This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


ATPase

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (fixes hiding a bunch of text by mistake by adding ending comment)
Line 105: Line 105:
**[[5ik2]], [[5hkk]] – F1-ATPS – ''Cakdalkalibacillus thermarum''<br />
**[[5ik2]], [[5hkk]] – F1-ATPS – ''Cakdalkalibacillus thermarum''<br />
-
*''F1F0 ATPase α, β, γ, δ, ε subunits''
+
''F1F0 ATPase α, β, γ, δ, ε subunits''
-
**[[4asu]], [[2jdi]], [[2jj1]], [[2jj2]] - bF1-ATPS<br />
+
[[4asu]], [[2jdi]], [[2jj1]], [[2jj2]] - bF1-ATPS<br />
-
**[[2v7q]], [[1e79]], [[2ck3]] - bF1-ATPS+inhibitor<br />
+
[[2v7q]], [[1e79]], [[2ck3]] - bF1-ATPS+inhibitor<br />
**[[4yxw]] - bF1-ATPS+ ANP<br />
**[[4yxw]] - bF1-ATPS+ ANP<br />
-
**[[2xnd]], [[2xok]] - bF1-ATPS+ATPS lipid-binding protein<br />
+
[[2xnd]], [[2xok]] - bF1-ATPS+ATPS lipid-binding protein<br />
-
**[[2wpd]], [[2wss]] - yF1-ATPS+subunit 9+Mg+ADP+ATP - yeast<br />
+
[[2wpd]], [[2wss]] - yF1-ATPS+subunit 9+Mg+ADP+ATP - yeast<br />
-
**[[3oe7]], [[3oee]], [[3oeh]], [[3ofn]] - yF1-ATPS (mutant)<br />
+
[[3oe7]], [[3oee]], [[3oeh]], [[3ofn]] - yF1-ATPS (mutant)<br />
-
**[[3fks]], [[3zry]], [[2hld]] - yF1-ATPS<br />
+
[[3fks]], [[3zry]], [[2hld]] - yF1-ATPS<br />
**[[3zia]] - yF1-ATPS + inhibitor protein<br />
**[[3zia]] - yF1-ATPS + inhibitor protein<br />
-
**[[3j0j]] – TtATPS α,β,γ,δ,ε,ζ - Cryo EM<br />
+
**[[6f5d]] - F1-ATPS + ribonucleoprotein P18 – Trypanosoma brucei<br />
-
**[[1e79]] - bF1-ATPS<br />
+
[[3j0j]] – TtATPS α,β,γ,δ,ε,ζ - Cryo EM<br />
-
*''F1F0 ATPase α,β,γ,δ,ε,9,B,D,6,O subunits''
+
''F1F0 ATPase α, β, γ, ε subunits''
-
**[[4b2q]] – yATPase subunits α,β,γ,δ,ε +9,B,D,6,O – Cryo EM
+
[[3oaa]] – EcF1-ATPS (mutant)<br />
 +
[[1e79]] - bF1-ATPS<br />
 +
 
 +
''F1F0 ATPase α,β,γ,δ,ε,9,B,D,6,O subunits''
 +
 
 +
[[4b2q]] – yATPase – Cryo EM
*''F1F0 ATPase α,β,γ,δ,ε,A,C subunits''
*''F1F0 ATPase α,β,γ,δ,ε,A,C subunits''
Line 132: Line 137:
*''F1F0 ATPase α,β,γ,δ,ε,A,B,C,D,F,H,AAP1 subunits''
*''F1F0 ATPase α,β,γ,δ,ε,A,B,C,D,F,H,AAP1 subunits''
-
**[[5lqz]], [[5lqy]], [[5lqx]] – ATPase + ATPase inhibitor protein – ''Ogataea angusta'' - Cryo EM<br />
+
**[[5lqz]], [[5lqy]], [[5lqx]] – ATPase + ATPase inhibitor protein – Ogataea angusta - Cryo EM<br />
*''F1F0 ATPase α,β,γ,δ,ε,B1,C1,D,O subunits''
*''F1F0 ATPase α,β,γ,δ,ε,B1,C1,D,O subunits''
Line 138: Line 143:
**[[5fil]], [[5fik]], [[5fij]], [[5ari]], [[5arh]], [[5are]], [[5ara]] – bATPase – Cryo EM<br />
**[[5fil]], [[5fik]], [[5fij]], [[5ari]], [[5arh]], [[5are]], [[5ara]] – bATPase – Cryo EM<br />
 +
*''F1F0 ATPase A,B,C,D,E,F,G,J,K subunits''
-
**[[1bmf]] - bF1-ATPS<br />
+
**[[6b2z]] – yATPase – Cryo EM<br />
-
**[[3dze]] – bF1-ATPS subunit S<br />
+
-
**[[1cow]] - bF1-ATPS+aurovertin B<br />
+
-
**[[4f4s]] – yATPase subunit 9 + oligomycin <br />
+
-
*'''V-ATPase'''
+
*''F1F0 ATPase α,β,γ,δ,ε,A,D,E,F,G,J,K,H,4,5,8,9 subunits''
-
*''V-ATPase subunit A''
+
**[[6b8h]] – yATPase<br />
-
**[[3i4l]] - PhATPS subunit A+AMPPNP<br />
+
[[1bmf]] - bF1-ATPS<br />
-
**[[3mfy]], [[3m4y]], [[3nd8]], [[3nd9]], [[3p20]], [[3qg1]], [[3qia]], [[3qjy]], [[3sdz]], [[3se0]] - PhATPS subunit A (mutant)<br />
+
[[3dze]] – bF1-ATPS subunit S<br />
-
**[[3i72]], [[3i73]], [[3ikj]] - TtATPS subunit A (mutant)<br />
+
[[1cow]] - bF1-ATPS+aurovertin B<br />
-
**[[4o1s]] - ATPS subunit A – ''Thermoplasma volcanium''<br />
+
[[4f4s]] – yATPase subunit 9 + oligomycin <br />
 +
 
