Gp120
From Proteopedia
(Difference between revisions)
Line 19: | Line 19: | ||
{{#tree:id=OrganizedByTopic|openlevels=0| | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
- | *Gp120 from HIV | + | *Gp120 from HIV-1 |
**[[3dnl]], [[3dnn]], [[3dno]], [[3tgq]], [[3tgr]], [[3tgt]], [[3tih]] - Gp120 core<br /> | **[[3dnl]], [[3dnn]], [[3dno]], [[3tgq]], [[3tgr]], [[3tgt]], [[3tih]] - Gp120 core<br /> | ||
**[[1meq]] – GP120 C5 domain – NMR<br /> | **[[1meq]] – GP120 C5 domain – NMR<br /> | ||
**[[1niz]], [[1nj0]], [[2esx]], [[2esz]], [[1u6u]], [[1u6v]] - GP120 V3 loop – NMR<br /> | **[[1niz]], [[1nj0]], [[2esx]], [[2esz]], [[1u6u]], [[1u6v]] - GP120 V3 loop – NMR<br /> | ||
- | **[[4jpj]] - Gp120 outer domain<br /> | + | **[[4jpj]], [[5idl]] - Gp120 outer domain<br /> |
+ | **[[5fa2]] - Gp120 core (mutant)<br /> | ||
+ | **[[5f4u]] - Gp120 Clade C <br /> | ||
*Gp120 binary complex | *Gp120 binary complex | ||
- | **[[3idx]], [[3idy]], [[2ny7]]. [[4jdt]] - Gp120 core (mutant) + antibody <br /> | + | **[[3idx]], [[3idy]], [[2ny7]]. [[4jdt]], [[5fyl]], [[5fec]] - Gp120 core (mutant) + antibody <br /> |
- | **[[3se8]], [[3se9]], [[3hi1]], [[3rjq]], [[4jkp]], [[4jm2]], [[4lss]], [[4lsv]] - Gp120 + antibody<br /> | + | **[[3se8]], [[3se9]], [[3hi1]], [[3rjq]], [[4jkp]], [[4jm2]], [[4lss]], [[4lsv]], [[4ywg]], [[4xvs]] - Gp120 + antibody<br /> |
+ | **[[4rz8]] - Gp120 core + CD4 mimic <br / | ||
**[[3ngb]] - Gp120 + antibody VRC01<br /> | **[[3ngb]] - Gp120 + antibody VRC01<br /> | ||
- | **[[4i3r]], [[4i3s]] - Gp120 outer domain + antibody VRC- | + | **[[4i3r]], [[4i3s]], [[5kzc]], [[5if0]], [[5ies]] - Gp120 outer domain + antibody VRC<br /> |
- | **[[4jan]], [[4lst]] - Gp120 Clade C + antibody <br /> | + | **[[4ye4]], [[4rwy]] - Gp120 Clade B + antibody <br /> |
- | **[[4jb9]], [[4lsp]], [[4lsq]], [[4lsr]], [[4lsu]] - Gp120 Clade A/E + antibody <br /> | + | **[[4jan]], [[4lst]], [[5te7]], [[5f6j]] - Gp120 Clade C + antibody <br /> |
- | **[[4jpj]] - Gp120 Clade A + antibody <br /> | + | **[[5f4l]], [[5f4p]], [[5f4r]] - Gp120 Clade C + CD4 mimic <br /> |
+ | **[[4jb9]], [[4lsp]], [[4lsq]], [[4lsr]], [[4lsu]], [[5te6]], [[5fcu]], [[5f9w]], [[5f9o]], [[5f96]], [[5cd5]], [[4xvt]] - Gp120 Clade A/E + antibody <br /> | ||
+ | **[[4yc2]], [[4ybl]], [[4s1s]], [[4s1r]], [[4s1q]] - Gp120 Clade A/E (mutant) + antibody <br /> | ||
+ | **[[4jpj]], [[4rx4]] - Gp120 Clade A + antibody <br /> | ||
**[[4jpw]] - Gp120 Clade A (mutant) + antibody <br /> | **[[4jpw]] - Gp120 Clade A (mutant) + antibody <br /> | ||
+ | **[[5te4]] - Gp120 Clade G + antibody <br /> | ||
