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Dihydrofolate reductase 3D structures
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(New page: == 3D Structures of Dihydrofolate reductase == Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *DHFR **1ohk, [...)
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Revision as of 07:34, 10 June 2019
3D Structures of Dihydrofolate reductase
Updated on 10-June-2019 {{#tree:id=OrganizedByTopic|openlevels=0|
- DHFR
- 1ohk, 1ohj, 5dxv – hDHFR – different crystal forms - human
- 3f8y, 3f8z, 3f91, 3eig, 1dlr, 1dls – hDHFR (mutant)
- 3ia5 – MpDHFR – Mritella profunda
- 2kgk, 2qk8 – BaDHFR – Bacillus anthracis
- 3dfr – LcDHFR – Lactobacillus casei
- 2w9t – SaDHFR S1 - Staphylococcus aureus
- 2ith, 1vdr – HvDHFR - Haloferax volcanii
- 2rh2, 2gqv, 1vie, 1vif, 5dfr, 4p3q, 4p3r, 5z6f, 5z6j, 5z6k, 5z6l, 5z6m – EcDHFR – Escherichia coli
- 1dhi, 1dhj, 2d0k, 4p66, 4p68, 5ujx – EcDHFR (mutant)
- 3sfm – EcDHFR-2
- 1dyr – PncDHFR - Pneumocystis carinii
- 1zdr – BsDHFR – Bacillus stearothermophilus
- 1juv – DHFR – Bacteriophage T4
- 1ai9 – CaDHFR - Candida albicans
- 1cz3, 1d1g – DHFR – Thermotoga maritima
- 3q1h, 5fda – YpDHFR – Yersinia pestis
- 2l28 – DHFR – Lactobacillus casei - NMR
- 3vco – DHFR – Schistosoma mansoni
- 1ohk, 1ohj, 5dxv – hDHFR – different crystal forms - human
- DHFR-Thymidine synthase (TS) complex
- 3cl9, 2h2q, 3qfx – TcDHFR-TS - Trypanosoma cruzi
- 1qzf - ChTcDHFR-TS – Cryptosporidium hominis
- 3dl5, 3dl6, 2oip – ChDHFR-TS (mutant)
- 3i3r, 3kjr - BbDHFR-TS – Babesia bovis
- 3clb – TcDHFR-TS + TMX
- 3irm, 3iro - TcDHFR-TS + inhibitor
- 3irn - TcDHFR-TS+NADPH +inhibitor
- 3inv - TcDHFR-TS+NADPH+dUMP+inhibitor
- 5t7o - TcDHFR-TS+NADPH+dUMP + folate derivative
- 3kjs, 3rg9 - TcDHFR-TS+NADPH +inhibitor
- 3hbb – TcDHFR-TS+MTX & TMTX
- 3dg8, 1j3i, 3dga, 3qgt, 6a2k, 6a2m, 6a2o - PfDHFR-TS+NADPH +dUMP+inhibitor – Plasmodium falciparum
- 1j3k, 1j3j, 3jsu, 6a2l, 6a2n, 6a2p - PfDHFR-TS (mutant)+NADPH+dUMP+ inhibitor
- 3qg2 - PfDHFR-TS (mutant)+NADPH + inhibitor
- 3um5, 3um6, 4dp3 - PfDHFR-TS (mutant)+NADPH + dUMP + anti-malarial drug
- 3um8, 4dph - PfDHFR-TS + NADPH + anti-malarial drug
- 4dpd - PfDHFR-TS +NADPH + dUMP + folate
- 3k2h, 3nrr - BbDHFR-TS+NADPH+dUMP+inhibitor
- 2bl9, 2bla, 2blb, 2blc – PvDHFR-TS+ anti-malarial drug – Plasmodium vivax
- 4eck, 4eil - TgDHFR-TS + NADPH + dUMP + folate – Toxoplasma gondii
- 4ky4, 4kya - TgDHFR-TS + NADPH + dUMP + aminopterin