 +
===V-ATPase===
 +
 
 +
''V-ATPase subunit A''
 +
 
 +
[[3i4l]] - PhATPS subunit A+AMPPNP<br />
 +
[[3mfy]], [[3m4y]], [[3nd8]], [[3nd9]], [[3p20]], [[3qg1]], [[3qia]], [[3qjy]], [[3sdz]], [[3se0]], [[5x09]] - PhATPS subunit A
 +
(mutant)<br />
 +
[[3i72]], [[3i73]], [[3ikj]] - TtATPS subunit A (mutant)<br />
 +
**[[4o1s]] - ATPS subunit A – Thermoplasma volcanium<br />
**[[5i1m]] – yATPase <br />
**[[5i1m]] – yATPase <br />
-
**[[5bn5]] – NeATPase + NEQ263 – ''Nanoarchaeum equitans'' <br />
+
**[[5bn5]] – NeATPase + NEQ263 – Nanoarchaeum equitans <br />
**[[5bn4]] – NeATPase + NEQ263 + ANP <br />
**[[5bn4]] – NeATPase + NEQ263 + ANP <br />
**[[5bn3]] – NeATPase + NEQ263 + ADP <br />
**[[5bn3]] – NeATPase + NEQ263 + ADP <br />
-
*''V-ATPase subunit B''
+
''V-ATPase subunit B''
-
**[[2c61]] - MmATPS subunit B – ''Methanosarcina mazei''<br />
+
[[2c61]] - MmATPS subunit B – ''Methanosarcina mazei''<br />
-
**[[2rkw]], [[3b2q]], [[3ssa]], [[3tgw]], [[3tiv]] - MmATPS subunit B (mutant)<br />
+
[[2rkw]], [[3b2q]], [[3ssa]], [[3tgw]], [[3tiv]] - MmATPS subunit B (mutant)<br />
-
**[[3dsr]] - MmATPS subunit B+ADP<br />
+
[[3dsr]] - MmATPS subunit B+ADP<br />
-
**[[3eiu]] - MmATPS subunit B+ATP<br />
+
[[3eiu]] - MmATPS subunit B+ATP<br />
-
*''V-ATPase subunit C''
+
''V-ATPase subunit C''
-
**[[1u7l]], [[3u2f]], [[3u2y]], [[3u32]], [[3ud0]] - yATPS subunit C<br />
+
[[1u7l]], [[3u2f]], [[3u2y]], [[3u32]], [[3ud0]] - yATPS subunit C<br />
-
**[[3v3c]] - ATPS subunit C - pea<br />
+
[[3v3c]] - ATPS subunit C - pea<br />
-
**[[1ijp]], [[1l6t]] – EcF1-ATPS subunit C (mutant) – ''Escherichia coli'' - NMR<br />
+
[[1ijp]], [[1l6t]] – EcF1-ATPS subunit C (mutant) – ''Escherichia coli'' - NMR<br />
-
**[[1r5z]], [[1v9m]] - TtATPS subunit C – ''Thermus thermophilus''<br />
+
[[1r5z]], [[1v9m]] - TtATPS subunit C – ''Thermus thermophilus''<br />
-
**[[3lg8]] - MtATPS subunit C C-terminal<br />
+
[[3lg8]] - MtATPS subunit C C-terminal<br />
-
**[[2w5j]] - sATPS subunit C - spinach<br />
+
[[2w5j]] - sATPS subunit C - spinach<br />
-
**[[2wie]], [[2xqs]], [[2xqt]], [[2xqu]] - ATPS subunit C – ''Arthrospira platensis''<br />
+
[[2wie]], [[2xqs]], [[2xqt]], [[2xqu]] - ATPS subunit C – Arthrospira platensis<br />
-
**[[3zk1]], [[3zk2]] - ATPS subunit C – ''Fusobacterium nucleatum''<br />
+
[[3zk1]], [[3zk2]] - ATPS subunit C – Fusobacterium nucleatum<br />
-
*''V-ATPase subunit D+F''
+
''V-ATPase subunit D+F''
**[[4rnd]] – yATPase subunit D+F<br />
**[[4rnd]] – yATPase subunit D+F<br />
-
*''V-ATPase subunit E''
+
''V-ATPase subunit E''
-
**[[2kz9]] – yATPase subunit E<br />
+
[[2kz9]] – yATPase subunit E<br />
-
**[[2dm9]], [[2dma]], [[4dt0]] - PhATPS subunit E – ''Pyrococcus horikoshii''<br />
+
[[2dm9]], [[2dma]], [[4dt0]] - PhATPS subunit E – ''Pyrococcus horikoshii''<br />
-
**[[2kk7]] - MjATPS subunit E – ''Methanocaldococcus jannaschii''<br />
+
[[2kk7]] - MjATPS subunit E – ''Methanocaldococcus jannaschii''<br />
-
**[[3v6i]] – TtATPS subunit E + VAPC<br />
+
[[3v6i]] – TtATPS subunit E + VAPC<br />
-
*''V-ATPase subunit F''
+
''V-ATPase subunit F''
-
**[[2qai]] - ATPS subunit F – ''Pyrococcus furiosus''<br />
+
[[2qai]] - ATPS subunit F – ''Pyrococcus furiosus''<br />
-
**[[2i4r]] - ATPS subunit F – ''Archaeoglobus fulgidus''<br />
+
[[2i4r]] - ATPS subunit F – ''Archaeoglobus fulgidus''<br />
-
**[[2ov6]] - MmATPS subunit F - NMR<br />
+
[[2ov6]] - MmATPS subunit F - NMR<br />
-
**[[2d00]] - TtATPS subunit F <br />
+
[[2d00]] - TtATPS subunit F <br />
-
**[[4ix9]] – yATP subunit F (mutant)<br />
+
[[4ix9]] – yATP subunit F (mutant)<br />
-
*''V-ATPase subunit G''
+
''V-ATPase subunit G''
-
**[[2k88]] - yATPS subunit G residues 2-58 - NMR<br />
+
[[2k88]] - yATPS subunit G residues 2-58 - NMR<br />
**[[2kwy]] - yATPS subunit G residues 61-101 - NMR<br />
**[[2kwy]] - yATPS subunit G residues 61-101 - NMR<br />
-
*''V-ATPase subunit H''
+
''V-ATPase subunit H''
-
**[[1ho8]] – yATPS subunit H <br />
+
[[1ho8]] – yATPS subunit H <br />
-
*''V-ATPase subunit K''
+
''V-ATPase subunit K''
-
**[[2bl2]], [[2cyd]] - EhATPS subunit K – ''Enterococcus hirae''<br />
+
[[2bl2]], [[2cyd]] - EhATPS subunit K – ''Enterococcus hirae''<br />
-
*''V-ATPase subunit I''
+
''V-ATPase subunit I''
-
**[[3rrk]] – ATPS subunit I N terminal – ''Meiothermus ruber''
+
[[3rrk]] – ATPS subunit I N terminal – ''Meiothermus ruber''
*''V-ATPase multi subunits''
*''V-ATPase multi subunits''
-
**[[4dl0]], [[4efa]] - yATPase subunits C,G,E<br />
+
[[4dl0]], [[4efa]] - yATPase subunits C,G,E<br />
-
**[[3w3a]] - yATPS subunit A,B,D,F<br />
+
[[3w3a]] - yATPS subunit A,B,D,F<br />
**[[5tj5]] - yATPS subunit A,C,C’,C’’,D,E,F<br />
**[[5tj5]] - yATPS subunit A,C,C’,C’’,D,E,F<br />
 +
**[[5voz]], [[5voy]], [[5vox]] - yATPS subunit A,C,C’,C’’,D,E,F,H – Cryo EM<br />
 +
**[[6c6l]] - yATPS subunit A,C,C’,C’’,D,E,F + V0 assembly protein 1<br />
**[[5bw9]] - yATPS subunit A,B,D,E,G,H – Cryo EM<br />
**[[5bw9]] - yATPS subunit A,B,D,E,G,H – Cryo EM<br />
**[[5d80]] - yATPS subunit A,B,D,E,F,G,H<br />
**[[5d80]] - yATPS subunit A,B,D,E,F,G,H<br />
-
**[[3a5c]], [[3a5d]] - TtATPS subunit A,B,D,F<br />
+
[[3a5c]], [[3a5d]] - TtATPS subunit A,B,D,F<br />
**[[5tsj]] - TtATPS subunit A,B,C,D,E,F,G + antibody - Cryo-EM<br />
**[[5tsj]] - TtATPS subunit A,B,C,D,E,F,G + antibody - Cryo-EM<br />
**[[5gas]], [[5gar]] - TtATPS subunit A,B,C,D,E,F,G,I - Cryo-EM<br />
**[[5gas]], [[5gar]] - TtATPS subunit A,B,C,D,E,F,G,I - Cryo-EM<br />
-