+ | **[[5t33]] - Gp120 RHPA + antibody <br /> | ||
**[[3u2s]] - Gp120 V1V2 region + antibody PG9<br /> | **[[3u2s]] - Gp120 V1V2 region + antibody PG9<br /> | ||
**[[3tgs]], [[4dko]], [[4dkp]], [[4dkq]], [[4dkr]] - Gp120 core + piperidine derivative<br /> | **[[3tgs]], [[4dko]], [[4dkp]], [[4dkq]], [[4dkr]] - Gp120 core + piperidine derivative<br /> | ||
Line 45: | Line 53: | ||
**[[2nxy]], [[2nxz]], [[2ny0]], [[2ny1]], [[2ny2]], [[2ny3]], [[2ny4]], [[2ny5]], [[2ny6]], [[1gc1]], [[1g9m]], [[1g9n]], [[1rzj]], [[1rzk]], [[1yyl]], [[1yym]], [[2b4c]] - Gp120 core (mutant) + hCD4 N terminal + antibody <br /> | **[[2nxy]], [[2nxz]], [[2ny0]], [[2ny1]], [[2ny2]], [[2ny3]], [[2ny4]], [[2ny5]], [[2ny6]], [[1gc1]], [[1g9m]], [[1g9n]], [[1rzj]], [[1rzk]], [[1yyl]], [[1yym]], [[2b4c]] - Gp120 core (mutant) + hCD4 N terminal + antibody <br /> | ||
**[[3jwd]], [[3jwo]], [[2i5y]], [[2i60]] - Gp120 core + hCD4 N terminal + antibody <br /> | **[[3jwd]], [[3jwo]], [[2i5y]], [[2i60]] - Gp120 core + hCD4 N terminal + antibody <br /> | ||
+ | **[[5a8h]], [[5a7x]], [[4rqs]], [[4r4h]], [[4r2g]], [[4p9h]] - Gp120 core + hCD4 D1-D2 domain + antibody<br /> | ||
**[[4laj]] - Gp120 core + CD4 mimetic miniprotein + antibody<br /> | **[[4laj]] - Gp120 core + CD4 mimetic miniprotein + antibody<br /> | ||
**[[4r4f]], [[4r4n]] - Gp120 core + M48U1 peptide + antibody<br /> | **[[4r4f]], [[4r4n]] - Gp120 core + M48U1 peptide + antibody<br /> | ||
+ | **[[5kjr]] - Gp120 Clade A/E + M48U1 peptide + antibody<br /> | ||
+ | **[[4rfo]], [[4rfn]] - Gp120 Clade A/E (mutant) + M48U1 peptide + antibody<br /> | ||
+ | **[[5v8l]], [[5v8m]], [[5uty]], [[5utf]], [[5um8]], [[5jsa]], [[5js9]], [[5i8h]], [[5d9q]], [[5cjx]], [[5c7k]] - Gp120 + Gp41 + antibody<br /> | ||
+ | **[[5fyk]], [[5fyj]], [[4nco]] - Gp120 (mutant) + Gp41 + antibody<br /> | ||
+ | |||
+ | *Gp120 from HIV-2 binary complex | ||
+ | |||
+ | **[[5fec]] - Gp120 core (mutant) + CD4<br /> | ||
*Gp120 from SIV | *Gp120 from SIV |
Revision as of 09:24, 4 June 2017
|
3D structures of Gp120
Updated on 04-June-2017
References
- ↑ Poignard P, Saphire EO, Parren PW, Burton DR. gp120: Biologic aspects of structural features. Annu Rev Immunol. 2001;19:253-74. PMID:11244037 doi:http://dx.doi.org/10.1146/annurev.immunol.19.1.253
- ↑ Kassler K, Sticht H. Molecular mechanism of HIV-1 gp120 mutations that reduce CD4 binding affinity. J Biomol Struct Dyn. 2013 Jan 9. PMID:23297802 doi:10.1080/07391102.2012.746946