- 5t0l, 6n1t - TgDHFR-TS + NADPH + dUMP + folate derivative + inhibitor
- 3hj3 - ChDHFR-TS + NADPH + dUMP + MTX
- 4ky8, 4q0d, 4q0e - ChDHFR-TS + NADPH + dUMP + MTX + pyrimidine derivative
- 6aog, 6aoh, 6aoi - TgDHFR-TS + NADPH + dUMP + folate derivative + inhibitor
- 6n1s - TgDHFR-TS (mutant) + NADPH + dUMP + folate derivative + inhibitor
- 1e26 - PcDHFR-TS+NADP+folate - Plasmodium carinii
- 1qzf - ChTcDHFR-TS – Cryptosporidium hominis
- 3dl5, [[3dl6, [[2oip – ChDHFR-TS (mutant)
- 3hj3 - ChDHFR-TS + NADPH + dUMP + MTX
- 4ky8, 4q0d, 4q0e - ChDHFR-TS + NADPH + dUMP + MTX + pyrimidine derivative
- 3i3r, 3kjr - BbDHFR-TS – Babesia bovis
- 3k2h, 3nrr - BbDHFR-TS+NADPH+dUMP+inhibitor
- 3cl9, 2h2q, 3qfx – TcDHFR-TS - Trypanosoma cruzi
- DHFR+antifolate inhibitors
- Binary complexes
- 1s3u, 1s3v, 1s3w – hDHFR+tetrahydroauinazoline
- 1mvs, 1mvt, 1pd8, 1pd9, 1pdb, 1mvs, 1mvt, 3fs6, 1hfp, 1hfq, 1hfr, 2c2s, 2c2t, 2w3b, 3gyf, 3nxo, 3nxr, 3nxt, 3nxv, 3nu0, 4g95 – hDHFR+pyrimidine derivatives
- 3s7a - hDHFR+ inhibitor
- 3l3r, 3gi2, 3ghc, 3ghv, 3ghw, 3oaf – hDHFR (mutant)+pyrimidine derivatives
- 3n0h, 3s3v – hDHFR (mutant) +TMP
- 3fra – SaDHFR (mutant)+iclaprim
- 3sqy, 3sr5, 3srq, 3srr, 3srs, 3sru, 3srw, 4fgg, 4fgh – SaDHFR + inhibitor
- 2w9h – SaDHFR+TMP
- 3fl8 – BaDHFR+RAB1
- 3fl9 – BaDHFR+TMP
- 4elb, 4ele, 4elf, 4elg, 4elh – BaDHFR + inhibitor
- 2hm9 – LcDHFR+TMP
- 1ao8 - LcDHFR+MTX – NMR
- 1dis, 1diu - LcDHFR+ brodimoprim – NMR
- 1dra, 1drb, 2drc, 3drc, 1dds, 4dfr - EcDHFR+MTX
- 2inq – EcDHFR+MTX – neutron diffraction
- 1rx5, 3och, 6cqa, 6nxz, 6ny0 - EcDHFR+ inhibitor
- 4eig, 4eiz – EcDHFR + antibody fragment
- 2cig – MtDHFR+isoniazid derivative – Mycobacterium tuberculosis
- 4klx - MtDHFR + ADP
- 3tq8 - CbDHFR+TMP – Coxiella burnetii
- 3tq9 – CbDHFR + MTX
- 4qi9, 5hi6 - YpDHFR + MTX
- 1s3u, 1s3v, 1s3w – hDHFR+tetrahydroauinazoline
- Ternary complexes with pyrimidine derivative
- 4ddr, 4kak, 4kbn, 4kd7, 4keb, 4kfj, 4qhv, 4qjc, 5hpb, 5hqy, 5hqz, 5hsr, 5hsu, 5ht4, 5ht5, 5hui, 5hvb, 5hve, 1kms, 1kmv, 3ntz, 3nxx, 3nxy, 6a7c, 6a7e, 6de4 – hDHFR + NADPH + pyrimidine inhibitor
- 3sgy, 3sh2, 4tu5, 4xe6, 4xec, 5hf0, 5hf2, 5jg0, 6e4e - SaDHFR +NADP+ pyrimidine derivative
- 3i8a, 3f0q, 3f0s, 3f0v, 3f0x, 3f0b, 3f0u, 3fq0, 3fqc, 3fqf, 3fqo, 3fqv, 3fqz, 3lg4, 5isp, 5isq, 5ist – SaDHFR (mutant)+NADPH+ pyrimidine derivative
- 2w3w – MaDHFR+NADPH+ pyrimidine derivative
- 3e0b, 3jvx, 3jwc, 3jwf, 3jwk, 3jwm – BaDHFR (mutant)+NADP+ pyrimidine derivative