**[[3gqb]] - TtATPS subunit A (mutant),B (mutant)<br />
+
**[[5y60]]. [[5y5z]], [[5y5y]], [[5y5x]] - TtATPS subunit A,B,C,D,E,F,I,K - Cryo-EM<br />
-
**[[3k5b]] - TtATPS subunit E (mutant)+C<br />
+
[[3gqb]] - TtATPS subunit A (mutant),B (mutant)<br />
 +
[[3k5b]] - TtATPS subunit E (mutant)+C<br />
**[[5knd]], [[5knc]], [[5knb]] - EhATPS subunit A,B,D,F<br />
**[[5knd]], [[5knc]], [[5knb]] - EhATPS subunit A,B,D,F<br />
-
*'''P-ATPase'''
+
===P-ATPase===
-
*''Cu transporting ATPase''
+
''Cu+2 transporting ATPase''
-
**[[2kmv]], [[2kmx]], [[2arf]], [[2koy]] – hATPase NBD – human – NMR<br />
+
[[2kmv]], [[2kmx]], [[2arf]], [[2koy]] – hATPase NBD – human – NMR<br />
-
**[[2kij]] - hATPase actuator domain – NMR<br />
+
[[2kij]] - hATPase actuator domain – NMR<br />
-
**[[1yjr]], [[1yjt]], [[1yju]], [[1yjv]] - hATPase (mutant) 6th soluble domain – NMR<br />
+
[[1yjr]], [[1yjt]], [[1yju]], [[1yjv]] - hATPase (mutant) 6th soluble domain – NMR<br />
-
**[[1y3j]], [[1y3k]] - hATPase 5th soluble domain – NMR<br />
+
[[1y3j]], [[1y3k]] - hATPase 5th soluble domain – NMR<br />
**[[2ew9]] - hATPase 5th+6th soluble domains – NMR<br />
**[[2ew9]] - hATPase 5th+6th soluble domains – NMR<br />
-
**[[1s6o]], [[1s6u]], [[2lqb]] - hATPase 2nd soluble domain – NMR<br />
+
[[1s6o]], [[1s6u]], [[2lqb]] - hATPase 2nd soluble domain – NMR<br />
-
**[[1q8l]] - hATPase 2nd MBD – NMR<br />
+
[[1q8l]] - hATPase 2nd MBD – NMR<br />
-
**[[1aw0]], [[2aw0]] - hATPase 4th MBD – NMR<br />
+
[[1aw0]], [[2aw0]] - hATPase 4th MBD – NMR<br />
-
**[[1kvi]], [[1kvj]] - hATPase 1st MBD – NMR<br />
+
[[1kvi]], [[1kvj]] - hATPase 1st MBD – NMR<br />
**[[5t7l]] - hATPase 1st MBD + Cu transport protein<br />
**[[5t7l]] - hATPase 1st MBD + Cu transport protein<br />
-
**[[3dxs]] - AtATPase MBD – ''Arabidopsis thaliana''<br />
+
[[3dxs]] - AtATPase RAN1 MBD (mutant) – ''Arabidopsis thaliana''<br />
-
**[[3voy]] - AfATPase – Archaeoglobus fulgidus – CryoEM<br />
+
**[[5lbd]] – AtATPase PAA1 N-domain<br />
-
**[[3skx]], [[3sky]] - AfATPase NBD<br />
+
**[[5lbk]] – AtATPase PAA2 N-domain<br />
-
**[[2k1r]] - hATPase MBD+ ATOX1 – NMR<br />
+
[[3voy]] - AfATPase – Archaeoglobus fulgidus – CryoEM<br />
-
**[[2rop]], [[2g9o]], [[2ga7]] - hATPase MBD – NMR<br />
+
[[3skx]], [[3sky]] - AfATPase NBD<br />
-
**[[2rml]] - BsATPase N-terminal – ''Bacillus subtilis'' – NMR<br />
+
[[2k1r]] - hATPase MBD+ ATOX1 – NMR<br />
-
**[[2gcf]] - sATPase N-terminal - ''Synechocystis'' – NMR<br />
+
[[2rop]], [[2g9o]], [[2ga7]] - hATPase MBD – NMR<br />
 +
[[2rml]] - BsATPase N-terminal – ''Bacillus subtilis'' – NMR<br />
 +
[[2gcf]] - sATPase N-terminal - Synechocystis – NMR<br />
**[[4a4j]] - sATPase N-terminal <br />
**[[4a4j]] - sATPase N-terminal <br />
-
**[[4a48]] - sATPase<br />
+
[[4a48]] - sATPase<br />
-
**[[2iye]] - SsATPase catalytic domain – ''Sulfolobus solfataricus''<br />
+
[[2iye]] - SsATPase catalytic domain – ''Sulfolobus solfataricus''<br />
-
**[[2yj3]] - SsATPase catalytic domain (mutant)<br />
+
[[2yj3]] - SsATPase catalytic domain (mutant)<br />
-
**[[2yj4]], [[2yj5]], [[2yj6]] - SsATPase catalytic domain (mutant) + nucleotide<br />
+
[[2yj4]], [[2yj5]], [[2yj6]] - SsATPase catalytic domain (mutant) + nucleotide<br />
-
**[[1fvq]], [[1fvs]] - hATPase – NMR<br />
+
[[1fvq]], [[1fvs]] - hATPase – NMR<br />
-
**[[3cjk]] – hATPase + Cu transporting protein ATX1<br />
+
[[3cjk]] – hATPase + Cu transporting protein ATX1<br />
-
**[[3rfu]], [[4bbj]], [[4bev]], [[4byg]] – ATPase – ''Legionella pneumophila''<br />
+
[[3rfu]], [[4bbj]], [[4bev]], [[4byg]] – LpATPase – ''Legionella pneumophila''<br />
-
**[[4f2f]] - ATPase metal-binding domain – ''Streptococcus pneumonia''<br />
+
[[4f2f]] - ATPase metal-binding domain – ''Streptococcus pneumonia''<br />
-
**[[3j08]], [[3j09]] - AfATPase<br />
+
[[3j08]], [[3j09]] - AfATPase<br />
-
**[[3a1c]] – AfATPase + AMPPCP<br />
+
[[3a1c]] – AfATPase + AMPPCP<br />
-
**[[3a1d]] - AfATPase + ADP-Mg<br / >
+
[[3a1d]] - AfATPase + ADP-Mg<br / >
-
**[[3a1e]] - AfATPase (mutant) + AMPPCP<br />
+
[[3a1e]] - AfATPase (mutant) + AMPPCP<br />
-
*''Na/K transporting ATPase''
+
''Na/K transporting ATPase''
-
**[[3a3y]] - SaATPase+K+ouabain – ''Squalus acanthias''<br />
+
[[3a3y]] - SaATPase+K+ouabain – ''Squalus acanthias''<br />
-
**[[3kdp]], [[3b8e]] – pATPase – pig <br />
+
[[3kdp]], [[3b8e]] – pATPase – pig <br />
-
**[[3n23]] – pATPase + ouabain<br />
+
[[3n23]] – pATPase + ouabain<br />
**[[3wgv]], [[3wgu]] – pATPase + oligomycin<br />
**[[3wgv]], [[3wgu]] – pATPase + oligomycin<br />
-
**[[3b8e]] - pATPase a+BeF3 <br />
+
[[3b8e]] - pATPase a+BeF3 <br />
-
**[[2hc8]] –AfATPase CopA A domain<br />
+
[[2hc8]] –AfATPase CopA A domain<br />
-
**[[2b8e]] - AfATPase CopA NBD<br />
+
[[2b8e]] - AfATPase CopA NBD<br />
-
**[[2xze]] - SaATPase<br />
+
[[2xze]] - SaATPase<br />
**[[5aw9]], [[5aw8]], [[5aw7]], [[5aw6]], [[5aw5]], [[5aw4]], [[5aw3]], [[5aw2]], [[5aw1]], [[5aw0]], [[5avz]], [[5avy]], [[5avx]], [[5avw]], [[5avv]], [[5avu]], [[5avt]], [[5avs]], [[5avr]], [[5avq]] – SaATPase + phospholemman-like protein<br />
**[[5aw9]], [[5aw8]], [[5aw7]], [[5aw6]], [[5aw5]], [[5aw4]], [[5aw3]], [[5aw2]], [[5aw1]], [[5aw0]], [[5avz]], [[5avy]], [[5avx]], [[5avw]], [[5avv]], [[5avu]], [[5avt]], [[5avs]], [[5avr]], [[5avq]] – SaATPase + phospholemman-like protein<br />
**[[4xe5]] - bATPase <br />
**[[4xe5]] - bATPase <br />
-
