User:Cody Couperus/Sandbox 3
From Proteopedia
< User:Cody Couperus(Difference between revisions)
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==Introduction== | ==Introduction== | ||
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-single stranded polynucleic acid | -single stranded polynucleic acid | ||
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-Transcribed from DNA by family of RNA polymerases | -Transcribed from DNA by family of RNA polymerases | ||
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-Functional roles include functional transfer for protein synthesis, catalysis, cellular regulation | -Functional roles include functional transfer for protein synthesis, catalysis, cellular regulation | ||
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-Degraded by.... | -Degraded by.... | ||
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==Degradation pathways== | ==Degradation pathways== | ||
==Structure General== | ==Structure General== | ||
| - | Summary of - how to build a 3D structure from a linear medium. Practical considerations. How to think about folded polymers. | + | Summary of - how to build a 3D structure from a linear medium. Practical considerations. How to think about |
| + | folded polymers. | ||
| + | |||
Backbone | Backbone | ||
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Ribose | Ribose | ||
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Bases + base pairing | Bases + base pairing | ||
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Forces: stacking (VDW), hydrogen bond, hydrophobic effect, electrostatic | Forces: stacking (VDW), hydrogen bond, hydrophobic effect, electrostatic | ||
==Primary Structure== | ==Primary Structure== | ||
Sequence | Sequence | ||
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Maybe some statistics? | Maybe some statistics? | ||
Current revision
Contents |
RNA
Introduction
-single stranded polynucleic acid
-Transcribed from DNA by family of RNA polymerases
-Functional roles include functional transfer for protein synthesis, catalysis, cellular regulation
-Degraded by....
Products of Transcription
Names/functional roles
Post/Co-transcriptional modifications
Degradation pathways
Structure General
Summary of - how to build a 3D structure from a linear medium. Practical considerations. How to think about folded polymers.
Backbone
Ribose
Bases + base pairing
Forces: stacking (VDW), hydrogen bond, hydrophobic effect, electrostatic
Primary Structure
Sequence
Maybe some statistics?
Structure (building blocks)
Stem loop
Coaxial helices
Kink-turn
Hook-turn
Ribose zipper
Kissing loops
Hairpin loops
Pseudoknots
A-minor interactions
A-major interactions
Tetraloop-receptor motifs
T-loop motif
Triple stranded RNA
RNA quadruplex structuers
Metal chelation
