainly localized in organelles and binds to Calcium which then promotes the phosphorylation of protein kinases and activation of other proteins to begin signal transduction for a variety of different pathways, mainly different forms of cell signaling. The phosphorylation of these protein-kinases occurs when Ca2+ reach about 1000 nM and initiates a rapid signaling pathway. | + | Calmodulin is located and used ubiquitously, but is especially prevalent in brain and muscle tissue. Calmodulin in the cell is mainly localized in organelles and binds to Calcium which then promotes the phosphorylation of protein kinases and activation of other proteins to begin signal transduction for a variety of different pathways, mainly different forms of cell signaling. The phosphorylation of these protein-kinases occurs when Ca2+ reach about 1000 nM and initiates a rapid signaling pathway<ref>doi:10.1038/35036035</ref>. |
== Structural Highlights == | == Structural Highlights == | ||
- | Calmodulin has a molecular mass of 16 kilodaltons (kD) and it functions along with ryanodine receptor (RyR). CaM consists of 148 amino acid residues that is characterized by a helix-loop-helix binding motif, also known as the EF hand. Calmodulin has one subunit with a distinct dumbbell shape in which a linker region joins two globular domains. Calmodulin is known to undergo a conformational change upon binding with a calcium ion in which each lobe transitions from a closed conformation to an open conformation. Calmodulin typically wraps around its target, with the two globular domains gripping either side of it. NMR studies clearly show that the connector between the two calcium binding globular domains is flexible even when it is not bound to its target proteins. However, the full range of flexibility can be seen in calmodulin interactions with its target proteins. | + | Calmodulin has a molecular mass of 16 kilodaltons (kD) and it functions along with ryanodine receptor (RyR)<ref>doi: 10.1242/jcs.133454</ref>. CaM consists of 148 amino acid residues that is characterized by a helix-loop-helix binding motif, also known as the EF hand <ref>doi:10.1016/S0006-3495(98)77876-2</ref>. Calmodulin has one subunit with a distinct dumbbell shape in which a linker region joins two globular domains<ref>doi:10.1371/journal.pcbi.1004063</ref>. Calmodulin is known to undergo a conformational change upon binding with a calcium ion in which each lobe transitions from a closed conformation to an open conformation<ref>doi:10.1002/elps.1150110104</ref>. Calmodulin typically wraps around its target, with the two globular domains gripping either side of it. NMR studies clearly show that the connector between the two calcium binding globular domains is flexible even when it is not bound to its target proteins. However, the full range of flexibility can be seen in calmodulin interactions with its target proteins. |
== Function == | == Function == |
Revision as of 21:33, 5 December 2015
Calmodulin
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Bibliography
- ↑ Eldik, L., & Watterson, D. (1998). Calmodulin and signal transduction
- ↑ Wolfe, D. M. D. M. (2006). Channeling studies in yeast: Yeast as a model for channelopathies?
- ↑
- ↑ Berridge MJ, Lipp P, Bootman MD. The versatility and universality of calcium signalling. Nat Rev Mol Cell Biol. 2000 Oct;1(1):11-21. PMID:11413485 doi:http://dx.doi.org/10.1038/35036035
- ↑ Huang X, Liu Y, Wang R, Zhong X, Liu Y, Koop A, Chen SR, Wagenknecht T, Liu Z. Two potential calmodulin-binding sequences in the ryanodine receptor contribute to a mobile, intra-subunit calmodulin-binding domain. J Cell Sci. 2013 Oct 1;126(Pt 19):4527-35. doi: 10.1242/jcs.133454. Epub 2013 Jul, 18. PMID:23868982 doi:http://dx.doi.org/10.1242/jcs.133454
- ↑ Wriggers W, Mehler E, Pitici F, Weinstein H, Schulten K. Structure and dynamics of calmodulin in solution. Biophys J. 1998 Apr;74(4):1622-39. doi: 10.1016/S0006-3495(98)77876-2. PMID:9545028 doi:http://dx.doi.org/10.1016/S0006-3495(98)77876-2
- ↑ Lai M, Brun D, Edelstein SJ, Le Novere N. Modulation of calmodulin lobes by different targets: an allosteric model with hemiconcerted conformational transitions. PLoS Comput Biol. 2015 Jan 22;11(1):e1004063. doi: 10.1371/journal.pcbi.1004063. , eCollection 2015 Jan. PMID:25611683 doi:http://dx.doi.org/10.1371/journal.pcbi.1004063
- ↑ Chan KF, Chen WH. High performance capillary electrophoresis of calmodulin. Electrophoresis. 1990 Jan;11(1):15-8. PMID:2108018 doi:http://dx.doi.org/10.1002/elps.1150110104