**[[1mo8]], [[1mo7]] - ATPase α-1 – rat<br />
+
[[1mo8]], [[1mo7]] - rATPase α-1 – rat<br />
-
**[[1q3i]] - pATPase NBD<br />
+
[[1q3i]] - pATPase NBD<br />
-
**[[4ret]], [[4res]], [[4hyt]], [[4hqj]] - pATPase subunits α,β,γ<br />
+
[[4ret]], [[4res]], [[4hyt]], [[4hqj]] - pATPase subunits α,β,γ<br />
-
**[[2zxe]] - ATPase subunits α,β + phospholemman-like protein – spiny dogfish
+
[[2zxe]] - ATPase subunits α,β + phospholemman-like protein – spiny dogfish
-
*''Ca+2 transporting ATPase''
+
''Ca+2 transporting ATPase''
-
**[[3fgo]] - rATPase+CPA+AMPPCP – rabbit<br />
+
[[3fgo]] - rATPase+CPA+AMPPCP – rabbit<br />
-
**[[3b9r]], [[1xp5]] - rATPase+AlF4<br />
+
[[3b9r]], [[1xp5]] - rATPase+AlF4<br />
-
**[[1wpg]] - rATPase+MgF4<br />
+
[[1wpg]] - rATPase+MgF4<br />
-
**[[3w5b]] - rATPase+Mg<br />
+
[[3w5b]] - rATPase+Mg<br />
**[[4h1w]], [[3w5a]] - rATPase+ sarcolipin<br />
**[[4h1w]], [[3w5a]] - rATPase+ sarcolipin<br />
-
**[[3w5c]], [[3w5d]], [[1iwo]] - rATPase<br />
+
[[3w5c]], [[3w5d]], [[1iwo]] - rATPase<br />
**[[4bew]] - rATPase+ phosphate analog<br />
**[[4bew]] - rATPase+ phosphate analog<br />
-
**[[2zbe]], [[3b9b]] – rATPase+BeF3<br />
+
[[2zbe]], [[3b9b]] – rATPase+BeF3<br />
-
**[[2zbf]] - rATPase+BeF3+TG<br />
+
[[2zbf]] - rATPase+BeF3+TG<br />
-
**[[2zbg]] - rATPase+AlF4+TG<br />
+
[[2zbg]] - rATPase+AlF4+TG<br />
-
**[[2zbd]], [[3ar8]] - rATPase+AlF4+nucleotide+Ca<br />
+
[[2zbd]], [[3ar8]] - rATPase+AlF4+nucleotide+Ca<br />
-
**[[3ar9]] - rATPase+BeF3+nucleotide<br />
+
[[3ar9]] - rATPase+BeF3+nucleotide<br />
-
**[[2dqs]], [[3ar2]], [[1vfp]], [[4xou]] - rATPase+AMPPCP<br />
+
[[2dqs]], [[3ar2]], [[1vfp]], [[4xou]] - rATPase+AMPPCP<br />
**[[5a3r]] - rATPase + BeF3 + AMPPCP<br />
**[[5a3r]] - rATPase + BeF3 + AMPPCP<br />
-
**[[2c88]], [[2c8k]], [[3ar4]], [[3ar3]], [[3ar5]], [[3ar7]] - rATPase+nucleotide+TG<br />
+
[[2c88]], [[2c8k]], [[3ar4]], [[3ar3]], [[3ar5]], [[3ar7]] - rATPase+nucleotide+TG<br />
-
**[[2ear]], [[2c8l]] - rATPase+TG<br />
+
[[2ear]], [[2c8l]] - rATPase+TG<br />
-
**[[2agv]] - rATPase+TG+BHQ<br />
+
[[2agv]] - rATPase+TG+BHQ<br />
-
**[[4ycl]] - rATPase+CPA<br />
+
[[4ycl]] - rATPase+CPA<br />
-
**[[2eat]] - rATPase+CPA+GT<br />
+
[[2eat]] - rATPase+CPA+GT<br />
-
**[[3ar6]] - rATPase+TNP-ADP+GT<br />
+
[[3ar6]] - rATPase+TNP-ADP+GT<br />
-
**[[2eau]] - rATPase+CPA+curcumin<br />
+
[[2eau]] - rATPase+CPA+curcumin<br />
-
**[[3ba6]] - rATPase phosphoenzyme intermediate<br />
+
[[3ba6]] - rATPase phosphoenzyme intermediate<br />
-
**[[3fpb]] - rATPase+ATP+cyclopiazonic acid<br />
+
[[3fpb]] - rATPase+ATP+cyclopiazonic acid<br />
-
**[[3fps]], [[2oa0]] - rATPase+ADP+cyclopiazonic acid<br />
+
[[3fps]], [[2oa0]] - rATPase+ADP+cyclopiazonic acid<br />
-
**[[2o9j]] - rATPase+MgF4+cyclopiazonic acid<br />
+
[[2o9j]] - rATPase+MgF4+cyclopiazonic acid<br />
-
**[[1kju]], [[3n5k]] - rATPase E2 state<br />
+
[[1kju]], [[3n5k]] - rATPase E2 state<br />
-
**[[2c9m]] - rATPase Ca2E1 state<br />
+
[[2c9m]] - rATPase Ca2E1 state<br />
-
**[[1t5s]], [[3n8g]] - rATPase Ca2E1 state+AMPPCP<br />
+
[[1t5s]], [[3n8g]] - rATPase Ca2E1 state+AMPPCP<br />
**[[4nab]] - rATPase Ca2E1 state (mutant) +AMPPCP<br />
**[[4nab]] - rATPase Ca2E1 state (mutant) +AMPPCP<br />
-
**[[1t5t]] - rATPase Ca2E1 state+ADP+AlF4<br />
+
[[1t5t]] - rATPase Ca2E1 state+ADP+AlF4<br />
-
**[[1su4]] - rATPase +2Ca2<br />
+
[[1su4]] - rATPase +2Ca2<br />
-
**[[2by4]], [[2yfy]], [[3nal]], [[3nam]], [[3nan]], [[4uu1]], [[4uu0]], [[4j2t]], [[5a3s]] - rATPase HNE2 state+thapsigargin derivative<br />
+
[[2by4]], [[2yfy]], [[3nal]], [[3nam]], [[3nan]], [[4uu1]], [[4uu0]], [[4j2t]], [[5a3s]] - rATPase HNE2 state+thapsigargin derivative<br />
**[[5a3q]] - rATPase + thapsigargin derivative + AMPPCP<br />
**[[5a3q]] - rATPase + thapsigargin derivative + AMPPCP<br />
**[[4ycn]], [[4ycm]] - rATPase + macrolide<br />
**[[4ycn]], [[4ycm]] - rATPase + macrolide<br />
**[[4y3u]] - rATPase + phospholamban<br />
**[[4y3u]] - rATPase + phospholamban<br />
-
*''Zn+2 transporting ATPase''
+
''Zn+2 transporting ATPase''
-
**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR<br />
+
[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR
-
**[[4umw]], [[4umv]] - ATPase +Mg – ''Shigella sonni''<br />
+
**[[4umw]], [[4umv]] - ATPase +Mg – Shigella sonni<br />
-
*''K+ transporting ATPase''
+
''K+ transporting ATPase''
-
**[[2a00]], [[2a29]] - EcATPase NBD of KdpB+AMPPNP– ''Escherichia coli'' – NMR<br />
+
[[2a00]], [[2a29]] - EcATPase NBD of KdpB+AMPPNP– ''Escherichia coli'' – NMR<br />
-
**[[1svj]], [[1u7q]] - EcATPase NBD of KdpB – NMR<br />
+
[[1svj]], [[1u7q]] - EcATPase NBD of KdpB – NMR<br />
-
**[[2ynr]], [[4ux2]], [[4ux1]] – pATPase – Cryo EM
+
[[2ynr]], [[4ux2]], [[4ux1]], [[5y0b]] – pATPase – Cryo EM
-
*''As+ transporting ATPase''
+
''As+ transporting ATPase''
-
**[[1ii0]], [[1f48]] - EcATPase<br />
+
[[1ii0]], [[1f48]] - EcATPase<br />
-
**[[1ihu]] – EcATPase+Mg+ADP+AlF3<br />
+
[[1ihu]] – EcATPase+Mg+ADP+AlF3<br />
-
**[[1ii9]] - EcATPase<br />
+
[[1ii9]] - EcATPase<br />
-
**[[3h84]], [[3idq]], [[3a36]], [[3a37]] - yATPase GET3 <br />
+
[[3h84]], [[3idq]], [[3a36]], [[3a37]] - yATPase GET3 <br />
