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Nucleoside diphosphate kinase
From Proteopedia
(Difference between revisions)
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**[[1leo]], [[1ncl]], [[1hlw]], [[1hhq]], [[1pae]], [[4c6a]] - DdNDK (mutant) <BR /> | **[[1leo]], [[1ncl]], [[1hlw]], [[1hhq]], [[1pae]], [[4c6a]] - DdNDK (mutant) <BR /> | ||
**[[2nck]] – MxNDK – ''Myxococcus xanthus''<BR /> | **[[2nck]] – MxNDK – ''Myxococcus xanthus''<BR /> | ||
| - | **[[1ndl]] – DmNDK – ''Drosophila melanogaster''<BR /> | + | **[[1ndl]], [[3wx8]] – DmNDK – ''Drosophila melanogaster''<BR /> |
**[[1nsq]] - DmNDK with phosphohistidine intermediate<BR /> | **[[1nsq]] - DmNDK with phosphohistidine intermediate<BR /> | ||
**[[1nsk]], [[1jxv]], [[3l7u]], [[4eno]] - hNDK A – human<BR /> | **[[1nsk]], [[1jxv]], [[3l7u]], [[4eno]] - hNDK A – human<BR /> | ||
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**[[3r9l]] - NDK – ''Giardia lamblia''<BR /> | **[[3r9l]] - NDK – ''Giardia lamblia''<BR /> | ||
**[[3ngr]], [[3ngs]] - LmNDK – ''Leishmania major''<BR /> | **[[3ngr]], [[3ngs]] - LmNDK – ''Leishmania major''<BR /> | ||
| + | **[[5c7p]], [[5caa]], [[5cab]] - LmNDK (mutant)<br /> | ||
| + | **[[4kpc]] - NDK – ''Leishmania braziliensis''<br /> | ||
| + | **[[5go1]] - NDK – ''Leishmania amazonensis''<br /> | ||
**[[3prv]] - NDK – ''Trypanosoma cruzi''<BR /> | **[[3prv]] - NDK – ''Trypanosoma cruzi''<BR /> | ||
**[[3q83]] - SaNDK – ''Staphylococcus aureus''<BR /> | **[[3q83]] - SaNDK – ''Staphylococcus aureus''<BR /> | ||
| Line 58: | Line 61: | ||
**[[3vvu]] - NDK – reconstructed bacterial ancestral<br /> | **[[3vvu]] - NDK – reconstructed bacterial ancestral<br /> | ||
**[[4f36]] – TbNDK – ''Trypanosoma brucei''<br /> | **[[4f36]] – TbNDK – ''Trypanosoma brucei''<br /> | ||
| + | **[[1vya]] – NDK – maize<br /> | ||
| + | **[[4s0m]], [[4w98]], [[4wbf]] – NDK – ''Acinetobacter baumannii''<br /> | ||
| + | **[[5iol]], [[5iom]] - SmNDK – ''Schisostoma mansoni''<br /> | ||
| + | **[[5u2i]] – NDK – ''Naegleria fowleri''<br /> | ||
| + | **[[5v6d]] – NDK – ''Neisseria gonnorrhoeae''<br /> | ||
*NDK complex with adenine derivative | *NDK complex with adenine derivative | ||
| Line 77: | Line 85: | ||
**[[4ek2]] - BtNDK + AMP derivative<br /> | **[[4ek2]] - BtNDK + AMP derivative<br /> | ||
**[[4hr2]] - BtNDK + ADP<br /> | **[[4hr2]] - BtNDK + ADP<br /> | ||
| + | **[[4uof]], [[4uoh]] - sNDK + ADP derivative – shrimp <br /> | ||
| + | **[[5kk8]] - SmNDK + ADP<br /> | ||
*NDK complex with thymidine derivative | *NDK complex with thymidine derivative | ||
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**[[3q89]] - SaNDK + CDP<BR /> | **[[3q89]] - SaNDK + CDP<BR /> | ||
**[[4fkx]] - TbNDK + CDP<br /> | **[[4fkx]] - TbNDK + CDP<br /> | ||
| + | **[[4uog]] - sNDK + CDP derivative <br /> | ||
*NDK complex with guanine derivative | *NDK complex with guanine derivative | ||
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**[[3fbe]], [[3dkd]], [[3ejm]] - ApNDK (mutant) + GDP<BR /> | **[[3fbe]], [[3dkd]], [[3ejm]] - ApNDK (mutant) + GDP<BR /> | ||
**[[3emt]], [[3ena]] - ApNDK (mutant) + GDP derivative<br /> | **[[3emt]], [[3ena]] - ApNDK (mutant) + GDP derivative<br /> | ||
| - | **[[3q86]] - SaNDK + GTP | + | **[[3q86]] - SaNDK + GTP<br /> |
| + | [[4fky]] - TbNDK + GTP<br /> | ||
*NDK complex with uridine derivative | *NDK complex with uridine derivative | ||
| Line 124: | Line 136: | ||
*NDK complex with antiviral drug | *NDK complex with antiviral drug | ||
| - | **[[1mn9]], [[3fkb]] - DdNDK (mutant) + antiviral drug | + | **[[1mn9]], [[3fkb]] - DdNDK (mutant) + antiviral drug<br /> |
| + | **[[4cp5]] - DdNDK (mutant) + PMPAPP<br /> | ||
}} | }} | ||
== References == | == References == | ||
<references/> | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 09:57, 28 August 2017
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3D structures of nucleoside diphosphate kinase
Updated on 28-August-2017
4fky - TbNDK + GTP
References
- ↑ Janin J, Dumas C, Morera S, Xu Y, Meyer P, Chiadmi M, Cherfils J. Three-dimensional structure of nucleoside diphosphate kinase. J Bioenerg Biomembr. 2000 Jun;32(3):215-25. PMID:11768305
- ↑ Qiu Y, Zhao D, Butenschon VM, Bauer AT, Schneider SW, Skolnik EY, Hammes HP, Wieland T, Feng Y. Nucleoside diphosphate kinase B deficiency causes a diabetes-like vascular pathology via up-regulation of endothelial angiopoietin-2 in the retina. Acta Diabetol. 2016 Feb;53(1):81-9. doi: 10.1007/s00592-015-0752-x. Epub 2015 Apr, 23. PMID:25900369 doi:http://dx.doi.org/10.1007/s00592-015-0752-x
- ↑ Chen Y, Gallois-Montbrun S, Schneider B, Veron M, Morera S, Deville-Bonne D, Janin J. Nucleotide binding to nucleoside diphosphate kinases: X-ray structure of human NDPK-A in complex with ADP and comparison to protein kinases. J Mol Biol. 2003 Sep 26;332(4):915-26. PMID:12972261
