Sandbox Reserved 1482

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“Factor VIII” is an inactive form. The Factor VIII circulates in the bloodstream in this inactive form, bound to another molecule called [[Von Willebrand Factor]], until an injury that damages blood vessels occurs. Indeed, in plasma, factor VIII exists in two forms: free or as a complex with the von Willebrand factor. The complex is the predominant form and exists at a concentration of 0.1 µg/ml in the blood because factor VIII is stabilized by von Willebrand factor, while in its free state, it is rapidly cleaved by protease serines <sup>[8,14]</sup>.
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“Factor VIII” is an inactive form. The Factor VIII circulates in the bloodstream in this inactive form, bound to another molecule called [[Von Willebrand Factor]], until an injury that damages blood vessels occurs. Indeed, in plasma, factor VIII exists in two forms: free or as a complex with the von Willebrand factor. The complex is the predominant form and exists at a concentration of 0.1 µg/ml in the blood because factor VIII is stabilized by von Willebrand factor, while in its free state, it is rapidly cleaved by protease serines <ref name="wikipedia" /> <sup>[8,14]</sup>.
====The coagulation process====
====The coagulation process====
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In response to an injury, the coagulation factor VIII is separated from von Willebrand factor. The active form is called “Factor VIIIa” and is obtained by a proteolytic cleavage of the B-domain of Factor VIII by thrombin <sup>[8,9]</sup>. Then the two remaining chains are linked together thanks to a metal link (probably calcium ion) <ref name="Ngo" /> <sup>[9]</sup>.
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In response to an injury, the coagulation factor VIII is separated from von Willebrand factor. The active form is called “Factor VIIIa” and is obtained by a proteolytic cleavage of the B-domain of Factor VIII by thrombin <ref name="wikipedia" /> <sup>[8,9]</sup>. Then the two remaining chains are linked together thanks to a metal link (probably calcium ion) <ref name="Ngo" /> <sup>[9]</sup>.
Thus the factor VIIIa is a non-covalent dimer <ref name="Ngo" /> <sup>[9]</sup>.
Thus the factor VIIIa is a non-covalent dimer <ref name="Ngo" /> <sup>[9]</sup>.
It is the catalyst for the activation reaction of the factor X (to [[Factor Xa]]) by activated [[Factor IX]]a in the presence of calcium ion and phospholipids.
It is the catalyst for the activation reaction of the factor X (to [[Factor Xa]]) by activated [[Factor IX]]a in the presence of calcium ion and phospholipids.
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The factor X activation reaction by factor IXa is accelerated approximately 200,000 times when factor VIII interacts with factor IXa. <sup>[8,9,14]</sup>
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The factor X activation reaction by factor IXa is accelerated approximately 200,000 times when factor VIII interacts with factor IXa. <ref name="wikipedia" /> <sup>[8,9,14]</sup>
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Then, no longer protected by the von Willebrand factor, the factor VIIIa is proteolytically inactivated and quickly cleared from the blood stream, whereas, factor Xa becomes able (with the help of other factors) to stop the bleeding by forming a blood clot. <sup>[8,14]</sup>
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Then, no longer protected by the von Willebrand factor, the factor VIIIa is proteolytically inactivated and quickly cleared from the blood stream, whereas, factor Xa becomes able (with the help of other factors) to stop the bleeding by forming a blood clot. <ref name="wikipedia" /> <sup>[8,14]</sup>
== Structure ==
== Structure ==
====Primary Structure====
====Primary Structure====
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In humans, factor VIII is encoded by the F8 gene <sup>[1,2,9]</sup>. This gene maps on the most distant band of the long arm of the X-chromosome (region Xq28). It is 186 kb in size (0.1 % of the whole size of the chromosome) and contains 26 exons <sup>[4]</sup>.
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In humans, factor VIII is encoded by the F8 gene <sup>[1,2,9]</sup>. This gene maps on the most distant band of the long arm of the X-chromosome (region Xq28). It is 186 kb in size (0.1 % of the whole size of the chromosome) and contains 26 exons <ref name="Antonarakis" /> <sup>[4]</sup>.
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Factor VIII protein is composed of six globular domains: A<sub>1</sub>-A<sub>2</sub>-B-A<sub>3</sub>-C<sub>1</sub>-C<sub>2</sub> and contains one Ca<sup>2+</sup> and two Cu<sup>2+</sup> ions. It has a molecular weight of 330 kDa [1,9,14].
Factor VIII protein is composed of six globular domains: A<sub>1</sub>-A<sub>2</sub>-B-A<sub>3</sub>-C<sub>1</sub>-C<sub>2</sub> and contains one Ca<sup>2+</sup> and two Cu<sup>2+</sup> ions. It has a molecular weight of 330 kDa [1,9,14].