**[[4pwx]], [[5bwk]] - yATPase GET3 + golgi to ER traffic protein + ubiquitin-like protein <br />
**[[4pwx]], [[5bwk]] - yATPase GET3 + golgi to ER traffic protein + ubiquitin-like protein <br />
**[[5bw8]] - yATPase GET3 + golgi to ER traffic protein + ubiquitin-like protein + protein<br />
**[[5bw8]] - yATPase GET3 + golgi to ER traffic protein + ubiquitin-like protein + protein<br />
Line 337: Line 355:
**[[4xvu]] - yATPase GET3 + antibody + NYV1<br />
**[[4xvu]] - yATPase GET3 + antibody + NYV1<br />
**[[4xtr]] - yATPase GET3 + antibody + pep12p<br />
**[[4xtr]] - yATPase GET3 + antibody + pep12p<br />
-
**[[3sja]], [[3sjb]], [[3sjc]], [[3sjd]], [[3zs8]], [[3zs9]], [[3b2e]], [[3vlc]] - yATPase GET3 + GET1 cystolic domain<br />
+
[[3sja]], [[3sjb]], [[3sjc]], [[3sjd]], [[3zs8]], [[3zs9]], [[3b2e]], [[3vlc]] - yATPase GET3 + GET1 cystolic domain<br />
-
**[[3ibg]] - ATPase GET3 – ''Aspergillus fumigatus''
+
[[3ibg]] - ATPase GET3 – ''Aspergillus fumigatus''
-
*''H+ transporting ATPase''
+
''H+ transporting ATPase''
-
**[[5ksd]] - AtATPase C terminal truncated<br />
+
[[5ksd]] - AtATPase C terminal truncated<br />
-
**[[1mhs]] - ATPase – ''Neurospora crassa''<br />
+
[[1mhs]] - ATPase – ''Neurospora crassa''<br />
-
*''Na+ transporting ATPase''
+
''Na+ transporting ATPase''
-
**[[2db4]], [[3aou]] - EhATPase subunit K – ''Enterococcus hirae''<br />
+
[[2db4]], [[3aou]] - EhATPase subunit K – ''Enterococcus hirae''<br />
-
**[[3aon]] - EhATPase subunits D,G<br />
+
[[3aon]] - EhATPase subunits D,G<br />
-
**[[3vr2]] - EhATPase subunits A,B<br />
+
[[3vr2]] - EhATPase subunits A,B<br />
-
**[[3vr4]], [[3vr5]] - EhATPase subunits A,B,D,G<br />
+
[[3vr4]], [[3vr5]] - EhATPase subunits A,B,D,G<br />
-
**[[3vr3]] - EhATPase subunits A,B + AMPPNP<br />
+
[[3vr3]] - EhATPase subunits A,B + AMPPNP<br />
-
**[[3vr6]] - EhATPase subunits A,B,D,G + AMPPNP<br />
+
[[3vr6]] - EhATPase subunits A,B,D,G + AMPPNP<br />
-
**[[1yce]] - ATPase rotor ring – ''Ilyobacter tartaricus''
+
[[1yce]] - ATPase rotor ring – ''Ilyobacter tartaricus''
-
*''H/K transporting ATPase''
+
''H/K transporting ATPase''
-
**[[1iwc]], [[1iwf]] - pATPase NBD <br />
+
[[1iwc]], [[1iwf]] - pATPase NBD <br />
-
**[[3ixz]] - pATPase a+AlF4<br />
+
[[3ixz]] - pATPase a+AlF4<br />
-
**[[2xzb]] – pATPase subunits α, β<br />
+
[[2xzb]] – pATPase subunits α, β<br />
-
*''Mg+2 transporting ATPase''
+
''Mg+2 transporting ATPase''
-
**[[3gwi]] – EcATPase P-1 NBD
+
[[3gwi]] – EcATPase P-1 NBD
-
*''Arg/ornithine transporting ATPase''
+
''Arg/ornithine transporting ATPase''
-
**[[3md0]] – MtATPase+GDP – ''Mycobacterium tuberculosis''<br />
+
[[3md0]] – MtATPase+GDP – ''Mycobacterium tuberculosis''<br />
-
**[[1kmh]] - ATPase alpha subunit+tentoxin – spinach<br />
+
[[1kmh]] - ATPase alpha subunit+tentoxin – spinach<br />
-
**[[1h8e]] – cATPase+ADP+AlF4+ADP+SO4 - cow<br />
+
[[1h8e]] – cATPase+ADP+AlF4+ADP+SO4 - cow<br />
-
**[[1h8h]] - cATPase+ AMPPNP<br />
+
[[1h8h]] - cATPase+ AMPPNP<br />
-
**[[1efr]] - cATPase+efrapeptin<br />
+
[[1efr]] - cATPase+efrapeptin<br />
-
**[[3fks]] – yATPase <br />
+
[[3fks]] – yATPase <br />
-
**[[3ea0]] – ATPase ParA, fragment – ''Chlorobium tepidum''<br />
+
[[3ea0]] – ATPase ParA, fragment – ''Chlorobium tepidum''<br />
-
**[[2qen]] – ATPase (mutant) Walker-type – ''Pyrococcus abyssi''<br />
+
[[2qen]] – ATPase (mutant) Walker-type – ''Pyrococcus abyssi''<br />
-
**[[3cf0]], [[3cf1]], [[3cf3]] – mATPase NBD+ADP – mouse<br />
+
[[3cf0]], [[3cf1]], [[3cf3]] – mATPase NBD+ADP – mouse<br />
-
**[[3cf2]] - mATPase NBD+ADP+AMP-PNP<br />
+
[[3cf2]] - mATPase NBD+ADP+AMP-PNP<br />
-
**[[2r31]], [[2p4x]] – PdATPase ATP12 <br />
+
[[2r31]], [[2p4x]] – PdATPase ATP12 <br />
-
**[[2zd2]] – PdATPase (mutant) ATP12<br />
+
[[2zd2]] – PdATPase (mutant) ATP12<br />
-
**[[1d8s]] – EcATPase F1<br />
+
[[1d8s]] – EcATPase F1<br />
-
**[[1vdz]] – PhATPase subunit A – ''Pyrococcus horikoshii''<br />
+
[[1vdz]] – PhATPase subunit A – ''Pyrococcus horikoshii''<br />
*''Monosaccharide transporting ATPase''
*''Monosaccharide transporting ATPase''
-
**[[5dte]] – AsATPase – ''Actinobacillus succinogenes''<br />
+
**[[5dte]] – AsATPase – Actinobacillus succinogenes<br />
-
**[[5zjp]] – AsATPase + ribopyranose<br />
+
**[[4zjp]] – AsATPase + ribopyranose<br />
-
*'''RNA-dependent ATPase'''
+
===RNA-dependent ATPase===
-
**[[3eaq]], [[3i31]], [[3i32]] – TtATPase fragment<br />
+
[[3eaq]], [[3i31]], [[3i32]] – TtATPase fragment<br />
**[[4kbg]], [[4kbf]] - TtATPase helicase core domain<br />
**[[4kbg]], [[4kbf]] - TtATPase helicase core domain<br />
**[[5mao]] - TtATPase RRM domain <br />
**[[5mao]] - TtATPase RRM domain <br />
**[[4i69]], [[4i68]] - TtATPase RRM domain (mutant)<br />
**[[4i69]], [[4i68]] - TtATPase RRM domain (mutant)<br />
**[[4i67]] - TtATPase RRM domain + RNA<br />
**[[4i67]] - TtATPase RRM domain + RNA<br />
-
**[[3mwj]] – TtATPase N-terminal (mutant)<br />
+
[[3mwj]] – TtATPase N-terminal (mutant)<br />
-
**[[3mwk]], [[3nbf]] – TtATPase N-terminal + 8-oxo-AMP<br />
+
[[3mwk]], [[3nbf]] – TtATPase N-terminal + 8-oxo-AMP<br />
-
**[[3mwl]] - TtATPase N-terminal (mutant) + 8-oxoadenine<br />
+
[[3mwl]] - TtATPase N-terminal (mutant) + 8-oxoadenine<br />
-
**[[3nej]] - TtATPase reca-like domain (mutant)
+
[[3nej]] - TtATPase reca-like domain (mutant)
 +
 