- 3cse, 3eej, 3eek, 3eel, 3eem, 4h98, 4hog, 3qlx - CgDHFR +NADPH+ pyrimidine derivatives – Candida glabrata
- 1daj, 3nz6, 3nz9, 3nzb, 3nzc, 3nzd, 4ixe, 4qjz – PcDHFR + NADPH + pyrimidine derivative
- 4ixf, 4ixg – PcDHFR (mutant) + NADPH + pyrimidine derivative
- 1ly4, 3td8 - PcDHFR +NAP+pyrimidine derivative
- 4h95, 4h96, 4h97, 4hoe, 4hof - CaDHFR + NADPH + pyrimidine derivative
- 4km0 – MtDHFR + ADP + pyrimidine derivative
- 5ja3, 5u26, 5u27, 5ujf, 6ddp, 6dds, 6ddw – MtDHFR + NADP + pyrimidine derivative
- 3nza - PncDHFR+NADPH+ pyrimidine derivative
- 4m7v - EfDHFR +NADPH + pyrimidine derivative - Enterococcus faecalis
- 4or7, 4osg, 5ecc, 5ecx - DHFR +NADPH + pyrimidine derivative – Klebsiella pneumoniae
- 6cxm - MsDHFR +NADPH + pyrimidine derivative – Mycobacterium smegmatis
- 4ddr, 4kak, 4kbn, 4kd7, 4keb, 4kfj, 4qhv, 4qjc, 5hpb, 5hqy, 5hqz, 5hsr, 5hsu, 5ht4, 5ht5, 5hui, 5hvb, 5hve, 1kms, 1kmv, 3ntz, 3nxx, 3nxy, 6a7c, 6a7e, 6de4 – hDHFR + NADPH + pyrimidine inhibitor
- Ternary complexes with quinazoline derivative
- 4lae, 4lag, 4lah, 4lek - SaDHFR +NADPH+ quinazoline derivative
- 3qyl, 3qyo, 3r33, 3kfy - EcDHFR +NADPH+quinazoline derivative
- 1ly3, 1s3y – PcDHFR +NAP+quinazoline derivative
- 1boz – hDHFR (mutant)+NADPH+quinazoline derivative
- 1m79, 1m78, 1m7a, 1ia1, 1ia2, 1ia3, 1ia4, 1aoe – CaDHFR+NADPH+quinazoline derivative
- 1sej - ChDHFR +NADPH+quinazoline derivative+deoxyuridine
- 4lae, 4lag, 4lah, 4lek - SaDHFR +NADPH+ quinazoline derivative
- Ternary complexes with TMP
- 2w9g - SaDHFR+ TMP +NADPH
- 3fre, 2w9s, 3frb – SaDHFR (mutant)+TMP+NADPH
- 4g8z - DHFR (mutant)+TMP+NADPH – Pneumocystis jirovecii
- 2w3v – MaDHFR +TMP+NADPH – Mycobacterium avium
- 3jw3, 3jw5 – BaDHFR (mutant)+ TMP +NADPH
- 3s9u, 3sa1, 3sa2, 3sai – BaDHFR (mutant) +TMP analog + NADP
- 1lud - LcDHFR+NADPH+ TMP – NMR
- 2fzi, 2fzj - mDHFR+NADPH+ TMP
- 2fzh – PcDHFR+NADPH+ TMP
- 2w3a – hDHFR +TMP+NADPH
- 1yho - hDHFR+NADPH+ TMP – NMR
- 1dg5 - MtDHFR + TMP +NADPH
- 4km2 - MtDHFR + ADP + TMP
- 2w9g - SaDHFR+ TMP +NADPH
- Ternary complexes with MTX
- 3ia4 – MpDHFR+ MTX +NADPH
- 3dat - BaDHFR+ MTX+NADPH
- 1bzf - LcDHFR+NADPH+ TMX – NMR
- 1u70 – mDHFR (mutant)+MTX+NADPH
- 1dre, 1rb3, 1rg7, 1rh3, 1ra3, 1rx3, 3dau, 4gh8 - EcDHFR+NADP+MTX
- 1ddr - EcDHFR+MTX+urea
- 1tdr - EcDHFR+MTX+Te
- 1u71, 1u72 - hDHFR (mutant)+MTX+NADPH
- 1df7 - MtDHFR +MTX+NADPH
- 3ix9 – DHFR (mutant) +MTX+NADPH – Streptococcus pneumoniae