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The three A domains are homologous to the A domains of the copper-binding protein ceruloplasmin <sup>[8,14]</sup>. Together, they form a triangular heterotrimer where the A<sub>1</sub> and A<sub>3</sub> domains interact with the C<sub>2</sub> and C<sub>1</sub> domains, respectively <ref name="Ngo" /> <sup>[9]</sup>.
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The three A domains are homologous to the A domains of the copper-binding protein ceruloplasmin <ref name="wikipedia" /> <sup>[8,14]</sup>. Together, they form a triangular heterotrimer where the A<sub>1</sub> and A<sub>3</sub> domains interact with the C<sub>2</sub> and C<sub>1</sub> domains, respectively <ref name="Ngo" /> <sup>[9]</sup>.
The C domains belong to the phospholipid-binding discoidin domain family <ref name="wikipedia" /> <sup>[8]</sup>. They are adjacent at the base of the triangular heterotrimer. Moreover, C<sub>1</sub> and C<sub>2</sub> domains are structurally homologous and they have the ability to bind the membrane. Indeed, both C domain protrude three β-hairpin loops with hydrophobic and basic residues in the same direction. Thanks to these loops the factor VIII might interact with the phospholipid bilayer. <ref name="Ngo" /> <sup>[9]</sup>
The C domains belong to the phospholipid-binding discoidin domain family <ref name="wikipedia" /> <sup>[8]</sup>. They are adjacent at the base of the triangular heterotrimer. Moreover, C<sub>1</sub> and C<sub>2</sub> domains are structurally homologous and they have the ability to bind the membrane. Indeed, both C domain protrude three β-hairpin loops with hydrophobic and basic residues in the same direction. Thanks to these loops the factor VIII might interact with the phospholipid bilayer. <ref name="Ngo" /> <sup>[9]</sup>
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Factor VIIIa is obtained by cleavage and release of the B domain <sup>[8,9,11]</sup>. Although factor VIIIa can be formed from at least two cleavages involving Arg372 and Arg1689, fully factor VIIIa is obtained by a third cleavage at Arg740 <ref name="Ngo" /> <sup>[9]</sup>.
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Factor VIIIa is obtained by cleavage and release of the B domain <ref name="wikipedia" /> <sup>[8,9,11]</sup>. Although factor VIIIa can be formed from at least two cleavages involving Arg372 and Arg1689, fully factor VIIIa is obtained by a third cleavage at Arg740 <ref name="Ngo" /> <sup>[9]</sup>.
The two chain that result are a heavy and a light chains <sup>[2,9,14]</sup>.
The two chain that result are a heavy and a light chains <sup>[2,9,14]</sup>.
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The <scene name='80/802656/Heavy_chain/4'>heavy chain</scene> has a various size (90 or 120 kDa) <sup>[3,8]</sup>. It consists of the A<sub>1</sub>-A<sub>2</sub> domains <sup>[3,8,14]</sup>. Both A<sub>1</sub> and A<sub>2</sub> domains are built up of two connected β barrels <ref name="Ngo" /> <sup>[9]</sup>.
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The <scene name='80/802656/Heavy_chain/4'>heavy chain</scene> has a various size (90 or 120 kDa) <ref name="wikipedia" /> <sup>[3,8]</sup>. It consists of the A<sub>1</sub>-A<sub>2</sub> domains <ref name="wikipedia" /> <sup>[3,8,14]</sup>. Both A<sub>1</sub> and A<sub>2</sub> domains are built up of two connected β barrels <ref name="Ngo" /> <sup>[9]</sup>.
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The <scene name='80/802656/Light_chain/2'>light chain</scene> has a molecular weight of 80 kDa and is composed of 684 amino acids <sup>[3]</sup>. It contains two domains: a unique A domain of 371 amino acids and a duplicated C domain of 153 amino acids and 160 amino acids, respectively <sup>[3]</sup>. These domains are ranked in the following order A<sub>3</sub>-C<sub>1</sub>-C<sub>2</sub> <sup>[3,8]</sup>. It is composed of 42 % irregular structure, 36 % β-strands, and 22 % α-helices <sup>[3]</sup>. The C<sub>1</sub> and C<sub>2</sub> domains are defined by a distorted β barrel, while A<sub>3</sub>, as well as A<sub>1</sub> and A<sub>2</sub>, is composed of two connected β barrels <ref name="Ngo" /> <sup>[9]</sup>. This chain also contains of the major binding site of von Willebrand Factor at its N-terminus <sup>[3]</sup>.
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The <scene name='80/802656/Light_chain/2'>light chain</scene> has a molecular weight of 80 kDa and is composed of 684 amino acids <sup>[3]</sup>. It contains two domains: a unique A domain of 371 amino acids and a duplicated C domain of 153 amino acids and 160 amino acids, respectively <sup>[3]</sup>. These domains are ranked in the following order A<sub>3</sub>-C<sub>1</sub>-C<sub>2</sub> <ref name="wikipedia" /> <sup>[3,8]</sup>. It is composed of 42 % irregular structure, 36 % β-strands, and 22 % α-helices <sup>[3]</sup>. The C<sub>1</sub> and C<sub>2</sub> domains are defined by a distorted β barrel, while A<sub>3</sub>, as well as A<sub>1</sub> and A<sub>2</sub>, is composed of two connected β barrels <ref name="Ngo" /> <sup>[9]</sup>. This chain also contains of the major binding site of von Willebrand Factor at its N-terminus <sup>[3]</sup>.