 +
* DNA-dependent ATPase
 +
 
 +
**[[5tnu]] - ATPase – ''Sulfolobus tokodaii''<br />
*ATP-dependent ATPase
*ATP-dependent ATPase
Line 404: Line 426:
**[[5ji3]], [[5ji2]] – EcATPase subunits HSLU+HSLV<br />
**[[5ji3]], [[5ji2]] – EcATPase subunits HSLU+HSLV<br />
-
*'''Proteasome-associated ATPase'''
+
===Proteasome-associated ATPase===
-
**[[3fp9]], [[3m9b]], [[3m9h]] – MtATPase intern domain<br />
+
[[3fp9]], [[3m9b]], [[3m9h]] – MtATPase intern domain<br />
-
**[[3m91]], [[3m9d]] - MtATPase coiled coil domain + protein PUP<br />
+
[[3m91]], [[3m9d]] - MtATPase coiled coil domain + protein PUP<br />
-
**[[3kw6]] – hATPase 5
+
**[[5kzf]] – MtATPase residues 98-609<br />
 +
**[[5kwa]] – MtATPase residues 22-529<br />
 +
[[3kw6]] – hATPase 5<br />
 +
**[[6epf]], [[6epe]], [[6epd]], [[6epc]] – rATPase 6 + proteasome – Cryo EM<br />
-
*'''Transitional endoplasmic reticulum ATPase'''
+
===Transitional endoplasmic reticulum ATPase===
**[[5c19]] – hTer-ATPase (mutant) <br />
**[[5c19]] – hTer-ATPase (mutant) <br />
-
**[[3hu1]], [[3hu2]], [[3hu3]], [[5ftn]], [[5ftm]], [[5ftl]], [[5ftk]], [[5ftj]] – hTer-ATPase + ATPGS<br />
+
[[3hu1]], [[3hu2]], [[3hu3]], [[5ftn]], [[5ftm]], [[5ftl]], [[5ftk]], [[5ftj]] – hTer-ATPase + ATPGS<br />
**[[4ko8]], [[4kln]], [[5dyg]], [[5c18]] – hTer-ATPase (mutant) + ATPGS<br />
**[[4ko8]], [[4kln]], [[5dyg]], [[5c18]] – hTer-ATPase (mutant) + ATPGS<br />
**[[5dyi]] – hTer-ATPase + ADP<br />
**[[5dyi]] – hTer-ATPase + ADP<br />
**[[4kod]] – hTer-ATPase (mutant) + ADP<br />
**[[4kod]] – hTer-ATPase (mutant) + ADP<br />
-
**[[3qc8]], [[3qq8]], [[3qwz]] - hTer-ATPase N terminal + FAS-associated factor 1<br />
+
[[3qc8]], [[3qq8]], [[3qwz]] - hTer-ATPase N terminal + FAS-associated factor 1<br />
-
**[[3qq7]] - hTer-ATPase N terminal<br />
+
[[3qq7]] - hTer-ATPase N terminal<br />
-
**[[3tiw]] - hTer-ATPase N terminal + E3 ubiquitin-protein ligase peptide<br />
+
[[3tiw]] - hTer-ATPase N terminal + E3 ubiquitin-protein ligase peptide
**[[5c1b]] - hTer-ATPase N terminal + UFD1--SHP peptide<br />
**[[5c1b]] - hTer-ATPase N terminal + UFD1--SHP peptide<br />
**[[5glf]] - hTer-ATPase N terminal + derlin-1 peptide<br />
**[[5glf]] - hTer-ATPase N terminal + derlin-1 peptide<br />
Line 426: Line 451:
**[[5b6c]] - hTer-ATPase N terminal + ubiquitin fusion degradation protein<br />
**[[5b6c]] - hTer-ATPase N terminal + ubiquitin fusion degradation protein<br />
**[[5ifw]], [[5ifs]] - hTer-ATPase + tether containing UBX domain<br />
**[[5ifw]], [[5ifs]] - hTer-ATPase + tether containing UBX domain<br />
 +
**[[5x4l]] - hTer-ATPase + UBX domain-containing protein<br />
 +
**[[5kiy]], [[5kiw]] - hTer-ATPase (mutant) + Selenoprotein S<br />
**[[1s3s]] - mTer-ATPase ND1 domain + P47 C terminal<br />
**[[1s3s]] - mTer-ATPase ND1 domain + P47 C terminal<br />
-
**[[4rv0]] - Ter-ATPase N terminal + nuclear protein localization protein – ''Drosophila melanogaster''<br />
+
**[[4rv0]] - Ter-ATPase N terminal + nuclear protein localization protein – Drosophila melanogaster<br />
-
*'''LAO/AO transport system ATPase'''
+
* Sarcoplasmic/endoplasmic reticulum ATPase
-
**[[3nxs]] – ATPase – ''Mycobacterium smegmatis''
+
**[[5xa7]], [[5xa8]], [[5xa9]], [[5xaa]], [[5xab]] – rATPase <br />
 +
**[[5ncq]] – rATPase + ATP derivative + carbazole derivative<br />
 +
**[[5mpm]] – pATPase <br />
-
*'''DNA double-strand repair ATPase (Rad50)'''
+
===LAO/AO transport system ATPase===
-
**[[3aux]] – MjRad50 – ''Methanocaldococcus jannaschii''<br />
+
[[3nxs]] – ATPase – ''Mycobacterium smegmatis''
-
**[[3auy]] - MjRad50 + ADP<br />
+
 
-
**[[3av0]] - MjRad50 + ATP<br />
+
===DNA double-strand repair ATPase (Rad50)===
 +
 