- 3ia4 – MpDHFR+ MTX +NADPH
- Other ternary complexes
- 3m08 - SaDHFR+RAB1+NADP
- 3m09 – SaDHFR (mutant)+RAB1+NADP
- 3fy8, 3fyw – SaDHFR + AR-101+NADPH
- 3fy9 – SaDHFR (mutant)+ AR-102+NADPH
- 3fyv – SaDHFR (mutant)+ AR-102+NADPH
- 3fyw – SaDHFR + AR-101+NADPH
- 3frf – SaDHFR (mutant)+iclaprim+NADPH
- 3k45, 3k47 – mDHFR+E & Z-isomer+NADPH – mouse
- 3d80, 3d84 – mDHFR+NADPH+ pteridin derivative
- 2ano, 2anq - EcDHFR+NADPH+MS-SH08-17
- 5uih - EcDHFR+NADP + drug
- 5uii – EcDHFR (mutant) + NADP + drug
- 1vj3 – PcHDFR+TAB+NADPH
- 4m2x - MtDHFR + trimetrexate +NADPH
- 4kne - MtDHFR + ADP + anti-folate drug
- 1dg7 - MtDHFR + 4-Br-WR99210 +NADPH
- 1dr1, 1dr2, 1dr3 - cDHFR+NADP+biopterin – chicken
- 1dr4, 1dr5, 1dr6, 1dr7 - cDHFR+NADP+biopterin+Hg
- 1klk – DHFR+NADPH+PT653 – rat
- 3m08 - SaDHFR+RAB1+NADP
- DHFR higher complexes
- DHFR+ligands
- 2w3m, 4m6k, 6dav – hDHFR +folate+NADPH
- 1drf - hDHFR +folate
- 1dhf, 2dhf – hDHFR+folate+5-deazofolate
- 4m6l - hDHFR+folate+ NADPH + folate derivative
- 1e26 - PcDHFR-TS+NADP+folate
- 2jyb – HvDHFR+folate
- 2rk1 – EcDHFR+NADP+dihydrofolate
- 7dfr - EcDHFR+NAP+NADP+folate
- 1ra8, 1rx8, 1rx4 – EcDHFR+folate+ ADP derivative
- 1rb2, 1rx2, 1ra2, 3ql3, 4kjj, 4kjk, 4nx6, 4nx7, 4pss, 4pst, 4psy, 4pth, 4ptj, 4rgc, 4x5f, 4x5g, 4x5h, 4x5i, 4x5j, 1dyl - EcDHFR+folate +NADP
- 4pdj - EcDHFR+folate+NADP – Neutron
- 5cc9, 5ccc, 1rc4, 1dyj, 1dyh, 1rx6, 6cyv - EcDHFR+folate derivative +NADP
- 3ql0, 4kjl, 4qle, 4qlf, 4qlg – EcDHFR (mutant) +folate+NADP
- 1rx7, 1rd7, 1re7, 5e8q, 5eaj,1dyi, 1rf7, 6cw7, 6cxk, 1jol, 1jom, 6mr9 - EcDHFR+folate derivative
- 1drh, 6mt8, 6mth - EcDHFR+ folate+folate derivative
- 4ej1, 4fhb – EcDHFR + antibody fragment + folate
- 3jtw – DHFR + ligand – Pediococcus pentosaceus
- 2cd2, 3cd2, 4cd2 - PcDHFR+NADP+folate
- 1cd2 - PcHDFR+folate+NADPH
- 2zza – MpDHFR+ folate +NADP
- 3tqb – CbDHFR + NADPH + folate
- 3frd – SaDHFR (mutant)+folate +NADP
- 2w3m, 4m6k, 6dav – hDHFR +folate+NADPH
- DHFR+co-factors
- 2hqp, 2lf1 – LcDHFR+NADPH – NMR
- 2rk2, 2p4t, 1ra9, 1rx9 – EcDHFR+NADP
- 1rx1, 1ra1 - EcDHFR+NADPH
- 5w3q - EcDHFR (mutant) +NADPH
- 6dfr - EcDHFR+NAP+NADP
- 1dg8, 4kl9 - MtDHFR +NADPH
- 8dfr - cDHFR +NADPH
- 3tqa – CbDHFR + NADPH
- 4m6j - hDHFR +NADPH
- 2xw7 - DHFR +NADPH – Mycobacterium smegmatis
- 4m7u - EfDHFR +NADPH
- 4q67 - SaDHFR +NADPH
- 4q6a - SaDHFR (mutant) +NADPH
- 2hqp, 2lf1 – LcDHFR+NADPH – NMR
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