Revision as of 22:32, 11 January 2019

This Sandbox is Reserved from 06/12/2018, through 30/06/2019 for use in the course "Structural Biology" taught by Bruno Kieffer at the University of Strasbourg, ESBS. This reservation includes Sandbox Reserved 1480 through Sandbox Reserved 1543.
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Coagulation Factor VIII (3cdz)

The human coagulation factor VIII

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References

↑[1] UniProtKB – P00451 (FA8_HUMAN) (https://www.uniprot.org/uniprot/P00451)

↑[2] Protein Database: 3CDZ. 2008 (http://www.rcsb.org/structure/3CDZ)

↑[3] Bihoreau N1, Fontaine-Aupart MP, Lehegarat A, Desmadril M, Yon JM. First determination of the secondary structure of purified factor VIII light chain. Biochem J. 1992 Nov 15; 288 ( Pt 1):35-40. PMID: 1445279.

↑[4] S. E. Antonarakis. Molecular genetics of coagulation factor VIII gene and haemophilia A. Thromb Haemost. 1995 Jul; 74(1):322-8. PMID: 8578479

↑[5] Rosendaal, F. R. (2001). Definitions in hemophilia, Recommendation of the scientific subcommittee on factor VIII and factor IX of the scientific and standardization committee of the International Society on Thrombosis and Haemostasis Factor VII and Factor IX Subcommittee.

↑[6] Barbara A Konkle, MD, Haley Huston, BS, and Shelley Nakaya Fletcher, BS. Hemophilia A, Synonym: Factor VIII Deficiency. Gene Rewiews. 2017 Jun 22.

↑[7] Srivastava, A., Brewer, A. K., Mauser‐Bunschoten, E. P., Key, N. S., Kitchen, S., Llinas, A., ... & Street, A. (2013). Guidelines for the management of hemophilia. Haemophilia, 19(1), e1-e47.

↑[8] Wikipedia, Factor VIII (https://en.wikipedia.org/wiki/Factor_VIII)

↑[9] Ngo JC, Huang M, Roth DA, Furie BC, Furie B. Crystal structure of human factor VIII: implications for the formation of the factor IXa-factor VIIIa complex. Structure. 2008 Apr; 16(4):597-606. doi: 10.1016/j.str.2008.03.001. PMID: 18400180

↑[10] Patek, A. J., & Taylor, F. H. L. (1937). Hemophilia. II. Some properties of a substance obtained from normal human plasma effective in accelerating the coagulation of hemophilic blood. The Journal of clinical investigation, 16(1), 113-124.

↑ [11] Toole, J. J., Pittman, D. D., Orr, E. C., Murtha, P., Wasley, L. C., & Kaufman, R. J. (1986). A large region (approximately equal to 95 kDa) of human factor VIII is dispensable for in vitro procoagulant activity. Proceedings of the National Academy of Sciences, 83(16), 5939-5942.

↑ [12] Ragni, M. V. (2018). Mimicking Factor VIII to Manage the Factor VIII–Deficient State. The New England journal of medicine, 379(9), 880-882.

↑ [13] Dallman, P. R., & Pool, J. G. (1968). Treatment of hemophilia with factor VIII concentrates. New England Journal of Medicine, 278(4), 199-202.

↑ [14] El Khorassani, M., & Benkirane Agoumi, N. (1996). Le facteur VIII coagulant. Médecine du Maghreb, 55, 11-13.

↑ [15] Ljung, R. C. (2018). Prevention and management of bleeding episodes in children with hemophilia. Pediatric Drugs, 1-10.

  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 Wikipedia, Factor VIII (https://en.wikipedia.org/wiki/Factor_VIII)
  2. 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 Ngo JC, Huang M, Roth DA, Furie BC, Furie B. Crystal structure of human factor VIII: implications for the formation of the factor IXa-factor VIIIa complex. Structure. 2008 Apr;16(4):597-606. PMID:18400180 doi:10.1016/j.str.2008.03.001
  3. 3.0 3.1 Antonarakis SE. Molecular genetics of coagulation factor VIII gene and hemophilia A. Thromb Haemost. 1995 Jul;74(1):322-8. PMID:8578479
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