 +
[[3aux]] – MjRad50 – ''Methanocaldococcus jannaschii''<br />
 +
[[3auy]] - MjRad50 + ADP<br />
 +
[[3av0]] - MjRad50 + ATP<br />
**[[5f3w]] - MjRad50 + MRE11 + ATPGS<br />
**[[5f3w]] - MjRad50 + MRE11 + ATPGS<br />
**[[5dny]] - MjRad50 + MRE11 + DNA<br />
**[[5dny]] - MjRad50 + MRE11 + DNA<br />
-
**[[3qg5]] – Rad50 NBD + MRE11 – ''Thermotoga maritima''<br />
+
[[3qg5]] – Rad50 NBD + MRE11 – ''Thermotoga maritima''<br />
-
**[[3qkr]], [[3qks]], [[3qf7]] - PfRad50 NBD + MRE11 – ''Pyrococcus furiosus''<br />
+
[[3qkr]], [[3qks]], [[3qf7]] - PfRad50 NBD + MRE11 – ''Pyrococcus furiosus''<br />
**[[4nck]], [[4nci]], [[4nch]] - PfRad50 NBD (mutant)<br />
**[[4nck]], [[4nci]], [[4nch]] - PfRad50 NBD (mutant)<br />
**[[4ncj]] - PfRad50 NBD (mutant) + BeF3 + ADP<br />
**[[4ncj]] - PfRad50 NBD (mutant) + BeF3 + ADP<br />
-
**[[3qkt]] - PfRad50 NBD + AMPPNP<br />
+
[[3qkt]] - PfRad50 NBD + AMPPNP<br />
-
**[[3qku]] - PfRad50 NBD + AMPPNP + MRE11
+
[[3qku]] - PfRad50 NBD + AMPPNP + MRE11
-
*'''MipZ ATPase'''
+
===MipZ ATPase===
-
**[[2xit]], [[2xj4]] – CcMipZ – ''Caulobacter crescentus''<br />
+
[[2xit]], [[2xj4]] – CcMipZ – ''Caulobacter crescentus''<br />
-
**[[2xj9]] – CcMipZ (mutant)
+
[[2xj9]] – CcMipZ (mutant)
-
* '''ATPase Rava'''
+
* ATPase Rava
**[[5fl2]], [[4upf]] – EcATPase LARA domain + lysine decarboxylase<br />
**[[5fl2]], [[4upf]] – EcATPase LARA domain + lysine decarboxylase<br />
**[[4upb]] – EcATPase + lysine decarboxylase – Cryo EM<br />
**[[4upb]] – EcATPase + lysine decarboxylase – Cryo EM<br />
 +
[[3nbx]] – EcATPase Rava + ADP
-
**[[3nbx]] – EcATPase Rava + ADP
+
'''FlaI ATPase'''
-
 
+
-
*'''FlaI ATPase'''
+
-
**[[4ihq]], [[4ii7]] – ATPase (mutant) – ''Sulfolobus acidocaldarius''<br />
+
[[4ihq]], [[4ii7]] – ATPase (mutant) – ''Sulfolobus acidocaldarius''<br />
*'''The RuvBL1/RuvBL2 complex (ATPase)'''
*'''The RuvBL1/RuvBL2 complex (ATPase)'''

Revision as of 09:33, 25 March 2018

An ATPase, Human RuvB-like 1 dodecamer complex with ADP (PDB code 2c9o)

Drag the structure with the mouse to rotate

Contents

3D Structures of ATPase

Updated on 25-March-2018

F1F0 ATPase α, β, γ, δ, ε subunits

4asu, 2jdi, 2jj1, 2jj2 - bF1-ATPS
2v7q, 1e79, 2ck3 - bF1-ATPS+inhibitor
2xnd, 2xok - bF1-ATPS+ATPS lipid-binding protein
2wpd, 2wss - yF1-ATPS+subunit 9+Mg+ADP+ATP - yeast
3oe7, 3oee, 3oeh, 3ofn - yF1-ATPS (mutant)
3fks, 3zry, 2hld - yF1-ATPS
3j0j – TtATPS α,β,γ,δ,ε,ζ - Cryo EM

F1F0 ATPase α, β, γ, ε subunits

3oaa – EcF1-ATPS (mutant)
1e79 - bF1-ATPS

F1F0 ATPase α,β,γ,δ,ε,9,B,D,6,O subunits

4b2q – yATPase – Cryo EM

1bmf - bF1-ATPS
3dze – bF1-ATPS subunit S
1cow - bF1-ATPS+aurovertin B
4f4s – yATPase subunit 9 + oligomycin

V-ATPase

V-ATPase subunit A

3i4l - PhATPS subunit A+AMPPNP
3mfy, 3m4y, 3nd8, 3nd9, 3p20, 3qg1, 3qia, 3qjy, 3sdz, 3se0, 5x09 - PhATPS subunit A (mutant)
3i72, 3i73, 3ikj - TtATPS subunit A (mutant)

V-ATPase subunit B

2c61 - MmATPS subunit B – Methanosarcina mazei
2rkw, 3b2q, 3ssa, 3tgw, 3tiv - MmATPS subunit B (mutant)
3dsr - MmATPS subunit B+ADP
3eiu - MmATPS subunit B+ATP

V-ATPase subunit C

1u7l, 3u2f, 3u2y, 3u32, 3ud0 - yATPS subunit C
3v3c - ATPS subunit C - pea
1ijp, 1l6t – EcF1-ATPS subunit C (mutant) – Escherichia coli - NMR
1r5z, 1v9m - TtATPS subunit C – Thermus thermophilus
3lg8 - MtATPS subunit C C-terminal
2w5j - sATPS subunit C - spinach
2wie, 2xqs, 2xqt, 2xqu - ATPS subunit C – Arthrospira platensis
3zk1, 3zk2 - ATPS subunit C – Fusobacterium nucleatum

V-ATPase subunit D+F

V-ATPase subunit E

2kz9 – yATPase subunit E
2dm9, 2dma, 4dt0 - PhATPS subunit E – Pyrococcus horikoshii
2kk7 - MjATPS subunit E – Methanocaldococcus jannaschii
3v6i – TtATPS subunit E + VAPC

V-ATPase subunit F

2qai - ATPS subunit F – Pyrococcus furiosus
2i4r - ATPS subunit F – Archaeoglobus fulgidus
2ov6 - MmATPS subunit F - NMR
2d00 - TtATPS subunit F
4ix9 – yATP subunit F (mutant)

V-ATPase subunit G

2k88 - yATPS subunit G residues 2-58 - NMR

V-ATPase subunit H

1ho8 – yATPS subunit H

V-ATPase subunit K

2bl2, 2cyd - EhATPS subunit K – Enterococcus hirae

V-ATPase subunit I

3rrk – ATPS subunit I N terminal – Meiothermus ruber

4dl0, 4efa - yATPase subunits C,G,E
3w3a - yATPS subunit A,B,D,F
3a5c, 3a5d - TtATPS subunit A,B,D,F
3gqb - TtATPS subunit A (mutant),B (mutant)
3k5b - TtATPS subunit E (mutant)+C

P-ATPase

Cu+2 transporting ATPase

2kmv, 2kmx, 2arf, 2koy – hATPase NBD – human – NMR
2kij - hATPase actuator domain – NMR
1yjr, 1yjt, 1yju, 1yjv - hATPase (mutant) 6th soluble domain – NMR
1y3j, 1y3k - hATPase 5th soluble domain – NMR
1s6o, 1s6u, 2lqb - hATPase 2nd soluble domain – NMR
1q8l - hATPase 2nd MBD – NMR
1aw0, 2aw0 - hATPase 4th MBD – NMR
1kvi, 1kvj - hATPase 1st MBD – NMR
3dxs - AtATPase RAN1 MBD (mutant) – Arabidopsis thaliana
3voy - AfATPase – Archaeoglobus fulgidus – CryoEM
3skx, 3sky - AfATPase NBD
2k1r - hATPase MBD+ ATOX1 – NMR
2rop, 2g9o, 2ga7 - hATPase MBD – NMR
2rml - BsATPase N-terminal – Bacillus subtilis – NMR
2gcf - sATPase N-terminal - Synechocystis – NMR
4a48 - sATPase
2iye - SsATPase catalytic domain – Sulfolobus solfataricus
2yj3 - SsATPase catalytic domain (mutant)
2yj4, 2yj5, 2yj6 - SsATPase catalytic domain (mutant) + nucleotide
1fvq, 1fvs - hATPase – NMR
3cjk – hATPase + Cu transporting protein ATX1
3rfu, 4bbj, 4bev, 4byg – LpATPase – Legionella pneumophila
4f2f - ATPase metal-binding domain – Streptococcus pneumonia
3j08, 3j09 - AfATPase
3a1c – AfATPase + AMPPCP
3a1d - AfATPase + ADP-Mg
3a1e - AfATPase (mutant) + AMPPCP

Na/K transporting ATPase

3a3y - SaATPase+K+ouabain – Squalus acanthias
3kdp, 3b8e – pATPase – pig
3n23 – pATPase + ouabain
3b8e - pATPase a+BeF3
2hc8 –AfATPase CopA A domain
2b8e - AfATPase CopA NBD
2xze - SaATPase
1mo8, 1mo7 - rATPase α-1 – rat
1q3i - pATPase NBD
4ret, 4res, 4hyt, 4hqj - pATPase subunits α,β,γ
2zxe - ATPase subunits α,β + phospholemman-like protein – spiny dogfish

Ca+2 transporting ATPase

3fgo - rATPase+CPA+AMPPCP – rabbit
3b9r, 1xp5 - rATPase+AlF4
1wpg - rATPase+MgF4
3w5b - rATPase+Mg
3w5c, 3w5d, 1iwo - rATPase
2zbe, 3b9b – rATPase+BeF3
2zbf - rATPase+BeF3+TG
2zbg - rATPase+AlF4+TG
2zbd, 3ar8 - rATPase+AlF4+nucleotide+Ca
3ar9 - rATPase+BeF3+nucleotide
2dqs, 3ar2, 1vfp, 4xou - rATPase+AMPPCP
2c88, 2c8k, 3ar4, 3ar3, 3ar5, 3ar7 - rATPase+nucleotide+TG
2ear, 2c8l - rATPase+TG
2agv - rATPase+TG+BHQ
4ycl - rATPase+CPA
2eat - rATPase+CPA+GT
3ar6 - rATPase+TNP-ADP+GT
2eau - rATPase+CPA+curcumin
3ba6 - rATPase phosphoenzyme intermediate
3fpb - rATPase+ATP+cyclopiazonic acid
3fps, 2oa0 - rATPase+ADP+cyclopiazonic acid
2o9j - rATPase+MgF4+cyclopiazonic acid
1kju, 3n5k - rATPase E2 state
2c9m - rATPase Ca2E1 state
1t5s, 3n8g - rATPase Ca2E1 state+AMPPCP
1t5t - rATPase Ca2E1 state+ADP+AlF4
1su4 - rATPase +2Ca2
2by4, 2yfy, 3nal, 3nam, 3nan, 4uu1, 4uu0, 4j2t, 5a3s - rATPase HNE2 state+thapsigargin derivative

Zn+2 transporting ATPase

2ofg, 2ofh - sATPase N-terminal – NMR

K+ transporting ATPase

2a00, 2a29 - EcATPase NBD of KdpB+AMPPNP– Escherichia coli – NMR
1svj, 1u7q - EcATPase NBD of KdpB – NMR
2ynr, 4ux2, 4ux1, 5y0b – pATPase – Cryo EM

As+ transporting ATPase

1ii0, 1f48 - EcATPase
1ihu – EcATPase+Mg+ADP+AlF3
1ii9 - EcATPase
3h84, 3idq, 3a36, 3a37 - yATPase GET3
3sja, 3sjb, 3sjc, 3sjd, 3zs8, 3zs9, 3b2e, 3vlc - yATPase GET3 + GET1 cystolic domain
3ibg - ATPase GET3 – Aspergillus fumigatus

H+ transporting ATPase

5ksd - AtATPase C terminal truncated
1mhs - ATPase – Neurospora crassa

Na+ transporting ATPase

2db4, 3aou - EhATPase subunit K – Enterococcus hirae
3aon - EhATPase subunits D,G
3vr2 - EhATPase subunits A,B
3vr4, 3vr5 - EhATPase subunits A,B,D,G
3vr3 - EhATPase subunits A,B + AMPPNP
3vr6 - EhATPase subunits A,B,D,G + AMPPNP
1yce - ATPase rotor ring – Ilyobacter tartaricus

H/K transporting ATPase

1iwc, 1iwf - pATPase NBD
3ixz - pATPase a+AlF4
2xzb – pATPase subunits α, β

Mg+2 transporting ATPase

3gwi – EcATPase P-1 NBD

Arg/ornithine transporting ATPase

3md0 – MtATPase+GDP – Mycobacterium tuberculosis
1kmh - ATPase alpha subunit+tentoxin – spinach
1h8e – cATPase+ADP+AlF4+ADP+SO4 - cow
1h8h - cATPase+ AMPPNP
1efr - cATPase+efrapeptin
3fks – yATPase
3ea0 – ATPase ParA, fragment – Chlorobium tepidum
2qen – ATPase (mutant) Walker-type – Pyrococcus abyssi
3cf0, 3cf1, 3cf3 – mATPase NBD+ADP – mouse
3cf2 - mATPase NBD+ADP+AMP-PNP
2r31, 2p4x – PdATPase ATP12
2zd2 – PdATPase (mutant) ATP12
1d8s – EcATPase F1
1vdz – PhATPase subunit A – Pyrococcus horikoshii

RNA-dependent ATPase

3eaq, 3i31, 3i32 – TtATPase fragment
3mwj – TtATPase N-terminal (mutant)
3mwk, 3nbf – TtATPase N-terminal + 8-oxo-AMP
3mwl - TtATPase N-terminal (mutant) + 8-oxoadenine
3nej - TtATPase reca-like domain (mutant)

Proteasome-associated ATPase

3fp9, 3m9b, 3m9h – MtATPase intern domain
3m91, 3m9d - MtATPase coiled coil domain + protein PUP
3kw6 – hATPase 5

Transitional endoplasmic reticulum ATPase

3hu1, 3hu2, 3hu3, 5ftn, 5ftm, 5ftl, 5ftk, 5ftj – hTer-ATPase + ATPGS
3qc8, 3qq8, 3qwz - hTer-ATPase N terminal + FAS-associated factor 1
3qq7 - hTer-ATPase N terminal
3tiw - hTer-ATPase N terminal + E3 ubiquitin-protein ligase peptide

LAO/AO transport system ATPase

3nxs – ATPase – Mycobacterium smegmatis

DNA double-strand repair ATPase (Rad50)

3aux – MjRad50 – Methanocaldococcus jannaschii
3auy - MjRad50 + ADP
3av0 - MjRad50 + ATP
3qg5 – Rad50 NBD + MRE11 – Thermotoga maritima
3qkr, 3qks, 3qf7 - PfRad50 NBD + MRE11 – Pyrococcus furiosus
3qkt - PfRad50 NBD + AMPPNP
3qku - PfRad50 NBD + AMPPNP + MRE11

MipZ ATPase

2xit, 2xj4 – CcMipZ – Caulobacter crescentus
2xj9 – CcMipZ (mutant)

3nbx – EcATPase Rava + ADP

FlaI ATPase

4ihq, 4ii7 – ATPase (mutant) – Sulfolobus acidocaldarius



References

  1. ↑ Gorynia S, Bandeiras TM, Pinho FG, McVey CE, Vonrhein C, Round A, Svergun DI, Donner P, Matias PM, Carrondo MA. Structural and functional insights into a dodecameric molecular machine - The RuvBL1/RuvBL2 complex. J Struct Biol. 2011 Sep 10. PMID:21933716 doi:10.1016/j.jsb.2011.09.001
Retrieved from "http://52.214.119.220/wiki/index.php/ATPase"
Personal tools